BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem201h23 (1564 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056822.1| Oryza sativa (japonica cultivar-group) Os03g... 123 2e-24 dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 2e-24 ref|NM_001073512.1| Oryza sativa (japonica cultivar-group) Os12g... 105 5e-19 dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 5e-19 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 1e-16 >ref|NM_001056822.1| Oryza sativa (japonica cultivar-group) Os03g0393900 (Os03g0393900) mRNA, complete cds Length = 1525 Score = 123 bits (62), Expect = 2e-24 Identities = 149/178 (83%) Strand = Plus / Plus Query: 165 gggtgacggtgctgaccatcgacggaggcggcattcgaggcctcatccccggcaccatcc 224 |||||||| ||||| | |||||||| |||||||| | ||||||||||| |||||||||| Sbjct: 179 gggtgacgttgctggcgatcgacggcggcggcatcaggggcctcatcccgggcaccatcc 238 Query: 225 tcgccttccttgaatcaaagctccaagaacttgacgggccggacgcacggctggccgact 284 |||||||||| || | | ||| || || || || || || ||||| || || ||||| | Sbjct: 239 tcgccttcctcgaggccaggctgcaggagctggatggccccgacgcgcgcctcgccgatt 298 Query: 285 acttcgactacatcgccggaaccagcaccggcggccttatcacggcgatgctcgccgc 342 ||||||||| ||||||||| ||||||||||||||||| ||||| || ||||||||||| Sbjct: 299 acttcgactgcatcgccgggaccagcaccggcggcctcatcaccgccatgctcgccgc 356 Score = 109 bits (55), Expect = 3e-20 Identities = 174/213 (81%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 539 aacgtcgtcatccccaccttcgacgtcaagaacctgcagcccaccatcttctccaccttc 598 ||||||||||||||||| |||||||||| | || ||||| |||||||||||||| | | Sbjct: 562 aacgtcgtcatccccacgttcgacgtcaggctgctccagccaaccatcttctccacatac 621 Query: 599 gatgctaagaacctgcctctgaaagacgcgctgctatcggacgtgtgcatcggcacatcg 658 || || |||| | |||| || || ||||||| || || ||| | |||||| ||||||| Sbjct: 622 gacgcgaagagcatgccgctcaagaacgcgctcctctccgacatctgcatcagcacatcc 681 Query: 659 gcggcgccgacctatctccccgcccacttcttccagacaa---aggactccagcggcaat 715 |||||||||||||| |||||||| |||| ||||||||| | | ||| ||| |||||| Sbjct: 682 gcggcgccgacctacctccccgcgcactgcttccagaccaccgacgacgccaccggcaag 741 Query: 716 acccgcgacttcaacctcatcgacggcggcgtc 748 |||||| ||| |||||||||||||||||||| Sbjct: 742 gtccgcgagttcgacctcatcgacggcggcgtc 774 >dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J03, full insert sequence Length = 1526 Score = 123 bits (62), Expect = 2e-24 Identities = 149/178 (83%) Strand = Plus / Plus Query: 165 gggtgacggtgctgaccatcgacggaggcggcattcgaggcctcatccccggcaccatcc 224 |||||||| ||||| | |||||||| |||||||| | ||||||||||| |||||||||| Sbjct: 180 gggtgacgttgctggcgatcgacggcggcggcatcaggggcctcatcccgggcaccatcc 239 Query: 225 tcgccttccttgaatcaaagctccaagaacttgacgggccggacgcacggctggccgact 284 |||||||||| || | | ||| || || || || || || ||||| || || ||||| | Sbjct: 240 tcgccttcctcgaggccaggctgcaggagctggatggccccgacgcgcgcctcgccgatt 299 Query: 285 acttcgactacatcgccggaaccagcaccggcggccttatcacggcgatgctcgccgc 342 ||||||||| ||||||||| ||||||||||||||||| ||||| || ||||||||||| Sbjct: 300 acttcgactgcatcgccgggaccagcaccggcggcctcatcaccgccatgctcgccgc 357 Score = 109 bits (55), Expect = 3e-20 Identities = 174/213 (81%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 539 aacgtcgtcatccccaccttcgacgtcaagaacctgcagcccaccatcttctccaccttc 598 ||||||||||||||||| |||||||||| | || ||||| |||||||||||||| | | Sbjct: 563 aacgtcgtcatccccacgttcgacgtcaggctgctccagccaaccatcttctccacatac 622 Query: 599 gatgctaagaacctgcctctgaaagacgcgctgctatcggacgtgtgcatcggcacatcg 658 || || |||| | |||| || || ||||||| || || ||| | |||||| ||||||| Sbjct: 623 gacgcgaagagcatgccgctcaagaacgcgctcctctccgacatctgcatcagcacatcc 682 Query: 659 gcggcgccgacctatctccccgcccacttcttccagacaa---aggactccagcggcaat 715 |||||||||||||| |||||||| |||| ||||||||| | | ||| ||| |||||| Sbjct: 683 gcggcgccgacctacctccccgcgcactgcttccagaccaccgacgacgccaccggcaag 742 Query: 716 acccgcgacttcaacctcatcgacggcggcgtc 748 |||||| ||| |||||||||||||||||||| Sbjct: 743 gtccgcgagttcgacctcatcgacggcggcgtc 775 >ref|NM_001073512.1| Oryza sativa (japonica cultivar-group) Os12g0552200 (Os12g0552200) mRNA, partial cds Length = 1522 Score = 105 bits (53), Expect = 5e-19 Identities = 175/215 (81%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 533 ctcaccaacgtcgtcatccccaccttcgacgtcaagaacctgcagcccaccatcttctcc 592 |||||||| |||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 530 ctcaccaatgtcgtcgtccccaccttcgacgtccgcctgctccagcccgtcatcttctcc 589 Query: 593 accttcgatgctaagaacctgcctctgaaagacgcgctgctatcggacgtgtgcatcggc 652 || | ||| || |||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 590 acatacgaggcgaagaactcgcctctgaagaacgcgctgctctccgacgtatgcatcggc 649 Query: 653 acatcggcggcgccgacctatctccccgcccacttcttccagacaaagga---ctccagc 709 || ||| |||||||||| || |||||||| |||| ||||| |||| | || | ||||| Sbjct: 650 acgtcgtcggcgccgacgtacctccccgcgcactgcttccggacacacgacggcgccagc 709 Query: 710 ggcaatacccgcgacttcaacctcatcgacggcgg 744 ||| | || ||||| | |||||||||||||||||| Sbjct: 710 ggcgaaacgcgcgagtacaacctcatcgacggcgg 744 >dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D02, full insert sequence Length = 1522 Score = 105 bits (53), Expect = 5e-19 Identities = 175/215 (81%), Gaps = 3/215 (1%) Strand = Plus / Plus Query: 533 ctcaccaacgtcgtcatccccaccttcgacgtcaagaacctgcagcccaccatcttctcc 592 |||||||| |||||| ||||||||||||||||| || |||||| |||||||||| Sbjct: 530 ctcaccaatgtcgtcgtccccaccttcgacgtccgcctgctccagcccgtcatcttctcc 589 Query: 593 accttcgatgctaagaacctgcctctgaaagacgcgctgctatcggacgtgtgcatcggc 652 || | ||| || |||||| ||||||||| |||||||||| || ||||| ||||||||| Sbjct: 590 acatacgaggcgaagaactcgcctctgaagaacgcgctgctctccgacgtatgcatcggc 649 Query: 653 acatcggcggcgccgacctatctccccgcccacttcttccagacaaagga---ctccagc 709 || ||| |||||||||| || |||||||| |||| ||||| |||| | || | ||||| Sbjct: 650 acgtcgtcggcgccgacgtacctccccgcgcactgcttccggacacacgacggcgccagc 709 Query: 710 ggcaatacccgcgacttcaacctcatcgacggcgg 744 ||| | || ||||| | |||||||||||||||||| Sbjct: 710 ggcgaaacgcgcgagtacaacctcatcgacggcgg 744 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 97.6 bits (49), Expect = 1e-16 Identities = 67/73 (91%) Strand = Plus / Minus Query: 273 ggctggccgactacttcgactacatcgccggaaccagcaccggcggccttatcacggcga 332 ||||||||||||||||||||||||||||||| || ||||||||||| || ||||| |||| Sbjct: 22360999 ggctggccgactacttcgactacatcgccggcacgagcaccggcgggctgatcaccgcga 22360940 Query: 333 tgctcgccgcccc 345 |||||||| |||| Sbjct: 22360939 tgctcgccacccc 22360927 Score = 93.7 bits (47), Expect = 2e-15 Identities = 116/139 (83%) Strand = Plus / Plus Query: 624 acgcgctgctatcggacgtgtgcatcggcacatcggcggcgccgacctatctccccgccc 683 |||||||||| || ||||| ||||||||||| |||||||||||||| || |||||||| | Sbjct: 22406408 acgcgctgctctccgacgtctgcatcggcacgtcggcggcgccgacgtacctccccgcgc 22406467 Query: 684 acttcttccagacaaaggactccagcggcaatacccgcgacttcaacctcatcgacggcg 743 ||| ||||| |||| | ||| | |||| | || ||||| | ||||||||||||||||| Sbjct: 22406468 actgcttccggacacacgacggcgccggcgaaacgcgcgagtacaacctcatcgacggcg 22406527 Query: 744 gcgtctcggcaaacaatcc 762 ||||| | || |||||||| Sbjct: 22406528 gcgtcgctgccaacaatcc 22406546 Score = 91.7 bits (46), Expect = 8e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 273 ggctggccgactacttcgactacatcgccggaaccagcaccggcggccttatcacggcga 332 ||||||||||||||||||||||||||||||| || ||||||||||| || ||||| |||| Sbjct: 22405939 ggctggccgactacttcgactacatcgccgggacgagcaccggcgggctgatcaccgcga 22405998 Query: 333 tgctcgccgc 342 |||| ||||| Sbjct: 22405999 tgctggccgc 22406008