BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem127i14 (968 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT829485.1| Oryza sativa (indica cultivar-group) cDNA clone:... 196 1e-46 ref|NM_001048917.1| Oryza sativa (japonica cultivar-group) Os01g... 196 1e-46 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 196 1e-46 dbj|AK068075.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 1e-46 >emb|CT829485.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA127K19, full insert sequence Length = 1074 Score = 196 bits (99), Expect = 1e-46 Identities = 132/143 (92%) Strand = Plus / Plus Query: 488 gactgcgccgtgtgcctgtcggagctcgaggacggcgagaaggtgcgggagctgcccaac 547 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 502 gactgcgccgtgtgtctgtcggagctcgccgacggcgagaaggtgcgggagctgcccaac 561 Query: 548 tgtggtcacgtgttccacgtggagtgcgtcgacgcgtggctgcgctcgaggacgacgtgc 607 || | ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 562 tgccggcacgtcttccacgtggagtgcgtcgacgcgtggctgcgctccaggaccacgtgc 621 Query: 608 cctctctgccgggcggaggcgga 630 || ||||||||||| |||||||| Sbjct: 622 ccgctctgccgggccgaggcgga 644 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 208 gcagcagaactacaacttcagcggccgcgtcctgctcacggccgtcgtcatcctcctcgt 267 |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 183 gcagcagagctacaacttcagcgggcgcgtgctgctcacggccgtcgtgatcctgttcgt 242 Query: 268 gctcaccgttgtattcgtcctcatccggatcctgctgtaccagctcgtggtgcggcc 324 | || |||| || |||| | ||| ||| || |||||||| | |||||||||||||| Sbjct: 243 gatcgccgtcgtcttcgccgtcacccgcgtcttgctgtactacctcgtggtgcggcc 299 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 403 cgggctggacgcgtccgcgctctccgcgctgccggtcacgtcgtaccggaag 454 |||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 387 cgggctggacgcgtccgcgctcgccgcgctgccggtcaccgcgtaccggaag 438 >ref|NM_001048917.1| Oryza sativa (japonica cultivar-group) Os01g0213400 (Os01g0213400) mRNA, complete cds Length = 958 Score = 196 bits (99), Expect = 1e-46 Identities = 132/143 (92%) Strand = Plus / Plus Query: 488 gactgcgccgtgtgcctgtcggagctcgaggacggcgagaaggtgcgggagctgcccaac 547 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 470 gactgcgccgtgtgtctgtcggagctcgccgacggcgagaaggtgcgggagctgcccaac 529 Query: 548 tgtggtcacgtgttccacgtggagtgcgtcgacgcgtggctgcgctcgaggacgacgtgc 607 || | ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 530 tgccggcacgtcttccacgtggagtgcgtcgacgcgtggctgcgctccaggaccacgtgc 589 Query: 608 cctctctgccgggcggaggcgga 630 || ||||||||||| |||||||| Sbjct: 590 ccgctctgccgggccgaggcgga 612 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 208 gcagcagaactacaacttcagcggccgcgtcctgctcacggccgtcgtcatcctcctcgt 267 |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 151 gcagcagagctacaacttcagcgggcgcgtgctgctcacggccgtcgtgatcctgttcgt 210 Query: 268 gctcaccgttgtattcgtcctcatccggatcctgctgtaccagctcgtggtgcggcc 324 | || |||| || |||| | ||| ||| || |||||||| | |||||||||||||| Sbjct: 211 gatcgccgtcgtcttcgccgtcacccgcgtcttgctgtactacctcgtggtgcggcc 267 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 403 cgggctggacgcgtccgcgctctccgcgctgccggtcacgtcgtaccggaag 454 |||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 355 cgggctggacgcgtccgcgctcgccgcgctgccggtcaccgcgtaccggaag 406 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 196 bits (99), Expect = 1e-46 Identities = 132/143 (92%) Strand = Plus / Minus Query: 488 gactgcgccgtgtgcctgtcggagctcgaggacggcgagaaggtgcgggagctgcccaac 547 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6198733 gactgcgccgtgtgtctgtcggagctcgccgacggcgagaaggtgcgggagctgcccaac 6198674 Query: 548 tgtggtcacgtgttccacgtggagtgcgtcgacgcgtggctgcgctcgaggacgacgtgc 607 || | ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 6198673 tgccggcacgtcttccacgtggagtgcgtcgacgcgtggctgcgctccaggaccacgtgc 6198614 Query: 608 cctctctgccgggcggaggcgga 630 || ||||||||||| |||||||| Sbjct: 6198613 ccgctctgccgggccgaggcgga 6198591 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 208 gcagcagaactacaacttcagcggccgcgtcctgctcacggccgtcgtcatcctcctcgt 267 |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 6199052 gcagcagagctacaacttcagcgggcgcgtgctgctcacggccgtcgtgatcctgttcgt 6198993 Query: 268 gctcaccgttgtattcgtcctcatccggatcctgctgtaccagctcgtggtgcggcc 324 | || |||| || |||| | ||| ||| || |||||||| | |||||||||||||| Sbjct: 6198992 gatcgccgtcgtcttcgccgtcacccgcgtcttgctgtactacctcgtggtgcggcc 6198936 Score = 81.8 bits (41), Expect = 5e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 520 cggcgagaaggtgcgggagctgcccaactgtggtcacgtgttccacgtggagtgcgtcga 579 |||||||||||||||| |||||||||| || || ||| ||||||||| ||||||||||| Sbjct: 6171634 cggcgagaaggtgcggcagctgcccaagtgcgggcacctgttccacgccgagtgcgtcga 6171575 Query: 580 cgcgtggctgcgc 592 ||| ||||||||| Sbjct: 6171574 cgcctggctgcgc 6171562 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 403 cgggctggacgcgtccgcgctctccgcgctgccggtcacgtcgtaccggaag 454 |||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 6198848 cgggctggacgcgtccgcgctcgccgcgctgccggtcaccgcgtaccggaag 6198797 >dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0038J17 Length = 180186 Score = 196 bits (99), Expect = 1e-46 Identities = 132/143 (92%) Strand = Plus / Minus Query: 488 gactgcgccgtgtgcctgtcggagctcgaggacggcgagaaggtgcgggagctgcccaac 547 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 60931 gactgcgccgtgtgtctgtcggagctcgccgacggcgagaaggtgcgggagctgcccaac 60872 Query: 548 tgtggtcacgtgttccacgtggagtgcgtcgacgcgtggctgcgctcgaggacgacgtgc 607 || | ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 60871 tgccggcacgtcttccacgtggagtgcgtcgacgcgtggctgcgctccaggaccacgtgc 60812 Query: 608 cctctctgccgggcggaggcgga 630 || ||||||||||| |||||||| Sbjct: 60811 ccgctctgccgggccgaggcgga 60789 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Minus Query: 208 gcagcagaactacaacttcagcggccgcgtcctgctcacggccgtcgtcatcctcctcgt 267 |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 61250 gcagcagagctacaacttcagcgggcgcgtgctgctcacggccgtcgtgatcctgttcgt 61191 Query: 268 gctcaccgttgtattcgtcctcatccggatcctgctgtaccagctcgtggtgcggcc 324 | || |||| || |||| | ||| ||| || |||||||| | |||||||||||||| Sbjct: 61190 gatcgccgtcgtcttcgccgtcacccgcgtcttgctgtactacctcgtggtgcggcc 61134 Score = 81.8 bits (41), Expect = 5e-12 Identities = 65/73 (89%) Strand = Plus / Minus Query: 520 cggcgagaaggtgcgggagctgcccaactgtggtcacgtgttccacgtggagtgcgtcga 579 |||||||||||||||| |||||||||| || || ||| ||||||||| ||||||||||| Sbjct: 33832 cggcgagaaggtgcggcagctgcccaagtgcgggcacctgttccacgccgagtgcgtcga 33773 Query: 580 cgcgtggctgcgc 592 ||| ||||||||| Sbjct: 33772 cgcctggctgcgc 33760 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 403 cgggctggacgcgtccgcgctctccgcgctgccggtcacgtcgtaccggaag 454 |||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 61046 cgggctggacgcgtccgcgctcgccgcgctgccggtcaccgcgtaccggaag 60995 >dbj|AK068075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134A03, full insert sequence Length = 959 Score = 196 bits (99), Expect = 1e-46 Identities = 132/143 (92%) Strand = Plus / Plus Query: 488 gactgcgccgtgtgcctgtcggagctcgaggacggcgagaaggtgcgggagctgcccaac 547 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 471 gactgcgccgtgtgtctgtcggagctcgccgacggcgagaaggtgcgggagctgcccaac 530 Query: 548 tgtggtcacgtgttccacgtggagtgcgtcgacgcgtggctgcgctcgaggacgacgtgc 607 || | ||||| ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 531 tgccggcacgtcttccacgtggagtgcgtcgacgcgtggctgcgctccaggaccacgtgc 590 Query: 608 cctctctgccgggcggaggcgga 630 || ||||||||||| |||||||| Sbjct: 591 ccgctctgccgggccgaggcgga 613 Score = 89.7 bits (45), Expect = 2e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 208 gcagcagaactacaacttcagcggccgcgtcctgctcacggccgtcgtcatcctcctcgt 267 |||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| Sbjct: 152 gcagcagagctacaacttcagcgggcgcgtgctgctcacggccgtcgtgatcctgttcgt 211 Query: 268 gctcaccgttgtattcgtcctcatccggatcctgctgtaccagctcgtggtgcggcc 324 | || |||| || |||| | ||| ||| || |||||||| | |||||||||||||| Sbjct: 212 gatcgccgtcgtcttcgccgtcacccgcgtcttgctgtactacctcgtggtgcggcc 268 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 403 cgggctggacgcgtccgcgctctccgcgctgccggtcacgtcgtaccggaag 454 |||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 356 cgggctggacgcgtccgcgctcgccgcgctgccggtcaccgcgtaccggaag 407