BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem127b05 (1079 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK104052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 1e-89 dbj|AK073887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 1e-89 ref|NM_001070131.1| Oryza sativa (japonica cultivar-group) Os09g... 331 3e-87 emb|CT831906.1| Oryza sativa (indica cultivar-group) cDNA clone:... 323 8e-85 gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome... 184 5e-43 >dbj|AK104052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-C12, full insert sequence Length = 969 Score = 339 bits (171), Expect = 1e-89 Identities = 314/361 (86%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 105 tagcatgagtactgtcagcggcgcacggcgtgccccaaggaggcaatcgcaagatggatc 164 |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| | Sbjct: 3 tagcatgagtactgtcagcggcactcggcgtgccccaaggaggcaatcacaagatggtcc 62 Query: 165 tactgataaagttgttgtgaacttggatgcaagctcc---ccagtggtggggagccatcg 221 | ||||||||| ||||||||| |||| || | |||| |||||||| || |||| ||| Sbjct: 63 tggtgataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcg 122 Query: 222 tggcgtatcaacctccgctggtgcacgcacctcacccattgatgtggaagctctcgaaga 281 | || | |||||| ||||||| ||| |||| |||||||||||||||||||| || || Sbjct: 123 cgcggtgccgacctccactggtgcgcgcgcctcccccattgatgtggaagctctggatga 182 Query: 282 tgaagtgcaggcagtatcgccttcacaagtgcctcctcagaggaggaaccgaagagctag 341 |||||||||| || | || |||| ||||||||||||| ||| |||||||| ||| |||| Sbjct: 183 tgaagtgcagacattgtccgcttcgcaagtgcctcctccgagaaggaaccggagaactag 242 Query: 342 gaggcagcctgtggcagtagttgatctggaggtagatgctagccaggaagggaataaacg 401 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 243 gaggcagcctgtggcagtagttgatctggaagtagatgctagccgggaagggaacaaacg 302 Query: 402 tcaaagggttgcacctgtaatacattgcctttctccagaaaggggagaaggatccagctt 461 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 303 tcaaagggttgcacctgttatacactgcctctctccagaaaggggagaagggtccagctt 362 Query: 462 g 462 | Sbjct: 363 g 363 Score = 198 bits (100), Expect = 3e-47 Identities = 193/224 (86%) Strand = Plus / Plus Query: 512 caaaggaaccaagttttacctgcccagtgtgttggaacaagctggaggaaccctccacaa 571 |||||||||| ||||| ||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 389 caaaggaaccggtttttaactgtccggtgtgttggaacaagttggaggagccctccacaa 448 Query: 572 caatttgtggccatatcttctgtgcgaagtgtatcaagcaagcaatccaggtccagaaga 631 ||||||| |||||||||||||| ||| || ||||||||||| |||||| | ||||||| Sbjct: 449 caatttgcggccatatcttctgcacgacatgcatcaagcaagccatccagattcagaaga 508 Query: 632 aatgtcctacttgccggaagagcctgagaattaacaatttccatcgtatttaccttccaa 691 |||| ||||||||| | ||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 509 aatgccctacttgcagaaagagtctgagggcgaacaatttccaccgtatttaccttccaa 568 Query: 692 actctgatggttaaggttcattggatgtgcataaggaacttctg 735 |||||||| ||||||| ||||||||||| | |||||||||||| Sbjct: 569 actctgatagttaaggctcattggatgtaccaaaggaacttctg 612 >dbj|AK073887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P09, full insert sequence Length = 1146 Score = 339 bits (171), Expect = 1e-89 Identities = 314/361 (86%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 105 tagcatgagtactgtcagcggcgcacggcgtgccccaaggaggcaatcgcaagatggatc 164 |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| | Sbjct: 180 tagcatgagtactgtcagcggcactcggcgtgccccaaggaggcaatcacaagatggtcc 239 Query: 165 tactgataaagttgttgtgaacttggatgcaagctcc---ccagtggtggggagccatcg 221 | ||||||||| ||||||||| |||| || | |||| |||||||| || |||| ||| Sbjct: 240 tggtgataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcg 299 Query: 222 tggcgtatcaacctccgctggtgcacgcacctcacccattgatgtggaagctctcgaaga 281 | || | |||||| ||||||| ||| |||| |||||||||||||||||||| || || Sbjct: 300 cgcggtgccgacctccactggtgcgcgcgcctcccccattgatgtggaagctctggatga 359 Query: 282 tgaagtgcaggcagtatcgccttcacaagtgcctcctcagaggaggaaccgaagagctag 341 |||||||||| || | || |||| ||||||||||||| ||| |||||||| ||| |||| Sbjct: 360 tgaagtgcagacattgtccgcttcgcaagtgcctcctccgagaaggaaccggagaactag 419 Query: 342 gaggcagcctgtggcagtagttgatctggaggtagatgctagccaggaagggaataaacg 401 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 420 gaggcagcctgtggcagtagttgatctggaagtagatgctagccgggaagggaacaaacg 479 Query: 402 tcaaagggttgcacctgtaatacattgcctttctccagaaaggggagaaggatccagctt 461 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 480 tcaaagggttgcacctgttatacactgcctctctccagaaaggggagaagggtccagctt 539 Query: 462 g 462 | Sbjct: 540 g 540 Score = 198 bits (100), Expect = 3e-47 Identities = 193/224 (86%) Strand = Plus / Plus Query: 512 caaaggaaccaagttttacctgcccagtgtgttggaacaagctggaggaaccctccacaa 571 |||||||||| ||||| ||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 566 caaaggaaccggtttttaactgtccggtgtgttggaacaagttggaggagccctccacaa 625 Query: 572 caatttgtggccatatcttctgtgcgaagtgtatcaagcaagcaatccaggtccagaaga 631 ||||||| |||||||||||||| ||| || ||||||||||| |||||| | ||||||| Sbjct: 626 caatttgcggccatatcttctgcacgacatgcatcaagcaagccatccagattcagaaga 685 Query: 632 aatgtcctacttgccggaagagcctgagaattaacaatttccatcgtatttaccttccaa 691 |||| ||||||||| | ||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 686 aatgccctacttgcagaaagagtctgagggcgaacaatttccaccgtatttaccttccaa 745 Query: 692 actctgatggttaaggttcattggatgtgcataaggaacttctg 735 |||||||| ||||||| ||||||||||| | |||||||||||| Sbjct: 746 actctgatagttaaggctcattggatgtaccaaaggaacttctg 789 >ref|NM_001070131.1| Oryza sativa (japonica cultivar-group) Os09g0504700 (Os09g0504700) mRNA, complete cds Length = 474 Score = 331 bits (167), Expect = 3e-87 Identities = 310/357 (86%), Gaps = 3/357 (0%) Strand = Plus / Plus Query: 109 atgagtactgtcagcggcgcacggcgtgccccaaggaggcaatcgcaagatggatctact 168 |||||||||||||||||| | ||||||||||||||||||||||| |||||||| || | Sbjct: 1 atgagtactgtcagcggcactcggcgtgccccaaggaggcaatcacaagatggtcctggt 60 Query: 169 gataaagttgttgtgaacttggatgcaagctcc---ccagtggtggggagccatcgtggc 225 |||||||| ||||||||| |||| || | |||| |||||||| || |||| ||| | Sbjct: 61 gataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcgcgcg 120 Query: 226 gtatcaacctccgctggtgcacgcacctcacccattgatgtggaagctctcgaagatgaa 285 || | |||||| ||||||| ||| |||| |||||||||||||||||||| || |||||| Sbjct: 121 gtgccgacctccactggtgcgcgcgcctcccccattgatgtggaagctctggatgatgaa 180 Query: 286 gtgcaggcagtatcgccttcacaagtgcctcctcagaggaggaaccgaagagctaggagg 345 |||||| || | || |||| ||||||||||||| ||| |||||||| ||| |||||||| Sbjct: 181 gtgcagacattgtccgcttcgcaagtgcctcctccgagaaggaaccggagaactaggagg 240 Query: 346 cagcctgtggcagtagttgatctggaggtagatgctagccaggaagggaataaacgtcaa 405 |||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||| Sbjct: 241 cagcctgtggcagtagttgatctggaagtagatgctagccgggaagggaacaaacgtcaa 300 Query: 406 agggttgcacctgtaatacattgcctttctccagaaaggggagaaggatccagcttg 462 |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||||| Sbjct: 301 agggttgcacctgttatacactgcctctctccagaaaggggagaagggtccagcttg 357 >emb|CT831906.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107E03, full insert sequence Length = 1183 Score = 323 bits (163), Expect = 8e-85 Identities = 312/361 (86%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 105 tagcatgagtactgtcagcggcgcacggcgtgccccaaggaggcaatcgcaagatggatc 164 |||||||||||||||||||||| | |||||||||||||| |||||||| |||||||| | Sbjct: 182 tagcatgagtactgtcagcggcactcggcgtgccccaagaaggcaatcacaagatggtcc 241 Query: 165 tactgataaagttgttgtgaacttggatgcaagctcc---ccagtggtggggagccatcg 221 | ||||||||| ||||||||| |||| || | |||| |||||||| || |||| ||| Sbjct: 242 tggtgataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcg 301 Query: 222 tggcgtatcaacctccgctggtgcacgcacctcacccattgatgtggaagctctcgaaga 281 | || | |||||| ||||||| || |||| |||||||||||||||||||| || || Sbjct: 302 cgcggtgccgacctccactggtgcgcgtgcctcccccattgatgtggaagctctggatga 361 Query: 282 tgaagtgcaggcagtatcgccttcacaagtgcctcctcagaggaggaaccgaagagctag 341 |||||||||| || | || |||| ||||||||||||| ||| |||||||| ||| |||| Sbjct: 362 tgaagtgcagacattgtccgcttcgcaagtgcctcctccgagaaggaaccggagaactag 421 Query: 342 gaggcagcctgtggcagtagttgatctggaggtagatgctagccaggaagggaataaacg 401 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 422 gaggcagcctgtggcagtagttgatctggaagtagatgctagccgggaagggaacaaacg 481 Query: 402 tcaaagggttgcacctgtaatacattgcctttctccagaaaggggagaaggatccagctt 461 |||||||||||||||||| ||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 482 tcaaagggttgcacctgttatacactgcctctctccagaaaggggagaagggtccagctt 541 Query: 462 g 462 | Sbjct: 542 g 542 Score = 198 bits (100), Expect = 3e-47 Identities = 193/224 (86%) Strand = Plus / Plus Query: 512 caaaggaaccaagttttacctgcccagtgtgttggaacaagctggaggaaccctccacaa 571 |||||||||| ||||| ||| || ||||||||||||||| ||||||| |||||||||| Sbjct: 568 caaaggaaccggtttttaactgtccggtgtgttggaacaagttggaggagccctccacaa 627 Query: 572 caatttgtggccatatcttctgtgcgaagtgtatcaagcaagcaatccaggtccagaaga 631 ||||||| |||||||||||||| ||| || ||||||||||| |||||| | ||||||| Sbjct: 628 caatttgcggccatatcttctgcacgacatgcatcaagcaagccatccagattcagaaga 687 Query: 632 aatgtcctacttgccggaagagcctgagaattaacaatttccatcgtatttaccttccaa 691 |||| ||||||||| | ||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 688 aatgccctacttgcagaaagagtctgagggcgaacaatttccaccgtatttaccttccaa 747 Query: 692 actctgatggttaaggttcattggatgtgcataaggaacttctg 735 |||||||| ||||||| ||||||||||| | |||||||||||| Sbjct: 748 actctgatagttaaggctcattggatgtaccaaaggaacttctg 791 >gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 184 bits (93), Expect = 5e-43 Identities = 203/240 (84%), Gaps = 6/240 (2%) Strand = Plus / Minus Query: 469 aacaatgctgtgaaaactagccaagagcctgctaaggtggctccaaaggaaccaagtttt 528 |||||||||||||| |||||| | |||||| |||||| |||||||||| |||| Sbjct: 142804 aacaatgctgtgaagactagcaatgagcctcctaagg------caaaggaaccggttttt 142751 Query: 529 acctgcccagtgtgttggaacaagctggaggaaccctccacaacaatttgtggccatatc 588 | ||| || ||||||||||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 142750 aactgtccggtgtgttggaacaagttggaggagccctccacaacaatttgcggccatatc 142691 Query: 589 ttctgtgcgaagtgtatcaagcaagcaatccaggtccagaagaaatgtcctacttgccgg 648 ||||| ||| || ||||||||||| |||||| | ||||||||||| ||||||||| | Sbjct: 142690 ttctgcacgacatgcatcaagcaagccatccagattcagaagaaatgccctacttgcaga 142631 Query: 649 aagagcctgagaattaacaatttccatcgtatttaccttccaaactctgatggttaaggt 708 ||||| ||||| ||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 142630 aagagtctgagggcgaacaatttccaccgtatttaccttccaaactctgatagttaaggt 142571 Score = 143 bits (72), Expect = 2e-30 Identities = 182/218 (83%), Gaps = 3/218 (1%) Strand = Plus / Minus Query: 105 tagcatgagtactgtcagcggcgcacggcgtgccccaaggaggcaatcgcaagatggatc 164 |||||||||||||||||||||| | ||||||||||||||||||||||| |||||||| | Sbjct: 144742 tagcatgagtactgtcagcggcactcggcgtgccccaaggaggcaatcacaagatggtcc 144683 Query: 165 tactgataaagttgttgtgaacttggatgcaa---gctccccagtggtggggagccatcg 221 | ||||||||| ||||||||| |||| || | |||||||||||| || |||| ||| Sbjct: 144682 tggtgataaagtcgttgtgaacctggacgcgatctcctccccagtggttggaagccgtcg 144623 Query: 222 tggcgtatcaacctccgctggtgcacgcacctcacccattgatgtggaagctctcgaaga 281 | || | |||||| ||||||| ||| |||| |||||||||||||||||||| || || Sbjct: 144622 cgcggtgccgacctccactggtgcgcgcgcctcccccattgatgtggaagctctggatga 144563 Query: 282 tgaagtgcaggcagtatcgccttcacaagtgcctcctc 319 |||||||||| || | || |||| ||||||||||||| Sbjct: 144562 tgaagtgcagacattgtccgcttcgcaagtgcctcctc 144525 Score = 107 bits (54), Expect = 9e-20 Identities = 69/74 (93%) Strand = Plus / Minus Query: 319 cagaggaggaaccgaagagctaggaggcagcctgtggcagtagttgatctggaggtagat 378 ||||| |||||||| ||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 144270 cagagaaggaaccggagaactaggaggcagcctgtggcagtagttgatctggaagtagat 144211 Query: 379 gctagccaggaagg 392 ||||||| |||||| Sbjct: 144210 gctagccgggaagg 144197 Score = 105 bits (53), Expect = 4e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 390 agggaataaacgtcaaagggttgcacctgtaatacattgcctttctccagaaaggggaga 449 |||||| ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| Sbjct: 144002 agggaacaaacgtcaaagggttgcacctgttatacactgcctctctccagaaaggggaga 143943 Query: 450 aggatccagcttg 462 ||| ||||||||| Sbjct: 143942 agggtccagcttg 143930