BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem126p10 (1097 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT836261.1| Oryza sativa (indica cultivar-group) cDNA clone:... 601 e-168 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127 dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127 dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic D... 464 e-127 emb|CT836332.1| Oryza sativa (indica cultivar-group) cDNA clone:... 309 1e-80 >emb|CT836261.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116O20, full insert sequence Length = 1167 Score = 601 bits (303), Expect = e-168 Identities = 390/419 (93%) Strand = Plus / Plus Query: 275 cgtcgtcccccgtcttcctcaacgtctacgacgtcacccccgccaacggctacgcccgct 334 |||||||||| || | ||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 363 cgtcgtccccggtgtacctcaacgtgtacgacgtcacccccgccaacggctacgcgcgct 422 Query: 335 ggctcggcctcggcgtctaccactccggcgtccaggtccacggggtggagtacgcgtacg 394 |||||||||||||||||||||||||||||||||| || || ||||||||||||||||||| Sbjct: 423 ggctcggcctcggcgtctaccactccggcgtccaagttcatggggtggagtacgcgtacg 482 Query: 395 gggcgcacgagggggcggggagcgggatcttcgaggtgtcgccgcggcggtgccccgggt 454 |||||||||| ||||||||||||||||||||||||||| ||||| || ||||||| |||| Sbjct: 483 gggcgcacgacggggcggggagcgggatcttcgaggtggcgccgaggaggtgcccggggt 542 Query: 455 acaccttccgggaggcggtgctggtggggaccacggagctgacgcgggccgaggtgcgcg 514 || |||||||||||||| | ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 543 acgccttccgggaggcgatcctggtggggacgacggagctgacgcgcgccgaggtgcgcg 602 Query: 515 cgctcatggccgagctcgccgcggacttccccggcgacacgtacaaccttgtctcccgca 574 || ||||||| || |||||||||||||||||||||||| | |||||||| |||||||||| Sbjct: 603 cggtcatggcggacctcgccgcggacttccccggcgacgcctacaacctcgtctcccgca 662 Query: 575 actgcaaccacttctgcgacgccgcgtgccgccgcctagtccgcgcgcgcatcccgcgct 634 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 663 actgcaaccacttctgcgacgccgcgtgccgccgcctcgtccgcgcccgcatcccgcgct 722 Query: 635 gggtcaaccgcctcgctaagattggcgtcgtcttcacctgcgtcatcccgggcaacggc 693 |||||||||||||||| ||||| || ||||||||||||||||||||||||||||||||| Sbjct: 723 gggtcaaccgcctcgccaagatcggggtcgtcttcacctgcgtcatcccgggcaacggc 781 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 726 cggcgggaaggccggcatcaggagccgctccgcgcgccaggaggccgaggcttccgcgcc 785 ||||||||||||| ||||| | ||||||||||| ||||||| || || || ||||||| Sbjct: 829 cggcgggaaggccagcatccgcagccgctccgctcgccagggcgcggacgccgccgcgcc 888 Query: 786 gccgcggccgaggaccttcttccgctccctctccgtcggcggc 828 ||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 889 gccgcggcccaagacgttcttccgctccctctccgtcggcggc 931 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 464 bits (234), Expect = e-127 Identities = 297/318 (93%) Strand = Plus / Minus Query: 376 ggggtggagtacgcgtacggggcgcacgagggggcggggagcgggatcttcgaggtgtcg 435 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 4073830 ggggtggagtacgcgtacggggcgcacgacggggcggggagcgggatcttcgaggtggcg 4073771 Query: 436 ccgcggcggtgccccgggtacaccttccgggaggcggtgctggtggggaccacggagctg 495 ||| || ||||||| |||||| |||||||||||||| | ||||||||||| ||||||||| Sbjct: 4073770 ccgaggaggtgcccggggtacgccttccgggaggcgatcctggtggggacgacggagctg 4073711 Query: 496 acgcgggccgaggtgcgcgcgctcatggccgagctcgccgcggacttccccggcgacacg 555 ||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||| | Sbjct: 4073710 acgcgcgccgaggtgcgcgcggtcatggcggacctcgccgcggacttccccggcgacgcc 4073651 Query: 556 tacaaccttgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctagtc 615 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4073650 tacaacctcgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctcgtc 4073591 Query: 616 cgcgcgcgcatcccgcgctgggtcaaccgcctcgctaagattggcgtcgtcttcacctgc 675 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 4073590 cgcgcccgcatcccgcgctgggtcaaccgcctcgccaagatcggggtcgtcttcacctgc 4073531 Query: 676 gtcatcccgggcaacggc 693 |||||||||||||||||| Sbjct: 4073530 gtcatcccgggcaacggc 4073513 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Minus Query: 275 cgtcgtcccccgtcttcctcaacgtctacgacgtcacccccgccaacggctacgcccgct 334 |||||||||| || | ||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 4074021 cgtcgtccccggtgtacctcaacgtgtacgacgtcacccccgccaacggctacgcgcgct 4073962 Query: 335 ggctcggcctcggcgtctaccactccggcgtcca 368 |||||||||||||||||||||||||||||||||| Sbjct: 4073961 ggctcggcctcggcgtctaccactccggcgtcca 4073928 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 726 cggcgggaaggccggcatcaggagccgctccgcgcgccaggaggccgaggcttccgcgcc 785 ||||||||||||| ||||| | ||||||||||| ||||||| || || || ||||||| Sbjct: 4073465 cggcgggaaggccagcatccgcagccgctccgctcgccagggcgcggacgccgccgcgcc 4073406 Query: 786 gccgcggccgaggaccttcttccgctccctctccgtcggcggc 828 ||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 4073405 gccgcggcccaagacgttcttccgctccctctccgtcggcggc 4073363 >dbj|AP007257.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0019L07 Length = 131650 Score = 464 bits (234), Expect = e-127 Identities = 297/318 (93%) Strand = Plus / Minus Query: 376 ggggtggagtacgcgtacggggcgcacgagggggcggggagcgggatcttcgaggtgtcg 435 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 117483 ggggtggagtacgcgtacggggcgcacgacggggcggggagcgggatcttcgaggtggcg 117424 Query: 436 ccgcggcggtgccccgggtacaccttccgggaggcggtgctggtggggaccacggagctg 495 ||| || ||||||| |||||| |||||||||||||| | ||||||||||| ||||||||| Sbjct: 117423 ccgaggaggtgcccggggtacgccttccgggaggcgatcctggtggggacgacggagctg 117364 Query: 496 acgcgggccgaggtgcgcgcgctcatggccgagctcgccgcggacttccccggcgacacg 555 ||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||| | Sbjct: 117363 acgcgcgccgaggtgcgcgcggtcatggcggacctcgccgcggacttccccggcgacgcc 117304 Query: 556 tacaaccttgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctagtc 615 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117303 tacaacctcgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctcgtc 117244 Query: 616 cgcgcgcgcatcccgcgctgggtcaaccgcctcgctaagattggcgtcgtcttcacctgc 675 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 117243 cgcgcccgcatcccgcgctgggtcaaccgcctcgccaagatcggggtcgtcttcacctgc 117184 Query: 676 gtcatcccgggcaacggc 693 |||||||||||||||||| Sbjct: 117183 gtcatcccgggcaacggc 117166 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Minus Query: 275 cgtcgtcccccgtcttcctcaacgtctacgacgtcacccccgccaacggctacgcccgct 334 |||||||||| || | ||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 117674 cgtcgtccccggtgtacctcaacgtgtacgacgtcacccccgccaacggctacgcgcgct 117615 Query: 335 ggctcggcctcggcgtctaccactccggcgtcca 368 |||||||||||||||||||||||||||||||||| Sbjct: 117614 ggctcggcctcggcgtctaccactccggcgtcca 117581 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 726 cggcgggaaggccggcatcaggagccgctccgcgcgccaggaggccgaggcttccgcgcc 785 ||||||||||||| ||||| | ||||||||||| ||||||| || || || ||||||| Sbjct: 117118 cggcgggaaggccagcatccgcagccgctccgctcgccagggcgcggacgccgccgcgcc 117059 Query: 786 gccgcggccgaggaccttcttccgctccctctccgtcggcggc 828 ||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 117058 gccgcggcccaagacgttcttccgctccctctccgtcggcggc 117016 >dbj|AP007226.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0036B04 Length = 136159 Score = 464 bits (234), Expect = e-127 Identities = 297/318 (93%) Strand = Plus / Minus Query: 376 ggggtggagtacgcgtacggggcgcacgagggggcggggagcgggatcttcgaggtgtcg 435 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 7089 ggggtggagtacgcgtacggggcgcacgacggggcggggagcgggatcttcgaggtggcg 7030 Query: 436 ccgcggcggtgccccgggtacaccttccgggaggcggtgctggtggggaccacggagctg 495 ||| || ||||||| |||||| |||||||||||||| | ||||||||||| ||||||||| Sbjct: 7029 ccgaggaggtgcccggggtacgccttccgggaggcgatcctggtggggacgacggagctg 6970 Query: 496 acgcgggccgaggtgcgcgcgctcatggccgagctcgccgcggacttccccggcgacacg 555 ||||| ||||||||||||||| ||||||| || |||||||||||||||||||||||| | Sbjct: 6969 acgcgcgccgaggtgcgcgcggtcatggcggacctcgccgcggacttccccggcgacgcc 6910 Query: 556 tacaaccttgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctagtc 615 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 6909 tacaacctcgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgcctcgtc 6850 Query: 616 cgcgcgcgcatcccgcgctgggtcaaccgcctcgctaagattggcgtcgtcttcacctgc 675 ||||| ||||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 6849 cgcgcccgcatcccgcgctgggtcaaccgcctcgccaagatcggggtcgtcttcacctgc 6790 Query: 676 gtcatcccgggcaacggc 693 |||||||||||||||||| Sbjct: 6789 gtcatcccgggcaacggc 6772 Score = 147 bits (74), Expect = 1e-31 Identities = 89/94 (94%) Strand = Plus / Minus Query: 275 cgtcgtcccccgtcttcctcaacgtctacgacgtcacccccgccaacggctacgcccgct 334 |||||||||| || | ||||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 7280 cgtcgtccccggtgtacctcaacgtgtacgacgtcacccccgccaacggctacgcgcgct 7221 Query: 335 ggctcggcctcggcgtctaccactccggcgtcca 368 |||||||||||||||||||||||||||||||||| Sbjct: 7220 ggctcggcctcggcgtctaccactccggcgtcca 7187 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Minus Query: 726 cggcgggaaggccggcatcaggagccgctccgcgcgccaggaggccgaggcttccgcgcc 785 ||||||||||||| ||||| | ||||||||||| ||||||| || || || ||||||| Sbjct: 6724 cggcgggaaggccagcatccgcagccgctccgctcgccagggcgcggacgccgccgcgcc 6665 Query: 786 gccgcggccgaggaccttcttccgctccctctccgtcggcggc 828 ||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 6664 gccgcggcccaagacgttcttccgctccctctccgtcggcggc 6622 >emb|CT836332.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN080O24, full insert sequence Length = 545 Score = 309 bits (156), Expect = 1e-80 Identities = 192/204 (94%) Strand = Plus / Plus Query: 490 gagctgacgcgggccgaggtgcgcgcgctcatggccgagctcgccgcggacttccccggc 549 ||||||||||| ||||||||||||||| ||||||| || ||||||||||||||||||||| Sbjct: 1 gagctgacgcgcgccgaggtgcgcgcggtcatggcggacctcgccgcggacttccccggc 60 Query: 550 gacacgtacaaccttgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgc 609 ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacgcctacaacctcgtctcccgcaactgcaaccacttctgcgacgccgcgtgccgccgc 120 Query: 610 ctagtccgcgcgcgcatcccgcgctgggtcaaccgcctcgctaagattggcgtcgtcttc 669 || |||||||| ||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 121 ctcgtccgcgcccgcatcccgcgctgggtcaaccgcctcgccaagatcggggtcgtcttc 180 Query: 670 acctgcgtcatcccgggcaacggc 693 |||||||||||||||||||||||| Sbjct: 181 acctgcgtcatcccgggcaacggc 204 Score = 101 bits (51), Expect = 6e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 726 cggcgggaaggccggcatcaggagccgctccgcgcgccaggaggccgaggcttccgcgcc 785 ||||||||||||| ||||| | ||||||||||| ||||||| || || || ||||||| Sbjct: 252 cggcgggaaggccagcatccgcagccgctccgctcgccagggcgcggacgccgccgcgcc 311 Query: 786 gccgcggccgaggaccttcttccgctccctctccgtcggcggc 828 ||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 312 gccgcggcccaagacgttcttccgctccctctccgtcggcggc 354