BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem202e01 (1309 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064073.1| Oryza sativa (japonica cultivar-group) Os06g... 180 9e-42 dbj|AK068748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 2e-39 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-22 dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic D... 117 1e-22 >ref|NM_001064073.1| Oryza sativa (japonica cultivar-group) Os06g0329900 (Os06g0329900) mRNA, complete cds Length = 1439 Score = 180 bits (91), Expect = 9e-42 Identities = 319/395 (80%) Strand = Plus / Plus Query: 550 tcgtctaacagcctgcattggctctcaaaggctcctgaagatctaaagaggaaccaaatc 609 ||||| |||||||| || |||||||| |||||||||||||||| |||| |||| ||| Sbjct: 663 tcgtccaacagcctccactggctctccgaggctcctgaagatctgaagatgaacggaatt 722 Query: 610 ccggcattcgacattgatgggcatgttcggcgagaaagacgacctgtggtccttggggct 669 ||||||| |||| |||| | | | || || |||| |||||| | |||||| |||||||| Sbjct: 723 ccggcatacgacgttgacgcgaacgtgaggagagagagacgagccgtggtcgttggggct 782 Query: 670 tatgcacggcagttcagggaagatttcacactgtttctggagttgagagctaaagaattg 729 |||||||||||||||||| | ||||||| ||||||| || |||| ||| |||| || Sbjct: 783 tatgcacggcagttcaggaaggatttcatggcgtttctgaagatgagggctgtagaactg 842 Query: 730 gttccaggaggccggatggttgtttcccttgcaggcaggcgttctgatgaactcgcctcc 789 || ||||||||||| ||||| | || |||||||||||||| |||| ||| ||||||||| Sbjct: 843 gtcccaggaggccgaatggtactctcacttgcaggcaggcgatctgttgatctcgcctcc 902 Query: 790 aaatttactcacgcctgggaatctgttgccctgattttaagtgacatggcctcaaagggt 849 || | || ||||| |||||||| ||| ||| |||||||||||| | | | |||| Sbjct: 903 gaactcacgcacgcatgggaatccacagccatgaccctaagtgacatggtcactatgggt 962 Query: 850 gtgattgacaaagcaaagtttgcttctttctacataccgatatatggaccttccgacgaa 909 ||||||||||||| |||||||| | |||||||| ||||| || ||||||||||| ||| Sbjct: 963 gtgattgacaaagaaaagtttgaaacattctacatgccgatttacggaccttccgatgaa 1022 Query: 910 gagctgagagagatcatccaggaagagggctcctt 944 ||| | ||| |||||||||| ||||| || ||||| Sbjct: 1023 gagatcagacagatcatccaagaagaagggtcctt 1057 Score = 95.6 bits (48), Expect = 4e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 116 ccatggcctccagccagatggtgcatatgaataaaggactagggggaacaagttatgctc 175 ||||||| |||| |||||||| ||||||||| ||| | ||||| |||||| ||||||| Sbjct: 229 ccatggcatccaaacagatggtacatatgaatcgaggccaaggggaaacaagctatgctc 288 Query: 176 gcaactccagtcttcagaatactgcacagaacaggatgaggtccctgatagaagaggtca 235 | ||||||| ||||||||| ||| |||||||||||||||| | ||||||||||| | || Sbjct: 289 gaaactccattcttcagaacgctgaacagaacaggatgaggccgctgatagaagacgcca 348 Query: 236 tcgc 239 |||| Sbjct: 349 tcgc 352 >dbj|AK068748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159M15, full insert sequence Length = 1441 Score = 172 bits (87), Expect = 2e-39 Identities = 318/395 (80%) Strand = Plus / Plus Query: 550 tcgtctaacagcctgcattggctctcaaaggctcctgaagatctaaagaggaaccaaatc 609 ||||| |||||||| || |||||||| |||||||||||||||| |||| |||| ||| Sbjct: 665 tcgtccaacagcctccactggctctccgaggctcctgaagatctgaagatgaacggaatt 724 Query: 610 ccggcattcgacattgatgggcatgttcggcgagaaagacgacctgtggtccttggggct 669 ||||||| |||| |||| | | | || || |||| ||||| | |||||| |||||||| Sbjct: 725 ccggcatacgacgttgacgcgaacgtgaggagagagcgacgagccgtggtcgttggggct 784 Query: 670 tatgcacggcagttcagggaagatttcacactgtttctggagttgagagctaaagaattg 729 |||||||||||||||||| | ||||||| ||||||| || |||| ||| |||| || Sbjct: 785 tatgcacggcagttcaggaaggatttcatggcgtttctgaagatgagggctgtagaactg 844 Query: 730 gttccaggaggccggatggttgtttcccttgcaggcaggcgttctgatgaactcgcctcc 789 || ||||||||||| ||||| | || |||||||||||||| |||| ||| ||||||||| Sbjct: 845 gtcccaggaggccgaatggtactctcacttgcaggcaggcgatctgttgatctcgcctcc 904 Query: 790 aaatttactcacgcctgggaatctgttgccctgattttaagtgacatggcctcaaagggt 849 || | || ||||| |||||||| ||| ||| |||||||||||| | | | |||| Sbjct: 905 gaactcacgcacgcatgggaatccacagccatgaccctaagtgacatggtcactatgggt 964 Query: 850 gtgattgacaaagcaaagtttgcttctttctacataccgatatatggaccttccgacgaa 909 ||||||||||||| |||||||| | |||||||| ||||| || ||||||||||| ||| Sbjct: 965 gtgattgacaaagaaaagtttgaaacattctacatgccgatttacggaccttccgatgaa 1024 Query: 910 gagctgagagagatcatccaggaagagggctcctt 944 ||| | ||| |||||||||| ||||| || ||||| Sbjct: 1025 gagatcagacagatcatccaagaagaagggtcctt 1059 Score = 95.6 bits (48), Expect = 4e-16 Identities = 105/124 (84%) Strand = Plus / Plus Query: 116 ccatggcctccagccagatggtgcatatgaataaaggactagggggaacaagttatgctc 175 ||||||| |||| |||||||| ||||||||| ||| | ||||| |||||| ||||||| Sbjct: 231 ccatggcatccaaacagatggtacatatgaatcgaggccaaggggaaacaagctatgctc 290 Query: 176 gcaactccagtcttcagaatactgcacagaacaggatgaggtccctgatagaagaggtca 235 | ||||||| ||||||||| ||| |||||||||||||||| | ||||||||||| | || Sbjct: 291 gaaactccattcttcagaacgctgaacagaacaggatgaggccgctgatagaagacgcca 350 Query: 236 tcgc 239 |||| Sbjct: 351 tcgc 354 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 117 bits (59), Expect = 1e-22 Identities = 191/235 (81%) Strand = Plus / Plus Query: 578 aggctcctgaagatctaaagaggaaccaaatcccggcattcgacattgatgggcatgttc 637 |||||||||||||||| |||| |||| ||| ||||||| |||| |||| | | | || Sbjct: 12886099 aggctcctgaagatctgaagatgaacggaattccggcatacgacgttgacgcgaacgtga 12886158 Query: 638 ggcgagaaagacgacctgtggtccttggggcttatgcacggcagttcagggaagatttca 697 || |||| |||||| | |||||| |||||||||||||||||||||||||| | ||||||| Sbjct: 12886159 ggagagagagacgagccgtggtcgttggggcttatgcacggcagttcaggaaggatttca 12886218 Query: 698 cactgtttctggagttgagagctaaagaattggttccaggaggccggatggttgtttccc 757 ||||||| || |||| ||| |||| |||| ||||||||||| ||||| | || | Sbjct: 12886219 tggcgtttctgaagatgagggctgtagaactggtcccaggaggccgaatggtactctcac 12886278 Query: 758 ttgcaggcaggcgttctgatgaactcgcctccaaatttactcacgcctgggaatc 812 ||||||||||||| |||| ||| ||||||||| || | || ||||| |||||||| Sbjct: 12886279 ttgcaggcaggcgatctgttgatctcgcctccgaactcacgcacgcatgggaatc 12886333 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 845 agggtgtgattgacaaagcaaagtttgcttctttctacataccgatatatggaccttccg 904 |||||||||||||||||| |||||||| | |||||||| ||||| || |||||||||| Sbjct: 12886474 agggtgtgattgacaaagaaaagtttgaaacattctacatgccgatttacggaccttccg 12886533 Query: 905 acgaagagctgagagagatcatccaggaagagggctcctt 944 | |||||| | ||| |||||||||| ||||| || ||||| Sbjct: 12886534 atgaagagatcagacagatcatccaagaagaagggtcctt 12886573 >dbj|AP004325.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1230_H04 Length = 123818 Score = 117 bits (59), Expect = 1e-22 Identities = 191/235 (81%) Strand = Plus / Plus Query: 578 aggctcctgaagatctaaagaggaaccaaatcccggcattcgacattgatgggcatgttc 637 |||||||||||||||| |||| |||| ||| ||||||| |||| |||| | | | || Sbjct: 58586 aggctcctgaagatctgaagatgaacggaattccggcatacgacgttgacgcgaacgtga 58645 Query: 638 ggcgagaaagacgacctgtggtccttggggcttatgcacggcagttcagggaagatttca 697 || |||| |||||| | |||||| |||||||||||||||||||||||||| | ||||||| Sbjct: 58646 ggagagagagacgagccgtggtcgttggggcttatgcacggcagttcaggaaggatttca 58705 Query: 698 cactgtttctggagttgagagctaaagaattggttccaggaggccggatggttgtttccc 757 ||||||| || |||| ||| |||| |||| ||||||||||| ||||| | || | Sbjct: 58706 tggcgtttctgaagatgagggctgtagaactggtcccaggaggccgaatggtactctcac 58765 Query: 758 ttgcaggcaggcgttctgatgaactcgcctccaaatttactcacgcctgggaatc 812 ||||||||||||| |||| ||| ||||||||| || | || ||||| |||||||| Sbjct: 58766 ttgcaggcaggcgatctgttgatctcgcctccgaactcacgcacgcatgggaatc 58820 Score = 79.8 bits (40), Expect = 3e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 845 agggtgtgattgacaaagcaaagtttgcttctttctacataccgatatatggaccttccg 904 |||||||||||||||||| |||||||| | |||||||| ||||| || |||||||||| Sbjct: 58961 agggtgtgattgacaaagaaaagtttgaaacattctacatgccgatttacggaccttccg 59020 Query: 905 acgaagagctgagagagatcatccaggaagagggctcctt 944 | |||||| | ||| |||||||||| ||||| || ||||| Sbjct: 59021 atgaagagatcagacagatcatccaagaagaagggtcctt 59060