BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem127c04
         (969 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AY772453.1| Zea mays RFLP probe npi414 (CBM 8.08) genomic seq...   188   3e-44
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   188   3e-44
dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic D...   188   3e-44
dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D...   188   3e-44
dbj|AK066279.1| Oryza sativa (japonica cultivar-group) cDNA clon...   188   3e-44

>gb|AY772453.1| Zea mays RFLP probe npi414 (CBM 8.08) genomic sequence
          Length = 893

 Score =  188 bits (95), Expect = 3e-44
 Identities = 134/147 (91%)
 Strand = Plus / Minus

                                                                       
Query: 576 caggagtcgagagggctatctcttgcaggatttgtgagctggttcatctggggctcagca 635
           |||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 321 caggagtcaagagggatatctcttgcaggatttgtgagctggttcatctggcgctcggca 262

                                                                       
Query: 636 tacctaactcgtgtaattagctggaggaataggctttatgtggctatcaattggctgacc 695
           ||  ||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 261 tatttaactcgtgttgttagctggaggaataggttctatgtggctatcaattggctgacc 202

                                      
Query: 696 acgctcttatttggtcgagacataagc 722
           || ||||||||||| || |||||||||
Sbjct: 201 actctcttatttggccgggacataagc 175


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  188 bits (95), Expect = 3e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                            
Query: 570      tattgtcaggagtcgagagggctatctcttgcaggatttgtgagctggttcatctggggc 629
                ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 35506041 tattgtcaggaatcgaaagggatatctcttgcaggatttgtgagctggttcatctggcgc 35506100

                                                                            
Query: 630      tcagcatacctaactcgtgtaattagctggaggaataggctttatgtggctatcaattgg 689
                ||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||
Sbjct: 35506101 tcagcatacctgactcgtgttgttagctggaggaacaggttttatgtggctatcaactgg 35506160

                                                           
Query: 690      ctgaccacgctcttatttggtcgagacataagccatatctagg 732
                |||||||| || |||||||| || ||||| |||| ||| ||||
Sbjct: 35506161 ctgaccacactgttatttggccgtgacattagccgtatttagg 35506203


>dbj|AP003252.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0446G04
          Length = 143515

 Score =  188 bits (95), Expect = 3e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                         
Query: 570   tattgtcaggagtcgagagggctatctcttgcaggatttgtgagctggttcatctggggc 629
             ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 36228 tattgtcaggaatcgaaagggatatctcttgcaggatttgtgagctggttcatctggcgc 36287

                                                                         
Query: 630   tcagcatacctaactcgtgtaattagctggaggaataggctttatgtggctatcaattgg 689
             ||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||
Sbjct: 36288 tcagcatacctgactcgtgttgttagctggaggaacaggttttatgtggctatcaactgg 36347

                                                        
Query: 690   ctgaccacgctcttatttggtcgagacataagccatatctagg 732
             |||||||| || |||||||| || ||||| |||| ||| ||||
Sbjct: 36348 ctgaccacactgttatttggccgtgacattagccgtatttagg 36390


>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1088C09
          Length = 154084

 Score =  188 bits (95), Expect = 3e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                          
Query: 570    tattgtcaggagtcgagagggctatctcttgcaggatttgtgagctggttcatctggggc 629
              ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 129990 tattgtcaggaatcgaaagggatatctcttgcaggatttgtgagctggttcatctggcgc 130049

                                                                          
Query: 630    tcagcatacctaactcgtgtaattagctggaggaataggctttatgtggctatcaattgg 689
              ||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||
Sbjct: 130050 tcagcatacctgactcgtgttgttagctggaggaacaggttttatgtggctatcaactgg 130109

                                                         
Query: 690    ctgaccacgctcttatttggtcgagacataagccatatctagg 732
              |||||||| || |||||||| || ||||| |||| ||| ||||
Sbjct: 130110 ctgaccacactgttatttggccgtgacattagccgtatttagg 130152


>dbj|AK066279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062I18, full
            insert sequence
          Length = 2505

 Score =  188 bits (95), Expect = 3e-44
 Identities = 146/163 (89%)
 Strand = Plus / Plus

                                                                        
Query: 570  tattgtcaggagtcgagagggctatctcttgcaggatttgtgagctggttcatctggggc 629
            ||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 2199 tattgtcaggaatcgaaagggatatctcttgcaggatttgtgagctggttcatctggcgc 2258

                                                                        
Query: 630  tcagcatacctaactcgtgtaattagctggaggaataggctttatgtggctatcaattgg 689
            ||||||||||| ||||||||  ||||||||||||| ||| |||||||||||||||| |||
Sbjct: 2259 tcagcatacctgactcgtgttgttagctggaggaacaggttttatgtggctatcaactgg 2318

                                                       
Query: 690  ctgaccacgctcttatttggtcgagacataagccatatctagg 732
            |||||||| || |||||||| || ||||| |||| ||| ||||
Sbjct: 2319 ctgaccacactgttatttggccgtgacattagccgtatttagg 2361