BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem127a07 (1056 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059899.1| Oryza sativa (japonica cultivar-group) Os04g... 944 0.0 dbj|AK061581.1| Oryza sativa (japonica cultivar-group) cDNA clon... 944 0.0 emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 684 0.0 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 684 0.0 emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4,... 684 0.0 >ref|NM_001059899.1| Oryza sativa (japonica cultivar-group) Os04g0526800 (Os04g0526800) mRNA, complete cds Length = 1103 Score = 944 bits (476), Expect = 0.0 Identities = 630/680 (92%), Gaps = 6/680 (0%) Strand = Plus / Plus Query: 121 ccatgtgatcggagtcccggtgacctccaaggcgtatggcatagaggagg---tgtcga- 176 |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 150 ccatgtcatcggagtcccggtgaccgccaaggcgtttggcatagaggaggaggtgtcgtt 209 Query: 177 --cccgggatcaatcgttcaggaaggttgacggcgatcaccttgctgtctcgttgacgca 234 || ||| || ||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 210 ggccaggggccagtcgttcaggaaggccgacggcgatcaccttgcggtctcgttgtcgca 269 Query: 235 ccccagcccttatgcgtctttcggctataagcacagcagcaagggtcaggtgatccactg 294 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 270 ccccagcccttatacgtctttcggctataagcacagcagcaagggtcaggttatccactg 329 Query: 295 ggtgagcaagctgagcagaagggcccagggcttccgggagcatgtgacgttggggccaaa 354 |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 330 ggtgagcaagctgagcagaagggcacagggcttcagggagcatgtgaccttggggccaaa 389 Query: 355 gctatcggagaccgtcaaggggaagctgagcttgggcgcgaggatcctgcaggccggcgg 414 ||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 390 gctgtcggagacggtgaaggggaagctgagcctgggcgcgaaaatcctgcaggccggcgg 449 Query: 415 gatcgagcgcgtgttccggcaggcgttctcagccgagaaaggcgagcggctggtgaaggc 474 ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 450 gatcgagcgcgtgttccggaaggcgttctcggcggagaaaggcgagcggctggtgaaggc 509 Query: 475 gctgcagtgctacctgtacaccaccggcggccccatcgccggggtgctcttcgtctccac 534 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 510 gctgcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccac 569 Query: 535 caagaaggtcgccttccgcagcgaccggtccgtcacggtcacctcgcccaagggcgacgt 594 |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| Sbjct: 570 caagaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgt 629 Query: 595 ggcgcgggtgccctacaaggtggtgatcccgctcaagaggatcgacaaggtccggccgag 654 |||||||||||||||||||||||| ||||||||| |||||||| | |||| |||||||| Sbjct: 630 cgcgcgggtgccctacaaggtggtggtcccgctcaggaggatcgcccaggtgcggccgag 689 Query: 655 cgagaacgtcgacaagccggaggagaagtacatacacgtcgtcacggtggacgggtttga 714 |||||| | |||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 690 cgagaatgccgacaagccggaggagaagtacatccacgtcgtcacggtggacggcttcga 749 Query: 715 gttctggttcctggggttcgtgagctaccagaggtcctgcaagtacatgcagcaagccat 774 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 750 gttctggttcatggggttcgtgagctaccagaggtcgtgcaagtacatgcagcaagccat 809 Query: 775 ctcggagctgcaatgactag 794 |||||||||||||||||||| Sbjct: 810 ctcggagctgcaatgactag 829 >dbj|AK061581.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H09, full insert sequence Length = 1103 Score = 944 bits (476), Expect = 0.0 Identities = 630/680 (92%), Gaps = 6/680 (0%) Strand = Plus / Plus Query: 121 ccatgtgatcggagtcccggtgacctccaaggcgtatggcatagaggagg---tgtcga- 176 |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 150 ccatgtcatcggagtcccggtgaccgccaaggcgtttggcatagaggaggaggtgtcgtt 209 Query: 177 --cccgggatcaatcgttcaggaaggttgacggcgatcaccttgctgtctcgttgacgca 234 || ||| || ||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 210 ggccaggggccagtcgttcaggaaggccgacggcgatcaccttgcggtctcgttgtcgca 269 Query: 235 ccccagcccttatgcgtctttcggctataagcacagcagcaagggtcaggtgatccactg 294 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 270 ccccagcccttatacgtctttcggctataagcacagcagcaagggtcaggttatccactg 329 Query: 295 ggtgagcaagctgagcagaagggcccagggcttccgggagcatgtgacgttggggccaaa 354 |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| Sbjct: 330 ggtgagcaagctgagcagaagggcacagggcttcagggagcatgtgaccttggggccaaa 389 Query: 355 gctatcggagaccgtcaaggggaagctgagcttgggcgcgaggatcctgcaggccggcgg 414 ||| |||||||| || ||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 390 gctgtcggagacggtgaaggggaagctgagcctgggcgcgaaaatcctgcaggccggcgg 449 Query: 415 gatcgagcgcgtgttccggcaggcgttctcagccgagaaaggcgagcggctggtgaaggc 474 ||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||| Sbjct: 450 gatcgagcgcgtgttccggaaggcgttctcggcggagaaaggcgagcggctggtgaaggc 509 Query: 475 gctgcagtgctacctgtacaccaccggcggccccatcgccggggtgctcttcgtctccac 534 |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct: 510 gctgcagtgctacctgtacaccaccggcgggcccatcgccgggatgctcttcgtctccac 569 Query: 535 caagaaggtcgccttccgcagcgaccggtccgtcacggtcacctcgcccaagggcgacgt 594 |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| Sbjct: 570 caagaaggtcgccttccgcagcgaccggccggtcacggtcacctcggccaagggcgacgt 629 Query: 595 ggcgcgggtgccctacaaggtggtgatcccgctcaagaggatcgacaaggtccggccgag 654 |||||||||||||||||||||||| ||||||||| |||||||| | |||| |||||||| Sbjct: 630 cgcgcgggtgccctacaaggtggtggtcccgctcaggaggatcgcccaggtgcggccgag 689 Query: 655 cgagaacgtcgacaagccggaggagaagtacatacacgtcgtcacggtggacgggtttga 714 |||||| | |||||||||||||||||||||||| |||||||||||||||||||| || || Sbjct: 690 cgagaatgccgacaagccggaggagaagtacatccacgtcgtcacggtggacggcttcga 749 Query: 715 gttctggttcctggggttcgtgagctaccagaggtcctgcaagtacatgcagcaagccat 774 |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 750 gttctggttcatggggttcgtgagctaccagaggtcgtgcaagtacatgcagcaagccat 809 Query: 775 ctcggagctgcaatgactag 794 |||||||||||||||||||| Sbjct: 810 ctcggagctgcaatgactag 829 >emb|CR855230.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0115K01-H0319F09, complete sequence Length = 189580 Score = 684 bits (345), Expect = 0.0 Identities = 429/457 (93%) Strand = Plus / Minus Query: 338 gtgacgttggggccaaagctatcggagaccgtcaaggggaagctgagcttgggcgcgagg 397 ||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| Sbjct: 53381 gtgaccttggggccaaagctgtcggagacggtgaaggggaagctgagcctgggcgcgaaa 53322 Query: 398 atcctgcaggccggcgggatcgagcgcgtgttccggcaggcgttctcagccgagaaaggc 457 |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct: 53321 atcctgcaggccggcgggatcgagcgcgtgttccggaaggcgttctcggcggagaaaggc 53262 Query: 458 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcggccccatcgccggg 517 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 53261 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcgggcccatcgccggg 53202 Query: 518 gtgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggtccgtcacggtcacc 577 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 53201 atgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggccggtcacggtcacc 53142 Query: 578 tcgcccaagggcgacgtggcgcgggtgccctacaaggtggtgatcccgctcaagaggatc 637 ||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 53141 tcggccaagggcgacgtcgcgcgggtgccctacaaggtggtggtcccgctcaggaggatc 53082 Query: 638 gacaaggtccggccgagcgagaacgtcgacaagccggaggagaagtacatacacgtcgtc 697 | | |||| |||||||||||||| | |||||||||||||||||||||||| ||||||||| Sbjct: 53081 gcccaggtgcggccgagcgagaatgccgacaagccggaggagaagtacatccacgtcgtc 53022 Query: 698 acggtggacgggtttgagttctggttcctggggttcgtgagctaccagaggtcctgcaag 757 ||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 53021 acggtggacggcttcgagttctggttcatggggttcgtgagctaccagaggtcgtgcaag 52962 Query: 758 tacatgcagcaagccatctcggagctgcaatgactag 794 ||||||||||||||||||||||||||||||||||||| Sbjct: 52961 tacatgcagcaagccatctcggagctgcaatgactag 52925 Score = 151 bits (76), Expect = 7e-33 Identities = 137/156 (87%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 121 ccatgtgatcggagtcccggtgacctccaaggcgtatggcatagaggagg---tgtcga- 176 |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 53831 ccatgtcatcggagtcccggtgaccgccaaggcgtttggcatagaggaggaggtgtcgtt 53772 Query: 177 --cccgggatcaatcgttcaggaaggttgacggcgatcaccttgctgtctcgttgacgca 234 || ||| || ||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 53771 ggccaggggccagtcgttcaggaaggccgacggcgatcaccttgcggtctcgttgtcgca 53712 Query: 235 ccccagcccttatgcgtctttcggctataagcacag 270 ||||||||||||| |||||||||||||||||||||| Sbjct: 53711 ccccagcccttatacgtctttcggctataagcacag 53676 Score = 113 bits (57), Expect = 1e-21 Identities = 66/69 (95%) Strand = Plus / Minus Query: 270 gcagcaagggtcaggtgatccactgggtgagcaagctgagcagaagggcccagggcttcc 329 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 53569 gcagcaagggtcaggttatccactgggtgagcaagctgagcagaagggcacagggcttca 53510 Query: 330 gggagcatg 338 ||||||||| Sbjct: 53509 gggagcatg 53501 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 684 bits (345), Expect = 0.0 Identities = 429/457 (93%) Strand = Plus / Minus Query: 338 gtgacgttggggccaaagctatcggagaccgtcaaggggaagctgagcttgggcgcgagg 397 ||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| Sbjct: 26316621 gtgaccttggggccaaagctgtcggagacggtgaaggggaagctgagcctgggcgcgaaa 26316562 Query: 398 atcctgcaggccggcgggatcgagcgcgtgttccggcaggcgttctcagccgagaaaggc 457 |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct: 26316561 atcctgcaggccggcgggatcgagcgcgtgttccggaaggcgttctcggcggagaaaggc 26316502 Query: 458 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcggccccatcgccggg 517 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 26316501 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcgggcccatcgccggg 26316442 Query: 518 gtgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggtccgtcacggtcacc 577 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 26316441 atgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggccggtcacggtcacc 26316382 Query: 578 tcgcccaagggcgacgtggcgcgggtgccctacaaggtggtgatcccgctcaagaggatc 637 ||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 26316381 tcggccaagggcgacgtcgcgcgggtgccctacaaggtggtggtcccgctcaggaggatc 26316322 Query: 638 gacaaggtccggccgagcgagaacgtcgacaagccggaggagaagtacatacacgtcgtc 697 | | |||| |||||||||||||| | |||||||||||||||||||||||| ||||||||| Sbjct: 26316321 gcccaggtgcggccgagcgagaatgccgacaagccggaggagaagtacatccacgtcgtc 26316262 Query: 698 acggtggacgggtttgagttctggttcctggggttcgtgagctaccagaggtcctgcaag 757 ||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 26316261 acggtggacggcttcgagttctggttcatggggttcgtgagctaccagaggtcgtgcaag 26316202 Query: 758 tacatgcagcaagccatctcggagctgcaatgactag 794 ||||||||||||||||||||||||||||||||||||| Sbjct: 26316201 tacatgcagcaagccatctcggagctgcaatgactag 26316165 Score = 151 bits (76), Expect = 7e-33 Identities = 137/156 (87%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 121 ccatgtgatcggagtcccggtgacctccaaggcgtatggcatagaggagg---tgtcga- 176 |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 26317071 ccatgtcatcggagtcccggtgaccgccaaggcgtttggcatagaggaggaggtgtcgtt 26317012 Query: 177 --cccgggatcaatcgttcaggaaggttgacggcgatcaccttgctgtctcgttgacgca 234 || ||| || ||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 26317011 ggccaggggccagtcgttcaggaaggccgacggcgatcaccttgcggtctcgttgtcgca 26316952 Query: 235 ccccagcccttatgcgtctttcggctataagcacag 270 ||||||||||||| |||||||||||||||||||||| Sbjct: 26316951 ccccagcccttatacgtctttcggctataagcacag 26316916 Score = 113 bits (57), Expect = 1e-21 Identities = 66/69 (95%) Strand = Plus / Minus Query: 270 gcagcaagggtcaggtgatccactgggtgagcaagctgagcagaagggcccagggcttcc 329 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 26316809 gcagcaagggtcaggttatccactgggtgagcaagctgagcagaagggcacagggcttca 26316750 Query: 330 gggagcatg 338 ||||||||| Sbjct: 26316749 gggagcatg 26316741 >emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 684 bits (345), Expect = 0.0 Identities = 429/457 (93%) Strand = Plus / Minus Query: 338 gtgacgttggggccaaagctatcggagaccgtcaaggggaagctgagcttgggcgcgagg 397 ||||| |||||||||||||| |||||||| || ||||||||||||||| ||||||||| Sbjct: 93198 gtgaccttggggccaaagctgtcggagacggtgaaggggaagctgagcctgggcgcgaaa 93139 Query: 398 atcctgcaggccggcgggatcgagcgcgtgttccggcaggcgttctcagccgagaaaggc 457 |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||| Sbjct: 93138 atcctgcaggccggcgggatcgagcgcgtgttccggaaggcgttctcggcggagaaaggc 93079 Query: 458 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcggccccatcgccggg 517 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 93078 gagcggctggtgaaggcgctgcagtgctacctgtacaccaccggcgggcccatcgccggg 93019 Query: 518 gtgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggtccgtcacggtcacc 577 |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 93018 atgctcttcgtctccaccaagaaggtcgccttccgcagcgaccggccggtcacggtcacc 92959 Query: 578 tcgcccaagggcgacgtggcgcgggtgccctacaaggtggtgatcccgctcaagaggatc 637 ||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 92958 tcggccaagggcgacgtcgcgcgggtgccctacaaggtggtggtcccgctcaggaggatc 92899 Query: 638 gacaaggtccggccgagcgagaacgtcgacaagccggaggagaagtacatacacgtcgtc 697 | | |||| |||||||||||||| | |||||||||||||||||||||||| ||||||||| Sbjct: 92898 gcccaggtgcggccgagcgagaatgccgacaagccggaggagaagtacatccacgtcgtc 92839 Query: 698 acggtggacgggtttgagttctggttcctggggttcgtgagctaccagaggtcctgcaag 757 ||||||||||| || |||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 92838 acggtggacggcttcgagttctggttcatggggttcgtgagctaccagaggtcgtgcaag 92779 Query: 758 tacatgcagcaagccatctcggagctgcaatgactag 794 ||||||||||||||||||||||||||||||||||||| Sbjct: 92778 tacatgcagcaagccatctcggagctgcaatgactag 92742 Score = 151 bits (76), Expect = 7e-33 Identities = 137/156 (87%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 121 ccatgtgatcggagtcccggtgacctccaaggcgtatggcatagaggagg---tgtcga- 176 |||||| |||||||||||||||||| ||||||||| |||||||||||||| ||||| Sbjct: 93648 ccatgtcatcggagtcccggtgaccgccaaggcgtttggcatagaggaggaggtgtcgtt 93589 Query: 177 --cccgggatcaatcgttcaggaaggttgacggcgatcaccttgctgtctcgttgacgca 234 || ||| || ||||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 93588 ggccaggggccagtcgttcaggaaggccgacggcgatcaccttgcggtctcgttgtcgca 93529 Query: 235 ccccagcccttatgcgtctttcggctataagcacag 270 ||||||||||||| |||||||||||||||||||||| Sbjct: 93528 ccccagcccttatacgtctttcggctataagcacag 93493 Score = 113 bits (57), Expect = 1e-21 Identities = 66/69 (95%) Strand = Plus / Minus Query: 270 gcagcaagggtcaggtgatccactgggtgagcaagctgagcagaagggcccagggcttcc 329 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 93386 gcagcaagggtcaggttatccactgggtgagcaagctgagcagaagggcacagggcttca 93327 Query: 330 gggagcatg 338 ||||||||| Sbjct: 93326 gggagcatg 93318