BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem127a04 (983 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001050842.1| Oryza sativa (japonica cultivar-group) Os01g... 387 e-104 dbj|AK111031.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102 dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102 dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 383 e-102 >ref|NM_001050842.1| Oryza sativa (japonica cultivar-group) Os01g0759000 (Os01g0759000) mRNA, complete cds Length = 989 Score = 387 bits (195), Expect = e-104 Identities = 338/385 (87%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 398 cccgcaggccgccgctgtgagggcgtgccgcgcgttcttcggggagcacgtggacgacga 457 ||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||| |||| Sbjct: 423 cccgcaggccgccgccgtggaggcttgccgcgccttcttcggtgagcacgtcgaccacga 482 Query: 458 cgacgacggcgacgaggaggagga---ggagcaaggcagtgttgcccggttcttcgagga 514 ||||| || ||||||||| ||||| |||| |||||| ||| |||||||||||| |||| Sbjct: 483 cgacggcgacgacgaggatgaggaagaggaggaaggcaatgtggcccggttcttccagga 542 Query: 515 gctgctggagaaagacgcgggcctgagggggttgtacgaggcggagcgggagagggggcg 574 ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 543 gctactggagaaggacgcgggcctgagggggttctacgaggcggagcgggagaagggccg 602 Query: 575 gttcctgtgcctggtgtgcgaggggatcagcgctagggcgggcaagaggttcgccggctg 634 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 603 gttcctgtgcctcgtgtgcgaggggatcggcgccagggcgggcaagaggttcgccggctg 662 Query: 635 cgccgcgctcgtgcagcacgccgggtcggttgcccggaccaaggggaggcttgcgcaccg 694 ||| |||||||||||||||||||| ||||| |||||| || | ||||| | |||||||| Sbjct: 663 cgcggcgctcgtgcagcacgccggatcggtcgcccgggccgggaggaggatggcgcaccg 722 Query: 695 cgcgttcgcagacgccgtcggccggctgctcggctggggcgcgggccggaccacgcccat 754 |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| | | Sbjct: 723 ggcgttcgcggacgccgtcggccggctgctgggctggagcgccggccggaccacggcttt 782 Query: 755 gccggcagattctgacaatgatggc 779 || | | ||||||||||||| |||| Sbjct: 783 gcagacggattctgacaatgctggc 807 Score = 190 bits (96), Expect = 7e-45 Identities = 144/160 (90%) Strand = Plus / Plus Query: 79 cctcccccgctccaaaccctagccaccaccagccgctcctccgggcagccaagtccacgg 138 |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||| |||| Sbjct: 101 cctccctcgctccaaaccctagccgccgccagccactcctccggccgggcaagtcgacgg 160 Query: 139 ccttcaagcgcgaggagcgccgcaagcacaaggagcgcaagcggcaggaccgcctcgccc 198 ||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| Sbjct: 161 ccttcaagcgcgaggagcgccgcaagcgcaaggagcgaaagcagcaggagcgcctcgccc 220 Query: 199 tcgagctagcgcggtgggagcccctcggcgcaccgccccg 238 |||| || | ||||||||||||||||||||| |||||||| Sbjct: 221 tcgatctcgagcggtgggagcccctcggcgccccgccccg 260 >dbj|AK111031.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-H09, full insert sequence Length = 989 Score = 387 bits (195), Expect = e-104 Identities = 338/385 (87%), Gaps = 3/385 (0%) Strand = Plus / Plus Query: 398 cccgcaggccgccgctgtgagggcgtgccgcgcgttcttcggggagcacgtggacgacga 457 ||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||| |||| Sbjct: 423 cccgcaggccgccgccgtggaggcttgccgcgccttcttcggtgagcacgtcgaccacga 482 Query: 458 cgacgacggcgacgaggaggagga---ggagcaaggcagtgttgcccggttcttcgagga 514 ||||| || ||||||||| ||||| |||| |||||| ||| |||||||||||| |||| Sbjct: 483 cgacggcgacgacgaggatgaggaagaggaggaaggcaatgtggcccggttcttccagga 542 Query: 515 gctgctggagaaagacgcgggcctgagggggttgtacgaggcggagcgggagagggggcg 574 ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 543 gctactggagaaggacgcgggcctgagggggttctacgaggcggagcgggagaagggccg 602 Query: 575 gttcctgtgcctggtgtgcgaggggatcagcgctagggcgggcaagaggttcgccggctg 634 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 603 gttcctgtgcctcgtgtgcgaggggatcggcgccagggcgggcaagaggttcgccggctg 662 Query: 635 cgccgcgctcgtgcagcacgccgggtcggttgcccggaccaaggggaggcttgcgcaccg 694 ||| |||||||||||||||||||| ||||| |||||| || | ||||| | |||||||| Sbjct: 663 cgcggcgctcgtgcagcacgccggatcggtcgcccgggccgggaggaggatggcgcaccg 722 Query: 695 cgcgttcgcagacgccgtcggccggctgctcggctggggcgcgggccggaccacgcccat 754 |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| | | Sbjct: 723 ggcgttcgcggacgccgtcggccggctgctgggctggagcgccggccggaccacggcttt 782 Query: 755 gccggcagattctgacaatgatggc 779 || | | ||||||||||||| |||| Sbjct: 783 gcagacggattctgacaatgctggc 807 Score = 182 bits (92), Expect = 2e-42 Identities = 143/160 (89%) Strand = Plus / Plus Query: 79 cctcccccgctccaaaccctagccaccaccagccgctcctccgggcagccaagtccacgg 138 |||||| ||||||||||||||||| || |||||| ||||||||| | | |||| | |||| Sbjct: 101 cctccctcgctccaaaccctagccgccgccagccactcctccggccgggcaagacgacgg 160 Query: 139 ccttcaagcgcgaggagcgccgcaagcacaaggagcgcaagcggcaggaccgcctcgccc 198 ||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| Sbjct: 161 ccttcaagcgcgaggagcgccgcaagcgcaaggagcgaaagcagcaggagcgcctcgccc 220 Query: 199 tcgagctagcgcggtgggagcccctcggcgcaccgccccg 238 |||| || | ||||||||||||||||||||| |||||||| Sbjct: 221 tcgatctcgagcggtgggagcccctcggcgccccgccccg 260 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 383 bits (193), Expect = e-102 Identities = 315/355 (88%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 398 cccgcaggccgccgctgtgagggcgtgccgcgcgttcttcggggagcacgtggacgacga 457 ||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||| |||| Sbjct: 31919546 cccgcaggccgccgccgtggaggcttgccgcgccttcttcggtgagcacgtcgaccacga 31919605 Query: 458 cgacgacggcgacgaggaggagga---ggagcaaggcagtgttgcccggttcttcgagga 514 ||||| || ||||||||| ||||| |||| |||||| ||| |||||||||||| |||| Sbjct: 31919606 cgacggcgacgacgaggatgaggaagaggaggaaggcaatgtggcccggttcttccagga 31919665 Query: 515 gctgctggagaaagacgcgggcctgagggggttgtacgaggcggagcgggagagggggcg 574 ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 31919666 gctactggagaaggacgcgggcctgagggggttctacgaggcggagcgggagaagggccg 31919725 Query: 575 gttcctgtgcctggtgtgcgaggggatcagcgctagggcgggcaagaggttcgccggctg 634 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 31919726 gttcctgtgcctcgtgtgcgaggggatcggcgccagggcgggcaagaggttcgccggctg 31919785 Query: 635 cgccgcgctcgtgcagcacgccgggtcggttgcccggaccaaggggaggcttgcgcaccg 694 ||| |||||||||||||||||||| ||||| |||||| || | ||||| | |||||||| Sbjct: 31919786 cgcggcgctcgtgcagcacgccggatcggtcgcccgggccgggaggaggatggcgcaccg 31919845 Query: 695 cgcgttcgcagacgccgtcggccggctgctcggctggggcgcgggccggaccacg 749 |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 31919846 ggcgttcgcggacgccgtcggccggctgctgggctggagcgccggccggaccacg 31919900 Score = 190 bits (96), Expect = 7e-45 Identities = 144/160 (90%) Strand = Plus / Plus Query: 79 cctcccccgctccaaaccctagccaccaccagccgctcctccgggcagccaagtccacgg 138 |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||| |||| Sbjct: 31919224 cctccctcgctccaaaccctagccgccgccagccactcctccggccgggcaagtcgacgg 31919283 Query: 139 ccttcaagcgcgaggagcgccgcaagcacaaggagcgcaagcggcaggaccgcctcgccc 198 ||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| Sbjct: 31919284 ccttcaagcgcgaggagcgccgcaagcgcaaggagcgaaagcagcaggagcgcctcgccc 31919343 Query: 199 tcgagctagcgcggtgggagcccctcggcgcaccgccccg 238 |||| || | ||||||||||||||||||||| |||||||| Sbjct: 31919344 tcgatctcgagcggtgggagcccctcggcgccccgccccg 31919383 >dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 383 bits (193), Expect = e-102 Identities = 315/355 (88%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 398 cccgcaggccgccgctgtgagggcgtgccgcgcgttcttcggggagcacgtggacgacga 457 ||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||| |||| Sbjct: 105624 cccgcaggccgccgccgtggaggcttgccgcgccttcttcggtgagcacgtcgaccacga 105683 Query: 458 cgacgacggcgacgaggaggagga---ggagcaaggcagtgttgcccggttcttcgagga 514 ||||| || ||||||||| ||||| |||| |||||| ||| |||||||||||| |||| Sbjct: 105684 cgacggcgacgacgaggatgaggaagaggaggaaggcaatgtggcccggttcttccagga 105743 Query: 515 gctgctggagaaagacgcgggcctgagggggttgtacgaggcggagcgggagagggggcg 574 ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 105744 gctactggagaaggacgcgggcctgagggggttctacgaggcggagcgggagaagggccg 105803 Query: 575 gttcctgtgcctggtgtgcgaggggatcagcgctagggcgggcaagaggttcgccggctg 634 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 105804 gttcctgtgcctcgtgtgcgaggggatcggcgccagggcgggcaagaggttcgccggctg 105863 Query: 635 cgccgcgctcgtgcagcacgccgggtcggttgcccggaccaaggggaggcttgcgcaccg 694 ||| |||||||||||||||||||| ||||| |||||| || | ||||| | |||||||| Sbjct: 105864 cgcggcgctcgtgcagcacgccggatcggtcgcccgggccgggaggaggatggcgcaccg 105923 Query: 695 cgcgttcgcagacgccgtcggccggctgctcggctggggcgcgggccggaccacg 749 |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 105924 ggcgttcgcggacgccgtcggccggctgctgggctggagcgccggccggaccacg 105978 Score = 190 bits (96), Expect = 7e-45 Identities = 144/160 (90%) Strand = Plus / Plus Query: 79 cctcccccgctccaaaccctagccaccaccagccgctcctccgggcagccaagtccacgg 138 |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||| |||| Sbjct: 105302 cctccctcgctccaaaccctagccgccgccagccactcctccggccgggcaagtcgacgg 105361 Query: 139 ccttcaagcgcgaggagcgccgcaagcacaaggagcgcaagcggcaggaccgcctcgccc 198 ||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| Sbjct: 105362 ccttcaagcgcgaggagcgccgcaagcgcaaggagcgaaagcagcaggagcgcctcgccc 105421 Query: 199 tcgagctagcgcggtgggagcccctcggcgcaccgccccg 238 |||| || | ||||||||||||||||||||| |||||||| Sbjct: 105422 tcgatctcgagcggtgggagcccctcggcgccccgccccg 105461 >dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 383 bits (193), Expect = e-102 Identities = 315/355 (88%), Gaps = 3/355 (0%) Strand = Plus / Plus Query: 398 cccgcaggccgccgctgtgagggcgtgccgcgcgttcttcggggagcacgtggacgacga 457 ||||||||||||||| ||| ||| |||||||| |||||||| |||||||| ||| |||| Sbjct: 16273 cccgcaggccgccgccgtggaggcttgccgcgccttcttcggtgagcacgtcgaccacga 16332 Query: 458 cgacgacggcgacgaggaggagga---ggagcaaggcagtgttgcccggttcttcgagga 514 ||||| || ||||||||| ||||| |||| |||||| ||| |||||||||||| |||| Sbjct: 16333 cgacggcgacgacgaggatgaggaagaggaggaaggcaatgtggcccggttcttccagga 16392 Query: 515 gctgctggagaaagacgcgggcctgagggggttgtacgaggcggagcgggagagggggcg 574 ||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||| || Sbjct: 16393 gctactggagaaggacgcgggcctgagggggttctacgaggcggagcgggagaagggccg 16452 Query: 575 gttcctgtgcctggtgtgcgaggggatcagcgctagggcgggcaagaggttcgccggctg 634 |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||| Sbjct: 16453 gttcctgtgcctcgtgtgcgaggggatcggcgccagggcgggcaagaggttcgccggctg 16512 Query: 635 cgccgcgctcgtgcagcacgccgggtcggttgcccggaccaaggggaggcttgcgcaccg 694 ||| |||||||||||||||||||| ||||| |||||| || | ||||| | |||||||| Sbjct: 16513 cgcggcgctcgtgcagcacgccggatcggtcgcccgggccgggaggaggatggcgcaccg 16572 Query: 695 cgcgttcgcagacgccgtcggccggctgctcggctggggcgcgggccggaccacg 749 |||||||| |||||||||||||||||||| |||||| |||| |||||||||||| Sbjct: 16573 ggcgttcgcggacgccgtcggccggctgctgggctggagcgccggccggaccacg 16627 Score = 190 bits (96), Expect = 7e-45 Identities = 144/160 (90%) Strand = Plus / Plus Query: 79 cctcccccgctccaaaccctagccaccaccagccgctcctccgggcagccaagtccacgg 138 |||||| ||||||||||||||||| || |||||| ||||||||| | | |||||| |||| Sbjct: 15951 cctccctcgctccaaaccctagccgccgccagccactcctccggccgggcaagtcgacgg 16010 Query: 139 ccttcaagcgcgaggagcgccgcaagcacaaggagcgcaagcggcaggaccgcctcgccc 198 ||||||||||||||||||||||||||| ||||||||| |||| |||||| |||||||||| Sbjct: 16011 ccttcaagcgcgaggagcgccgcaagcgcaaggagcgaaagcagcaggagcgcctcgccc 16070 Query: 199 tcgagctagcgcggtgggagcccctcggcgcaccgccccg 238 |||| || | ||||||||||||||||||||| |||||||| Sbjct: 16071 tcgatctcgagcggtgggagcccctcggcgccccgccccg 16110