BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem202k10 (1638 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048337.1| Oryza sativa (japonica cultivar-group) Os01g... 650 0.0 dbj|AK102802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 642 e-180 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 337 9e-89 dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic D... 337 9e-89 ref|NM_001061113.1| Oryza sativa (japonica cultivar-group) Os05g... 274 1e-69 >ref|NM_001048337.1| Oryza sativa (japonica cultivar-group) Os01g0111200 (Os01g0111200) mRNA, complete cds Length = 2355 Score = 650 bits (328), Expect = 0.0 Identities = 524/590 (88%), Gaps = 12/590 (2%) Strand = Plus / Plus Query: 185 cggcggcggggcggcctcgccggagtcgtacatcgggagtctcatcagcctgacctccaa 244 |||||| | ||||||||||||||| |||||||||||||| |||||||| |||| ||||| Sbjct: 133 cggcggggcggcggcctcgccggactcgtacatcgggagcctcatcagtttgacatccaa 192 Query: 245 aagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 304 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 252 Query: 305 cttgcgcaatgtgcgatcatttggaaccgaagggcggaagaaagacgggatgcagatccc 364 |||||||||||| ||||||||||||||||||||||| |||||||| || |||| || || Sbjct: 253 cttgcgcaatgttcgatcatttggaaccgaagggcgcaagaaagatggagtgcaaattcc 312 Query: 365 tgctagcgacaaagtttacgagtacatcctctttaggggaagtgatatcaaggatttgca 424 ||||||| ||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 313 tgctagcaccaaagtttatgagtacatacttttccggggaagtgatatcaaggatttgca 372 Query: 425 agttaaatcatcac---------cgccgacaccgcaaccagcccccctgcacaatgatcc 475 |||||| ||||||| |||| |||| |||||||| ||| |||||||||||| Sbjct: 373 agttaagtcatcaccacctccaccgccaccaccacaaccagctgccccgcacaatgatcc 432 Query: 476 tgccataatccagtcacattattctcaaccagcatcgacttcttcaagtttgccttctgc 535 ||||||||| ||||| || || ||||| ||||||||| |||||||||||||||||||||| Sbjct: 433 tgccataatacagtcgcactactctcagccagcatcggcttcttcaagtttgccttctgc 492 Query: 536 tgggggtgcagtttttccagacctcagctcccaggcagctcaatatgggcttcagaggcc 595 ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 tggaagtgcagtattgccagacctcagctcccaggcagctcaatatgggcttcagaggcc 552 Query: 596 aagttttcagagcaatattcctctatatcaaccggggagtgctccgtggggatcttctgc 655 ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||| Sbjct: 553 aagttttcagagcaatattcctctatatcaacctgggagtgttccatggggatcctctgc 612 Query: 656 tccacctcctgctggaagtgcttcagcgctttcagttcctccggtgtactggcagggata 715 ||||||| ||||||||| ||| |||| ||||||||||| || |||| ||||||||||| Sbjct: 613 tccaccttctgctggaaatgcatcaggcctttcagttcccccaatgtattggcagggata 672 Query: 716 ctatgcaccttcaggtgggcttccacctcatttgcagcaacctcctttgc 765 ||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 673 ttatccacct---ggtgggcttccacctcatttgcagcaacctcctttgc 719 >dbj|AK102802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108G08, full insert sequence Length = 2358 Score = 642 bits (324), Expect = e-180 Identities = 523/590 (88%), Gaps = 12/590 (2%) Strand = Plus / Plus Query: 185 cggcggcggggcggcctcgccggagtcgtacatcgggagtctcatcagcctgacctccaa 244 |||||| | ||||||||||||||| |||||||||||||| |||||||| |||| ||||| Sbjct: 134 cggcggggcggcggcctcgccggactcgtacatcgggagcctcatcagtttgacatccaa 193 Query: 245 aagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 304 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 253 Query: 305 cttgcgcaatgtgcgatcatttggaaccgaagggcggaagaaagacgggatgcagatccc 364 |||||||||||| ||||||||||||||||||||||| |||||||| || |||| || || Sbjct: 254 cttgcgcaatgttcgatcatttggaaccgaagggcgcaagaaagatggagtgcaaattcc 313 Query: 365 tgctagcgacaaagtttacgagtacatcctctttaggggaagtgatatcaaggatttgca 424 ||||||| ||||||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 314 tgctagcaccaaagtttatgagtacatacttttccggggaagtgatatcaaggatttgca 373 Query: 425 agttaaatcatcac---------cgccgacaccgcaaccagcccccctgcacaatgatcc 475 |||||| ||||||| |||| |||| |||||||| ||| |||||||||||| Sbjct: 374 agttaagtcatcaccacctccaccgccaccaccacaaccagctgccccgcacaatgatcc 433 Query: 476 tgccataatccagtcacattattctcaaccagcatcgacttcttcaagtttgccttctgc 535 ||||||||| ||||| || || ||||| ||||||||| |||||||||||||||||||||| Sbjct: 434 tgccataatacagtcgcactactctcagccagcatcggcttcttcaagtttgccttctgc 493 Query: 536 tgggggtgcagtttttccagacctcagctcccaggcagctcaatatgggcttcagaggcc 595 ||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tggaagtgcagtattgccagacctcagctcccaggcagctcaatatgggcttcagaggcc 553 Query: 596 aagttttcagagcaatattcctctatatcaaccggggagtgctccgtggggatcttctgc 655 |||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| ||||| Sbjct: 554 aagtgttcagagcaatattcctctatatcaacctgggagtgttccatggggatcctctgc 613 Query: 656 tccacctcctgctggaagtgcttcagcgctttcagttcctccggtgtactggcagggata 715 ||||||| ||||||||| ||| |||| ||||||||||| || |||| ||||||||||| Sbjct: 614 tccaccttctgctggaaatgcatcaggcctttcagttcccccaatgtattggcagggata 673 Query: 716 ctatgcaccttcaggtgggcttccacctcatttgcagcaacctcctttgc 765 ||| ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 674 ttatccacct---ggtgggcttccacctcatttgcagcaacctcctttgc 720 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 337 bits (170), Expect = 9e-89 Identities = 244/268 (91%), Gaps = 3/268 (1%) Strand = Plus / Plus Query: 498 tctcaaccagcatcgacttcttcaagtttgccttctgctgggggtgcagtttttccagac 557 ||||| ||||||||| ||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 589249 tctcagccagcatcggcttcttcaagtttgccttctgctggaagtgcagtattgccagac 589308 Query: 558 ctcagctcccaggcagctcaatatgggcttcagaggccaagttttcagagcaatattcct 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589309 ctcagctcccaggcagctcaatatgggcttcagaggccaagttttcagagcaatattcct 589368 Query: 618 ctatatcaaccggggagtgctccgtggggatcttctgctccacctcctgctggaagtgct 677 ||||||||||| ||||||| ||| |||||||| |||||||||||| ||||||||| ||| Sbjct: 589369 ctatatcaacctgggagtgttccatggggatcctctgctccaccttctgctggaaatgca 589428 Query: 678 tcagcgctttcagttcctccggtgtactggcagggatactatgcaccttcaggtgggctt 737 |||| ||||||||||| || |||| ||||||||||| ||| ||||| ||||||||| Sbjct: 589429 tcaggcctttcagttcccccaatgtattggcagggatattatccacct---ggtgggctt 589485 Query: 738 ccacctcatttgcagcaacctcctttgc 765 |||||||||||||||||||||||||||| Sbjct: 589486 ccacctcatttgcagcaacctcctttgc 589513 Score = 196 bits (99), Expect = 2e-46 Identities = 123/131 (93%) Strand = Plus / Plus Query: 185 cggcggcggggcggcctcgccggagtcgtacatcgggagtctcatcagcctgacctccaa 244 |||||| | ||||||||||||||| |||||||||||||| |||||||| |||| ||||| Sbjct: 588049 cggcggggcggcggcctcgccggactcgtacatcgggagcctcatcagtttgacatccaa 588108 Query: 245 aagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 304 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588109 gagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 588168 Query: 305 cttgcgcaatg 315 ||||||||||| Sbjct: 588169 cttgcgcaatg 588179 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Plus Query: 796 ccgacgaagaggatcaacatggcagggatcaaagtacacgaatggtttcaggaggactat 855 |||| ||||||||||||||| ||||||||||||| || || ||||||||| |||| || Sbjct: 10624220 ccgatgaagaggatcaacatagcagggatcaaagagcatgagtggtttcagaaggattac 10624279 Query: 856 attcctgttgttccatatgacgatgatgatgac 888 | ||||||||||||||||||||| ||||||||| Sbjct: 10624280 actcctgttgttccatatgacgacgatgatgac 10624312 Score = 95.6 bits (48), Expect = 5e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 318 cgatcatttggaaccgaagggcggaagaaagacgggatgcagatccctgctagcgacaaa 377 ||||||||||||||||||||||| |||||||| || |||| || ||||||||| |||| Sbjct: 588508 cgatcatttggaaccgaagggcgcaagaaagatggagtgcaaattcctgctagcaccaaa 588567 Query: 378 gtttacgagtacatcctctttaggggaagtgatatcaagg 417 ||||| |||||||| || || |||||||||||||||||| Sbjct: 588568 gtttatgagtacatacttttccggggaagtgatatcaagg 588607 >dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 337 bits (170), Expect = 9e-89 Identities = 244/268 (91%), Gaps = 3/268 (1%) Strand = Plus / Plus Query: 498 tctcaaccagcatcgacttcttcaagtttgccttctgctgggggtgcagtttttccagac 557 ||||| ||||||||| ||||||||||||||||||||||||| ||||||| || |||||| Sbjct: 63854 tctcagccagcatcggcttcttcaagtttgccttctgctggaagtgcagtattgccagac 63913 Query: 558 ctcagctcccaggcagctcaatatgggcttcagaggccaagttttcagagcaatattcct 617 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63914 ctcagctcccaggcagctcaatatgggcttcagaggccaagttttcagagcaatattcct 63973 Query: 618 ctatatcaaccggggagtgctccgtggggatcttctgctccacctcctgctggaagtgct 677 ||||||||||| ||||||| ||| |||||||| |||||||||||| ||||||||| ||| Sbjct: 63974 ctatatcaacctgggagtgttccatggggatcctctgctccaccttctgctggaaatgca 64033 Query: 678 tcagcgctttcagttcctccggtgtactggcagggatactatgcaccttcaggtgggctt 737 |||| ||||||||||| || |||| ||||||||||| ||| ||||| ||||||||| Sbjct: 64034 tcaggcctttcagttcccccaatgtattggcagggatattatccacct---ggtgggctt 64090 Query: 738 ccacctcatttgcagcaacctcctttgc 765 |||||||||||||||||||||||||||| Sbjct: 64091 ccacctcatttgcagcaacctcctttgc 64118 Score = 196 bits (99), Expect = 2e-46 Identities = 123/131 (93%) Strand = Plus / Plus Query: 185 cggcggcggggcggcctcgccggagtcgtacatcgggagtctcatcagcctgacctccaa 244 |||||| | ||||||||||||||| |||||||||||||| |||||||| |||| ||||| Sbjct: 62654 cggcggggcggcggcctcgccggactcgtacatcgggagcctcatcagtttgacatccaa 62713 Query: 245 aagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 304 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62714 gagcgagatcaggtacgagggcatcctctacaacatcaacaccgaggagtccagcatcgg 62773 Query: 305 cttgcgcaatg 315 ||||||||||| Sbjct: 62774 cttgcgcaatg 62784 Score = 95.6 bits (48), Expect = 5e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 318 cgatcatttggaaccgaagggcggaagaaagacgggatgcagatccctgctagcgacaaa 377 ||||||||||||||||||||||| |||||||| || |||| || ||||||||| |||| Sbjct: 63113 cgatcatttggaaccgaagggcgcaagaaagatggagtgcaaattcctgctagcaccaaa 63172 Query: 378 gtttacgagtacatcctctttaggggaagtgatatcaagg 417 ||||| |||||||| || || |||||||||||||||||| Sbjct: 63173 gtttatgagtacatacttttccggggaagtgatatcaagg 63212 >ref|NM_001061113.1| Oryza sativa (japonica cultivar-group) Os05g0136200 (Os05g0136200) mRNA, complete cds Length = 1671 Score = 274 bits (138), Expect = 1e-69 Identities = 264/306 (86%) Strand = Plus / Plus Query: 891 tgacgatgaagatgtacagcttggtgcagttcttccagtgaaagagcaaatcaatgaagc 950 ||||||||||||||||||| |||| ||| |||||| | ||||||||||||||||| | Sbjct: 922 tgacgatgaagatgtacagtttggggcacgtcttcctgccaaagagcaaatcaatgatga 981 Query: 951 acctggggacaatactactcatcagatcaacgcttttcaattgattggaatggcatcttc 1010 ||||| || || | | ||||||||||||||||||| || ||||||||||||||||| || Sbjct: 982 gcctggagataagaattctcatcagatcaacgctttccagttgattggaatggcatcatc 1041 Query: 1011 tctcgatctttctggttttttcgaggaagaggaagtgtcccaaaggaaggtcagattcac 1070 || |||||||| || ||||||||||| ||||||||||||||||||| | | |||||||| Sbjct: 1042 ccttgatctttcagggtttttcgaggatgaggaagtgtcccaaaggaggattagattcac 1101 Query: 1071 atcaacacacccacccaaggatttgttcgacaaaattgaaagctccgcgactgagttggg 1130 |||||| || |||||||||||| |||||||| ||||||||||| ||||| |||||||| Sbjct: 1102 atcaacgcatccacccaaggatgccttcgacaagattgaaagctcagcgacggagttggg 1161 Query: 1131 gttcgaagttcagagggggcatagcaagctcaaagtaatgcgcaactgcaacagatcgaa 1190 ||| |||||||||||||||| |||||||||||| |||||||||| ||||| |||| || Sbjct: 1162 attccaagttcagagggggcacagcaagctcaaattaatgcgcaattgcaagggatcaaa 1221 Query: 1191 gaaccc 1196 |||||| Sbjct: 1222 gaaccc 1227 Score = 127 bits (64), Expect = 2e-25 Identities = 94/104 (90%) Strand = Plus / Plus Query: 1226 ccgaggtgtttgagcttggcccctctgtatatgttgtagaacttaagaagtcccatggag 1285 ||||||| |||||||||||||| |||||| ||||||||||||||| ||||||| | |||| Sbjct: 1248 ccgaggtttttgagcttggcccttctgtaaatgttgtagaacttaggaagtccaacggag 1307 Query: 1286 accctgaattgtatagacagctctgtgagagaatctccaatgac 1329 |||||| | |||||||||||||||||||||| ||||||| |||| Sbjct: 1308 accctgcactgtatagacagctctgtgagaggatctccagtgac 1351 Score = 125 bits (63), Expect = 6e-25 Identities = 87/95 (91%) Strand = Plus / Plus Query: 793 aatccgacgaagaggatcaacatggcagggatcaaagtacacgaatggtttcaggaggac 852 ||||||| |||||||||| ||||||||||||||||| |||||||||||||||| ||||| Sbjct: 836 aatccgatgaagaggatcgacatggcagggatcaaatcacacgaatggtttcagaaggac 895 Query: 853 tatattcctgttgttccatatgacgatgatgatga 887 |||||||||||| |||||||||| ||||| ||||| Sbjct: 896 tatattcctgttcttccatatgatgatgacgatga 930