BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem202j09 (1730 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|AJ575663.1|TAE575663 Triticum aestivum raftin1a gene, exons 1-3 690 0.0 emb|AJ575662.1|TAE575662 Triticum aestivum mRNA for RAFTIN1a ant... 690 0.0 emb|AJ575665.1|TAE575665 Triticum aestivum raftin1b gene, exons 1-3 634 e-178 ref|NM_001068672.1| Oryza sativa (japonica cultivar-group) Os08g... 529 e-146 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 529 e-146 >emb|AJ575663.1|TAE575663 Triticum aestivum raftin1a gene, exons 1-3 Length = 1560 Score = 690 bits (348), Expect = 0.0 Identities = 595/676 (88%), Gaps = 6/676 (0%) Strand = Plus / Plus Query: 849 acgacgactgtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttctac 908 |||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| | Sbjct: 743 acgacgacggtgttctttcacgaggaggcggtgcgcgtcggcaagaggctcccattccgc 802 Query: 909 ttccctccggcggcgcccgcggcgctcgggttcttgccgcgccgcgtcgcggactccatc 968 ||||| |||||| | ||||| |||||||| ||| ||||||||| ||||| |||||| || Sbjct: 803 ttcccgccggcgactcccgccgcgctcggtttcctgccgcgccaggtcgccgactccgtc 862 Query: 969 ccgttctcgacgccgtcgctgccgggcgtcctcgctctgttcggcatcgcgctggactcc 1028 |||||| ||||| | ||||||| ||||||||||| ||||||| ||||| |||||| Sbjct: 863 ccgttcacgacggccgcgctgcctggcgtcctcgcgacgttcggcgtcgcgtccgactcc 922 Query: 1029 gtcgtggccgccagcatggaggagacgctgcgcacgtgcgagtcgccgaccctcgccggg 1088 | | || ||||||||||||| |||||||||| | ||||||||||||||| |||||||| Sbjct: 923 gccacggtggccagcatggaggcgacgctgcgcgcctgcgagtcgccgaccatcgccggg 982 Query: 1089 gaggccaagttctgcgcgtcgtcgctggaggccctggtggagctcgccatggcgaccctc 1148 ||| |||||||||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 983 gagtccaagttctgcgcgacctcgctggaggccctggtggagcgcgccatggaagtgctg 1042 Query: 1149 gggacccgcgacgtcagcgcggtgacgtcgacgctgccccgcgccggcgcgccgctgcag 1208 |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1043 gggacccgcgacatcaggccggtgacgtcgacgctgccccgcgccggcgccccgctgcag 1102 Query: 1209 ccgtacaccgtccgcgccgttcggccggtcgagggcgcgag---cttcttggcgtgccac 1265 |||||||||||||| |||| |||||||| ||||| | | |||| ||||||||||| Sbjct: 1103 acgtacaccgtccgctccgtgcggccggtggagggggggcctgtcttcgtggcgtgccac 1162 Query: 1266 gacgaggcttacccgtacaccgtgtaccggtgccacaccaccggcccggccagggcgtac 1325 |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 1163 gacgaggcctacccgtacaccgtgtaccggtgccacaccactggcccgtccagggcgtac 1222 Query: 1326 atgatggagatggagggcgcgcacggaggct---cggtgaccgtggccaccgtgtgccac 1382 ||| |||| ||||||||||||| ||| ||| |||||||| | ||||||||||||||| Sbjct: 1223 atggtggacatggagggcgcgcgcggcggcgacgcggtgaccatcgccaccgtgtgccac 1282 Query: 1383 accgacacgtcccggtggaacccggagcacgtctccttcaagctcctcggcaccaagccc 1442 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1283 accgacacgtccctgtggaacccggagcacgtctccttcaagctcctgggcaccaagcct 1342 Query: 1443 ggcggcgcgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1502 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1343 ggcggcacgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1402 Query: 1503 aagcgctcgccggcgt 1518 || ||||||||||||| Sbjct: 1403 aatcgctcgccggcgt 1418 >emb|AJ575662.1|TAE575662 Triticum aestivum mRNA for RAFTIN1a anther protein (raftin1a gene) Length = 1356 Score = 690 bits (348), Expect = 0.0 Identities = 595/676 (88%), Gaps = 6/676 (0%) Strand = Plus / Plus Query: 849 acgacgactgtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttctac 908 |||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| | Sbjct: 521 acgacgacggtgttctttcacgaggaggcggtgcgcgtcggcaagaggctcccattccgc 580 Query: 909 ttccctccggcggcgcccgcggcgctcgggttcttgccgcgccgcgtcgcggactccatc 968 ||||| |||||| | ||||| |||||||| ||| ||||||||| ||||| |||||| || Sbjct: 581 ttcccgccggcgactcccgccgcgctcggtttcctgccgcgccaggtcgccgactccgtc 640 Query: 969 ccgttctcgacgccgtcgctgccgggcgtcctcgctctgttcggcatcgcgctggactcc 1028 |||||| ||||| | ||||||| ||||||||||| ||||||| ||||| |||||| Sbjct: 641 ccgttcacgacggccgcgctgcctggcgtcctcgcgacgttcggcgtcgcgtccgactcc 700 Query: 1029 gtcgtggccgccagcatggaggagacgctgcgcacgtgcgagtcgccgaccctcgccggg 1088 | | || ||||||||||||| |||||||||| | ||||||||||||||| |||||||| Sbjct: 701 gccacggtggccagcatggaggcgacgctgcgcgcctgcgagtcgccgaccatcgccggg 760 Query: 1089 gaggccaagttctgcgcgtcgtcgctggaggccctggtggagctcgccatggcgaccctc 1148 ||| |||||||||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 761 gagtccaagttctgcgcgacctcgctggaggccctggtggagcgcgccatggaagtgctg 820 Query: 1149 gggacccgcgacgtcagcgcggtgacgtcgacgctgccccgcgccggcgcgccgctgcag 1208 |||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 821 gggacccgcgacatcaggccggtgacgtcgacgctgccccgcgccggcgccccgctgcag 880 Query: 1209 ccgtacaccgtccgcgccgttcggccggtcgagggcgcgag---cttcttggcgtgccac 1265 |||||||||||||| |||| |||||||| ||||| | | |||| ||||||||||| Sbjct: 881 acgtacaccgtccgctccgtgcggccggtggagggggggcctgtcttcgtggcgtgccac 940 Query: 1266 gacgaggcttacccgtacaccgtgtaccggtgccacaccaccggcccggccagggcgtac 1325 |||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 941 gacgaggcctacccgtacaccgtgtaccggtgccacaccactggcccgtccagggcgtac 1000 Query: 1326 atgatggagatggagggcgcgcacggaggct---cggtgaccgtggccaccgtgtgccac 1382 ||| |||| ||||||||||||| ||| ||| |||||||| | ||||||||||||||| Sbjct: 1001 atggtggacatggagggcgcgcgcggcggcgacgcggtgaccatcgccaccgtgtgccac 1060 Query: 1383 accgacacgtcccggtggaacccggagcacgtctccttcaagctcctcggcaccaagccc 1442 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1061 accgacacgtccctgtggaacccggagcacgtctccttcaagctcctgggcaccaagcct 1120 Query: 1443 ggcggcgcgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1502 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1121 ggcggcacgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1180 Query: 1503 aagcgctcgccggcgt 1518 || ||||||||||||| Sbjct: 1181 aatcgctcgccggcgt 1196 Score = 113 bits (57), Expect = 2e-21 Identities = 122/143 (85%), Gaps = 3/143 (2%) Strand = Plus / Plus Query: 43 catccatggcgcgcttcctcgtcgctctcctcgctgccaccgtgcttgcggttcaggctg 102 ||||||||||||||||||||||||| |||||||| ||||| || | ||||||||||||| Sbjct: 24 catccatggcgcgcttcctcgtcgccctcctcgccaccaccctggtcgcggttcaggctg 83 Query: 103 ga---cagctgagctatgcagcgccgtcgacggccgaggtgttctggcgcgccatgctgc 159 || |||||| || | || |||||| ||||||| |||||||||||||||||| |||||| Sbjct: 84 gagggcagctgggccacgcggcgccggcgacggcggaggtgttctggcgcgccgtgctgc 143 Query: 160 cggactcccccttgccggacgcc 182 | |||| || ||||| |||||| Sbjct: 144 cacactcgccattgcccgacgcc 166 >emb|AJ575665.1|TAE575665 Triticum aestivum raftin1b gene, exons 1-3 Length = 1503 Score = 634 bits (320), Expect = e-178 Identities = 588/676 (86%), Gaps = 6/676 (0%) Strand = Plus / Plus Query: 849 acgacgactgtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttctac 908 |||||||| |||||||| |||||||||||||||||||||||| ||||||||| ||| || Sbjct: 664 acgacgacggtgttctttcacgaggaggcggtgcgcgtcggcaggaggctcccattccac 723 Query: 909 ttccctccggcggcgcccgcggcgctcgggttcttgccgcgccgcgtcgcggactccatc 968 ||||| |||||| | ||||| || ||||| ||| ||||||||| ||||| |||||| || Sbjct: 724 ttcccgccggcgactcccgccgctctcggtttcctgccgcgccaggtcgccgactccgtc 783 Query: 969 ccgttctcgacgccgtcgctgccgggcgtcctcgctctgttcggcatcgcgctggactcc 1028 |||||| ||||| | ||||||| ||| ||||||| ||| ||||||||| |||||| Sbjct: 784 ccgttcacgacggccgcgctgcccggcatcctcgcgacgtttggcatcgcgtccgactcc 843 Query: 1029 gtcgtggccgccagcatggaggagacgctgcgcacgtgcgagtcgccgaccctcgccggg 1088 | || |||||||||||| |||||||||| | ||||||||||| ||| |||||||| Sbjct: 844 accacggtgcccagcatggaggcgacgctgcgcgcctgcgagtcgcccaccatcgccggg 903 Query: 1089 gaggccaagttctgcgcgtcgtcgctggaggccctggtggagctcgccatggcgaccctc 1148 ||| |||||||||||||| | |||||||||||||||||||||| |||||||| || Sbjct: 904 gagtccaagttctgcgcgacttcgctggaggccctggtggagcgcgccatgggagtgctg 963 Query: 1149 gggacccgcgacgtcagcgcggtgacgtcgacgctgccccgcgccggcgcgccgctgcag 1208 |||||||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 964 gggacccgggacatcaggccggtgacgtcgacgctgccccgcgccggcgccccgctgcag 1023 Query: 1209 ccgtacaccgtccgcgccgttcggccggtcgagggcgcgag---cttcttggcgtgccac 1265 ||||||||||| |||||| | |||||| ||||| | | |||| ||||||||||| Sbjct: 1024 acgtacaccgtcgtcgccgtgcagccggtggagggggggcctgtcttcgtggcgtgccac 1083 Query: 1266 gacgaggcttacccgtacaccgtgtaccggtgccacaccaccggcccggccagggcgtac 1325 |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1084 gacgaggcctacccgtacaccgtgtaccggtgccacaccaccggcccgtccagggcgtac 1143 Query: 1326 atgatggagatggagggcgcgcacggaggct---cggtgaccgtggccaccgtgtgccac 1382 | | |||| ||||||||||||| ||| | | |||||||| | ||| ||||||||||| Sbjct: 1144 acggtggacatggagggcgcgcgcggcgccgacgcggtgaccatcgccgccgtgtgccac 1203 Query: 1383 accgacacgtcccggtggaacccggagcacgtctccttcaagctcctcggcaccaagccc 1442 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 accgacacgtccctgtggaacccggagcacgtctccttcaagctcctcggcaccaagccc 1263 Query: 1443 ggcggcgcgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1502 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 ggcggcacgccggtctgccacctcatgccgtacgggcacataatctgggccaagaacgtg 1323 Query: 1503 aagcgctcgccggcgt 1518 |||||||||||||||| Sbjct: 1324 aagcgctcgccggcgt 1339 >ref|NM_001068672.1| Oryza sativa (japonica cultivar-group) Os08g0496800 (Os08g0496800) mRNA, complete cds Length = 1450 Score = 529 bits (267), Expect = e-146 Identities = 441/499 (88%) Strand = Plus / Plus Query: 846 gccacgacgactgtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttc 905 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 gccacgacgacggtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttc 686 Query: 906 tacttccctccggcggcgcccgcggcgctcgggttcttgccgcgccgcgtcgcggactcc 965 |||||||| ||||| || | ||||||| || ||| ||||||||||||||||||||||| Sbjct: 687 tacttcccggcggcgacgacgtcggcgctgggcttcctgccgcgccgcgtcgcggactcc 746 Query: 966 atcccgttctcgacgccgtcgctgccgggcgtcctcgctctgttcggcatcgcgctggac 1025 ||||||||| || || | ||||||||| ||||||||| ||||||||| |||||| |||| Sbjct: 747 atcccgttcacggcggccgcgctgccggccgtcctcgcgctgttcggcgtcgcgccggac 806 Query: 1026 tccgtcgtggccgccagcatggaggagacgctgcgcacgtgcgagtcgccgaccctcgcc 1085 ||| || ||| ||| ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 807 accgccgaggcggccggcatgagggagacgctgcgcacgtgcgagtggccgaccctcgcc 866 Query: 1086 ggggaggccaagttctgcgcgtcgtcgctggaggccctggtggagctcgccatggcgacc 1145 || ||| ||||||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 867 ggcgagtccaagttctgcgccacgtcgctggaggccctggtggagggcgccatggcggcg 926 Query: 1146 ctcgggacccgcgacgtcagcgcggtgacgtcgacgctgccccgcgccggcgcgccgctg 1205 |||||||| |||||| || |||| || |||||||||||||||||| ||||||||||||| Sbjct: 927 ctcgggacacgcgacatcgccgcgctggcgtcgacgctgccccgcggcggcgcgccgctg 986 Query: 1206 cagccgtacaccgtccgcgccgttcggccggtcgagggcgcgagcttcttggcgtgccac 1265 ||| ||||| ||||||||||||| | || ||||||||||| ||||| ||||||||||| Sbjct: 987 caggcgtacgccgtccgcgccgtgctccccgtcgagggcgccggcttcgtggcgtgccac 1046 Query: 1266 gacgaggcttacccgtacaccgtgtaccggtgccacaccaccggcccggccagggcgtac 1325 ||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 1047 gaccaggcgtacccgtacaccgtgtaccgctgccacaccaccggcccggccagagcttac 1106 Query: 1326 atgatggagatggagggcg 1344 ||| |||||||||| |||| Sbjct: 1107 atggtggagatggaaggcg 1125 Score = 252 bits (127), Expect = 4e-63 Identities = 154/163 (94%) Strand = Plus / Plus Query: 1357 cggtgaccgtggccaccgtgtgccacaccgacacgtcccggtggaacccggagcacgtct 1416 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1150 cggtgaccgtggccaccgtgtgccacaccaacacgtcgcggtggaacccggagcacgtct 1209 Query: 1417 ccttcaagctcctcggcaccaagcccggcggcgcgccggtctgccacctcatgccgtacg 1476 | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 1210 cgttcaagctcctcggcaccaagcccggcggctcgccggtgtgccacctcatgccgtacg 1269 Query: 1477 ggcacataatctgggccaagaacgtgaagcgctcgccggcgta 1519 ||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 1270 ggcacatcgtctgggccaagaacgtgaagagctcgacggcgta 1312 Score = 123 bits (62), Expect = 3e-24 Identities = 83/90 (92%) Strand = Plus / Plus Query: 120 gcgccgtcgacggccgaggtgttctggcgcgccatgctgccggactcccccttgccggac 179 ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| Sbjct: 144 gcgccgtcgacggccgaggtgttctggcgcgccgtgctgccggaatccccgttgccggac 203 Query: 180 gccatcctccgacgactccgccctgacacc 209 ||| ||||||| | ||||||||||||||| Sbjct: 204 gccttcctccgcctcctccgccctgacacc 233 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 529 bits (267), Expect = e-146 Identities = 441/499 (88%) Strand = Plus / Plus Query: 846 gccacgacgactgtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttc 905 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24526823 gccacgacgacggtgttcttccacgaggaggcggtgcgcgtcggcgagaggctcccgttc 24526882 Query: 906 tacttccctccggcggcgcccgcggcgctcgggttcttgccgcgccgcgtcgcggactcc 965 |||||||| ||||| || | ||||||| || ||| ||||||||||||||||||||||| Sbjct: 24526883 tacttcccggcggcgacgacgtcggcgctgggcttcctgccgcgccgcgtcgcggactcc 24526942 Query: 966 atcccgttctcgacgccgtcgctgccgggcgtcctcgctctgttcggcatcgcgctggac 1025 ||||||||| || || | ||||||||| ||||||||| ||||||||| |||||| |||| Sbjct: 24526943 atcccgttcacggcggccgcgctgccggccgtcctcgcgctgttcggcgtcgcgccggac 24527002 Query: 1026 tccgtcgtggccgccagcatggaggagacgctgcgcacgtgcgagtcgccgaccctcgcc 1085 ||| || ||| ||| ||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 24527003 accgccgaggcggccggcatgagggagacgctgcgcacgtgcgagtggccgaccctcgcc 24527062 Query: 1086 ggggaggccaagttctgcgcgtcgtcgctggaggccctggtggagctcgccatggcgacc 1145 || ||| ||||||||||||| ||||||||||||||||||||||| |||||||||| | Sbjct: 24527063 ggcgagtccaagttctgcgccacgtcgctggaggccctggtggagggcgccatggcggcg 24527122 Query: 1146 ctcgggacccgcgacgtcagcgcggtgacgtcgacgctgccccgcgccggcgcgccgctg 1205 |||||||| |||||| || |||| || |||||||||||||||||| ||||||||||||| Sbjct: 24527123 ctcgggacacgcgacatcgccgcgctggcgtcgacgctgccccgcggcggcgcgccgctg 24527182 Query: 1206 cagccgtacaccgtccgcgccgttcggccggtcgagggcgcgagcttcttggcgtgccac 1265 ||| ||||| ||||||||||||| | || ||||||||||| ||||| ||||||||||| Sbjct: 24527183 caggcgtacgccgtccgcgccgtgctccccgtcgagggcgccggcttcgtggcgtgccac 24527242 Query: 1266 gacgaggcttacccgtacaccgtgtaccggtgccacaccaccggcccggccagggcgtac 1325 ||| |||| |||||||||||||||||||| ||||||||||||||||||||||| || ||| Sbjct: 24527243 gaccaggcgtacccgtacaccgtgtaccgctgccacaccaccggcccggccagagcttac 24527302 Query: 1326 atgatggagatggagggcg 1344 ||| |||||||||| |||| Sbjct: 24527303 atggtggagatggaaggcg 24527321 Score = 252 bits (127), Expect = 4e-63 Identities = 154/163 (94%) Strand = Plus / Plus Query: 1357 cggtgaccgtggccaccgtgtgccacaccgacacgtcccggtggaacccggagcacgtct 1416 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 24527346 cggtgaccgtggccaccgtgtgccacaccaacacgtcgcggtggaacccggagcacgtct 24527405 Query: 1417 ccttcaagctcctcggcaccaagcccggcggcgcgccggtctgccacctcatgccgtacg 1476 | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 24527406 cgttcaagctcctcggcaccaagcccggcggctcgccggtgtgccacctcatgccgtacg 24527465 Query: 1477 ggcacataatctgggccaagaacgtgaagcgctcgccggcgta 1519 ||||||| |||||||||||||||||||| ||||| ||||||| Sbjct: 24527466 ggcacatcgtctgggccaagaacgtgaagagctcgacggcgta 24527508 Score = 113 bits (57), Expect = 2e-21 Identities = 78/85 (91%) Strand = Plus / Plus Query: 120 gcgccgtcgacggccgaggtgttctggcgcgccatgctgccggactcccccttgccggac 179 ||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||| Sbjct: 24526258 gcgccgtcgacggccgaggtgttctggcgcgccgtgctgccggaatccccgttgccggac 24526317 Query: 180 gccatcctccgacgactccgccctg 204 ||| ||||||| | |||||||||| Sbjct: 24526318 gccttcctccgcctcctccgccctg 24526342