BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem201m10 (1585 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, comple... 793 0.0 gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 704 0.0 emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary f... 704 0.0 dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 704 0.0 dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 704 0.0 >gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds Length = 1199 Score = 793 bits (400), Expect = 0.0 Identities = 544/592 (91%) Strand = Plus / Plus Query: 584 gccatggctgagcacctcgcgtccatctttggcacggagaaggaccgcgtgaactgcccg 643 |||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 1 gccatggccgagcacctcgcgtcgatcttcggcacggagaaggaccgcgtgaactgcccg 60 Query: 644 ttttacttcaagatcggcgcgtgccggcatggcgaccgctgctcccgcctgcacaaccgc 703 || |||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 ttctacttcaagatcggcgcgtgccggcacggcgaccgctgctcccgcctgcacaacaag 120 Query: 704 ccgtccatctcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgattacc 763 ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 121 ccgtctgtctcgcccacgctgctgctctgcaacatgtaccagcgccccgacatgatcacc 180 Query: 764 ccgggcgtcgacgcgcagggcaaccccattgaccccggcaagatccagggcgacttcgag 823 |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 181 ccgggcgtggacgcgcagggcaaccccatcgaccccgtcaagatccagggcgacttcgag 240 Query: 824 gacttctacgaggacatcttcgacgagctcagcaagtacggggagatcgagagcctgaac 883 |||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||| || Sbjct: 241 gacttctacgaggacatcttcgacgagctcagcaagcacggcgaggtcgagaacctgcac 300 Query: 884 gtgtgcgacaacctcgccgaccacattatcggcaacgtgtacgtgcagttcagggaggag 943 || ||||||||||||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 301 gtctgcgacaacctcgccgaccacctcattggcaacgtctacgtgcagttcagggaggag 360 Query: 944 gatcaggccgccagggcgctgcaggcgctgcaggggaggttctactccggccgccccatc 1003 || |||||||||| ||| || |||||||||||||||||||||||||| |||||||||||| Sbjct: 361 gaccaggccgccaaggccctccaggcgctgcaggggaggttctactcgggccgccccatc 420 Query: 1004 atcgccgagttctcgccggtcaccgacttccgggaggccacctgccggcagtttgaggag 1063 || || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 421 attgctgagttctcgcccgtcaccgacttcagggaggccacctgccggcagtttgaggag 480 Query: 1064 aacagttgcaaccgtggagggtactgcaatttcatgcatgtgaaggagatagggagagac 1123 ||| |||||||| |||||||||||||| ||||||||||| ||||||||||| || ||| Sbjct: 481 cacaactgcaaccgcggagggtactgcaacttcatgcatgtcaaggagataggcagggac 540 Query: 1124 ctgaggatgaggctgtttggccacctgcataggtcccggagaagccacagca 1175 ||||||| |||||||| ||| ||||||||||||||| |||| |||||||||| Sbjct: 541 ctgaggaagaggctgtatgggcacctgcataggtccgggaggagccacagca 592 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 1349 aggactagaagcccggttagggagggcagcgaggagaggagggctcggattgagcagtgg 1408 |||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||| Sbjct: 793 aggactaggagccccgtcagggagggcagcgaggagaggagggcgaagattgagcagtgg 852 Query: 1409 aaccgtgaaagggaggc 1425 ||||||||||||||||| Sbjct: 853 aaccgtgaaagggaggc 869 >gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 704 bits (355), Expect = 0.0 Identities = 591/670 (88%), Gaps = 6/670 (0%) Strand = Plus / Minus Query: 585 ccatggctgagcacctcgcgtccatctttggcacggagaaggaccgcgtgaactgcccgt 644 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 54364 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 54305 Query: 645 tttacttcaagatcggcgcgtgccggcatggcgaccgctgctcccgcctgcacaaccgcc 704 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 54304 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 54245 Query: 705 cgtccatctcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgattaccc 764 |||| ||||||||||||||||||| | ||||||||||| ||| || |||||||| |||| Sbjct: 54244 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 54185 Query: 765 cgggcgtcgacgcgcagggcaaccccattgaccccggcaagatccagggcgacttcgagg 824 | || | || || |||||||||||||| ||||| | |||||||||| ||||||||||| Sbjct: 54184 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 54125 Query: 825 acttctacgaggacatcttcgacgagctcagcaagtacggggagatcgagagcctgaacg 884 | ||||||||||||||||| || || |||||||||||||| |||||||||||||| ||| Sbjct: 54124 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 54065 Query: 885 tgtgcgacaacctcgccgaccacattatcggcaacgtgtacgtgcagttcagggaggagg 944 |||| |||||| ||||||||||||| |||||||| ||||| || || ||||||||||||| Sbjct: 54064 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 54005 Query: 945 atcaggccgccagggcgctgcaggcgctgcaggggaggttctactccggccgccccatca 1004 ||||||||||||| ||||||||||||||| |||| ||| |||||||||||| || |||| Sbjct: 54004 atcaggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatca 53945 Query: 1005 tcgccgagttctcgccggtcaccgacttccgggaggccacctgccggcagtttgaggaga 1064 | | ||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||| Sbjct: 53944 ttgtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagaga 53885 Query: 1065 acagttgcaaccgtggagggtactgcaatttcatgcatgtgaaggagatagggagagacc 1124 |||| ||||||||||| ||||||||||| |||||||| || |||||||| || ||||||| Sbjct: 53884 acagctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacc 53825 Query: 1125 tgaggatgaggctgtttggccacctgcataggtcccggagaagccacagcaatggccaca 1184 |||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 53824 tgaggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggcc--- 53768 Query: 1185 gcaggagccggagcccgagcccgtaccattaccggagggaccatgatcgtaggagctcgt 1244 ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 53767 ---ggagccgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcat 53711 Query: 1245 cgcggtccag 1254 |||||||||| Sbjct: 53710 cgcggtccag 53701 Score = 99.6 bits (50), Expect = 3e-17 Identities = 80/90 (88%) Strand = Plus / Minus Query: 1349 aggactagaagcccggttagggagggcagcgaggagaggagggctcggattgagcagtgg 1408 |||||||| || || || ||||| || |||||||||||||| |||| |||||||||||| Sbjct: 53579 aggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcagtgg 53520 Query: 1409 aaccgtgaaagggaggctgcgcaagtgtga 1438 |||||||||||||||||||| ||||||||| Sbjct: 53519 aaccgtgaaagggaggctgcacaagtgtga 53490 >emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a Length = 1277 Score = 704 bits (355), Expect = 0.0 Identities = 591/670 (88%), Gaps = 6/670 (0%) Strand = Plus / Plus Query: 585 ccatggctgagcacctcgcgtccatctttggcacggagaaggaccgcgtgaactgcccgt 644 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 210 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 269 Query: 645 tttacttcaagatcggcgcgtgccggcatggcgaccgctgctcccgcctgcacaaccgcc 704 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 270 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 329 Query: 705 cgtccatctcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgattaccc 764 |||| ||||||||||||||||||| | ||||||||||| ||| || |||||||| |||| Sbjct: 330 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 389 Query: 765 cgggcgtcgacgcgcagggcaaccccattgaccccggcaagatccagggcgacttcgagg 824 | || | || || |||||||||||||| ||||| | |||||||||| ||||||||||| Sbjct: 390 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 449 Query: 825 acttctacgaggacatcttcgacgagctcagcaagtacggggagatcgagagcctgaacg 884 | ||||||||||||||||| || || |||||||||||||| |||||||||||||| ||| Sbjct: 450 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 509 Query: 885 tgtgcgacaacctcgccgaccacattatcggcaacgtgtacgtgcagttcagggaggagg 944 |||| |||||| ||||||||||||| |||||||| ||||| || || ||||||||||||| Sbjct: 510 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 569 Query: 945 atcaggccgccagggcgctgcaggcgctgcaggggaggttctactccggccgccccatca 1004 ||||||||||||| ||||||||||||||| |||| ||| |||||||||||| || |||| Sbjct: 570 atcaggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatca 629 Query: 1005 tcgccgagttctcgccggtcaccgacttccgggaggccacctgccggcagtttgaggaga 1064 | | ||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||| Sbjct: 630 ttgtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagaga 689 Query: 1065 acagttgcaaccgtggagggtactgcaatttcatgcatgtgaaggagatagggagagacc 1124 |||| ||||||||||| ||||||||||| |||||||| || |||||||| || ||||||| Sbjct: 690 acagctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacc 749 Query: 1125 tgaggatgaggctgtttggccacctgcataggtcccggagaagccacagcaatggccaca 1184 |||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 750 tgaggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggcc--- 806 Query: 1185 gcaggagccggagcccgagcccgtaccattaccggagggaccatgatcgtaggagctcgt 1244 ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 807 ---ggagccgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcat 863 Query: 1245 cgcggtccag 1254 |||||||||| Sbjct: 864 cgcggtccag 873 Score = 99.6 bits (50), Expect = 3e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1349 aggactagaagcccggttagggagggcagcgaggagaggagggctcggattgagcagtgg 1408 |||||||| || || || ||||| || |||||||||||||| |||| |||||||||||| Sbjct: 995 aggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcagtgg 1054 Query: 1409 aaccgtgaaagggaggctgcgcaagtgtga 1438 |||||||||||||||||||| ||||||||| Sbjct: 1055 aaccgtgaaagggaggctgcacaagtgtga 1084 >dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full insert sequence Length = 1499 Score = 704 bits (355), Expect = 0.0 Identities = 591/670 (88%), Gaps = 6/670 (0%) Strand = Plus / Plus Query: 585 ccatggctgagcacctcgcgtccatctttggcacggagaaggaccgcgtgaactgcccgt 644 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 431 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 490 Query: 645 tttacttcaagatcggcgcgtgccggcatggcgaccgctgctcccgcctgcacaaccgcc 704 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 491 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 550 Query: 705 cgtccatctcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgattaccc 764 |||| ||||||||||||||||||| | ||||||||||| ||| || |||||||| |||| Sbjct: 551 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 610 Query: 765 cgggcgtcgacgcgcagggcaaccccattgaccccggcaagatccagggcgacttcgagg 824 | || | || || |||||||||||||| ||||| | |||||||||| ||||||||||| Sbjct: 611 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 670 Query: 825 acttctacgaggacatcttcgacgagctcagcaagtacggggagatcgagagcctgaacg 884 | ||||||||||||||||| || || |||||||||||||| |||||||||||||| ||| Sbjct: 671 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 730 Query: 885 tgtgcgacaacctcgccgaccacattatcggcaacgtgtacgtgcagttcagggaggagg 944 |||| |||||| ||||||||||||| |||||||| ||||| || || ||||||||||||| Sbjct: 731 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 790 Query: 945 atcaggccgccagggcgctgcaggcgctgcaggggaggttctactccggccgccccatca 1004 ||||||||||||| ||||||||||||||| |||| ||| |||||||||||| || |||| Sbjct: 791 atcaggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatca 850 Query: 1005 tcgccgagttctcgccggtcaccgacttccgggaggccacctgccggcagtttgaggaga 1064 | | ||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||| Sbjct: 851 ttgtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagaga 910 Query: 1065 acagttgcaaccgtggagggtactgcaatttcatgcatgtgaaggagatagggagagacc 1124 |||| ||||||||||| ||||||||||| |||||||| || |||||||| || ||||||| Sbjct: 911 acagctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacc 970 Query: 1125 tgaggatgaggctgtttggccacctgcataggtcccggagaagccacagcaatggccaca 1184 |||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 971 tgaggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggcc--- 1027 Query: 1185 gcaggagccggagcccgagcccgtaccattaccggagggaccatgatcgtaggagctcgt 1244 ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 1028 ---ggagccgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcat 1084 Query: 1245 cgcggtccag 1254 |||||||||| Sbjct: 1085 cgcggtccag 1094 Score = 99.6 bits (50), Expect = 3e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1349 aggactagaagcccggttagggagggcagcgaggagaggagggctcggattgagcagtgg 1408 |||||||| || || || ||||| || |||||||||||||| |||| |||||||||||| Sbjct: 1216 aggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcagtgg 1275 Query: 1409 aaccgtgaaagggaggctgcgcaagtgtga 1438 |||||||||||||||||||| ||||||||| Sbjct: 1276 aaccgtgaaagggaggctgcacaagtgtga 1305 >dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full insert sequence Length = 1257 Score = 704 bits (355), Expect = 0.0 Identities = 591/670 (88%), Gaps = 6/670 (0%) Strand = Plus / Plus Query: 585 ccatggctgagcacctcgcgtccatctttggcacggagaaggaccgcgtgaactgcccgt 644 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 221 ccatggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgcccct 280 Query: 645 tttacttcaagatcggcgcgtgccggcatggcgaccgctgctcccgcctgcacaaccgcc 704 | ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| | Sbjct: 281 tctacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagc 340 Query: 705 cgtccatctcgccgacgctgctgctgtgcaacatgtaccagcgccccgacatgattaccc 764 |||| ||||||||||||||||||| | ||||||||||| ||| || |||||||| |||| Sbjct: 341 cgtcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcaccc 400 Query: 765 cgggcgtcgacgcgcagggcaaccccattgaccccggcaagatccagggcgacttcgagg 824 | || | || || |||||||||||||| ||||| | |||||||||| ||||||||||| Sbjct: 401 ctggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgagg 460 Query: 825 acttctacgaggacatcttcgacgagctcagcaagtacggggagatcgagagcctgaacg 884 | ||||||||||||||||| || || |||||||||||||| |||||||||||||| ||| Sbjct: 461 atttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacg 520 Query: 885 tgtgcgacaacctcgccgaccacattatcggcaacgtgtacgtgcagttcagggaggagg 944 |||| |||||| ||||||||||||| |||||||| ||||| || || ||||||||||||| Sbjct: 521 tgtgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggagg 580 Query: 945 atcaggccgccagggcgctgcaggcgctgcaggggaggttctactccggccgccccatca 1004 ||||||||||||| ||||||||||||||| |||| ||| |||||||||||| || |||| Sbjct: 581 atcaggccgccagagcgctgcaggcgctgacggggcggtactactccggccgtcctatca 640 Query: 1005 tcgccgagttctcgccggtcaccgacttccgggaggccacctgccggcagtttgaggaga 1064 | | ||||||||||||||| |||| ||||||||||||||||||||||| | ||| |||| Sbjct: 641 ttgtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagaga 700 Query: 1065 acagttgcaaccgtggagggtactgcaatttcatgcatgtgaaggagatagggagagacc 1124 |||| ||||||||||| ||||||||||| |||||||| || |||||||| || ||||||| Sbjct: 701 acagctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacc 760 Query: 1125 tgaggatgaggctgtttggccacctgcataggtcccggagaagccacagcaatggccaca 1184 |||||| |||| ||||||| |||||||||||||||||||||||||| ||| |||||| Sbjct: 761 tgaggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggcc--- 817 Query: 1185 gcaggagccggagcccgagcccgtaccattaccggagggaccatgatcgtaggagctcgt 1244 ||||||| |||||||||||||||||||||||||||||| ||||||| |||||||| | Sbjct: 818 ---ggagccgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcat 874 Query: 1245 cgcggtccag 1254 |||||||||| Sbjct: 875 cgcggtccag 884 Score = 99.6 bits (50), Expect = 3e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 1349 aggactagaagcccggttagggagggcagcgaggagaggagggctcggattgagcagtgg 1408 |||||||| || || || ||||| || |||||||||||||| |||| |||||||||||| Sbjct: 1006 aggactaggagtcctgtcagggatggtagcgaggagaggagagctcaaattgagcagtgg 1065 Query: 1409 aaccgtgaaagggaggctgcgcaagtgtga 1438 |||||||||||||||||||| ||||||||| Sbjct: 1066 aaccgtgaaagggaggctgcacaagtgtga 1095