BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem126m20 (1018 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome... 335 2e-88 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 335 2e-88 >gb|AC108872.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0079P23, complete sequence Length = 125090 Score = 335 bits (169), Expect = 2e-88 Identities = 235/257 (91%) Strand = Plus / Plus Query: 509 cgtcatcctcatctccgacggcgacgaccgcaccatcttccgggagaccatccaccccaa 568 |||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 28921 cgtcgtcctcatctccgacggcgacgaccgcaccatcttccgcgaggccatcaaccccag 28980 Query: 569 gtacccagtccacgccttcggcttccgcgacgcgcacgacgcgagggccttgcactacgt 628 |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 28981 gtaccccgtccacgccttcggcttccgcggcgcgcacgacgcgagggccgtgcaccacgt 29040 Query: 629 cgccgaccacacctccggcgtctacgccgtcctcaacgacgagcacgaccggatcaccga 688 ||||||||||||||||||||| |||| ||||||| |||||||||||||| || ||||||| Sbjct: 29041 cgccgaccacacctccggcgtgtacggcgtcctcgacgacgagcacgacagggtcaccga 29100 Query: 689 cgccttcgcggcctgcgtccgccgcgtcacgtccgtcgtagcgctcgaggcgcagatcga 748 ||| |||||||| ||||||||||||||||| |||||||| || |||| |||||| |||| Sbjct: 29101 cgcgttcgcggcgtgcgtccgccgcgtcacctccgtcgtcgccgtcgacgcgcaggtcga 29160 Query: 749 cctcacctgcggcgcct 765 ||||||||||||||||| Sbjct: 29161 cctcacctgcggcgcct 29177 Score = 234 bits (118), Expect = 6e-58 Identities = 333/406 (82%), Gaps = 9/406 (2%) Strand = Plus / Plus Query: 61 acaaggtgcagctgagcaccttcgcgagggtcgacgtcatcccacggcgggacagccacg 120 ||||||| ||||||||||| ||| ||||||| |||| ||||| || ||||| ||||| Sbjct: 28479 acaaggtacagctgagcactttcccgagggtggacgcgatcccccgtcgggaatgccacc 28538 Query: 121 cccgcctcccggtgctggtgcgcatcgcggtgccggcggcggcggcgacgacggagcggc 180 | || |||||||||||||||||| |||| |||||| |||||| ||| ||| | Sbjct: 28539 cgcgtctcccggtgctggtgcgcgtcgccgtgccg---------gcgacggcggcgcgcc 28589 Query: 181 gcgcccccgtcgacctcgtcacgctgctcgacatcagctacggtggcggcggcgccgcgg 240 | || || || ||||||||||| |||||||||||||||| ||| |||||||||| |||| Sbjct: 28590 gtgcaccggttgacctcgtcaccctgctcgacatcagctgcggcggcggcggcggcgcgc 28649 Query: 241 cgtcgaagaggctggatctgctcaggaaggccatggatctcgtcatcgggaggctcggcg 300 || ||| ||||||||| ||||| |||||||| ||||| |||||||| || | ||||||| Sbjct: 28650 cggcgaggaggctggacctgctgaggaaggcgatggacctcgtcattggaaacctcggcg 28709 Query: 301 cggaggaccgcctcgccatcgtgccgttccactcgtccgtcaccgaccccaccggcctcc 360 | || ||||||||||||||||||||||||||||| |||||| |||| |||||||||| | Sbjct: 28710 ccgacgaccgcctcgccatcgtgccgttccactcctccgtcgtcgacgccaccggccttc 28769 Query: 361 tgcatatgtccgtcgagggccggtgcgccgccagcaggaaggtgcagtcgctggcggtaa 420 | | |||||||||||||| ||| ||| ||| ||| ||||||||||||||||||| || Sbjct: 28770 tcgagatgtccgtcgagggacggggcgtcgcgagccggaaggtgcagtcgctggccgtcg 28829 Query: 421 gcgggggaaccaagctcttcccggccctgaacatggccgtccagat 466 ||| || |||||||| |||||||| ||||| ||||||| |||| Sbjct: 28830 ccggcggcaccaagctgttcccggcgttgaacgcggccgtcgagat 28875 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 335 bits (169), Expect = 2e-88 Identities = 235/257 (91%) Strand = Plus / Plus Query: 509 cgtcatcctcatctccgacggcgacgaccgcaccatcttccgggagaccatccaccccaa 568 |||| ||||||||||||||||||||||||||||||||||||| ||| ||||| |||||| Sbjct: 25090457 cgtcgtcctcatctccgacggcgacgaccgcaccatcttccgcgaggccatcaaccccag 25090516 Query: 569 gtacccagtccacgccttcggcttccgcgacgcgcacgacgcgagggccttgcactacgt 628 |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 25090517 gtaccccgtccacgccttcggcttccgcggcgcgcacgacgcgagggccgtgcaccacgt 25090576 Query: 629 cgccgaccacacctccggcgtctacgccgtcctcaacgacgagcacgaccggatcaccga 688 ||||||||||||||||||||| |||| ||||||| |||||||||||||| || ||||||| Sbjct: 25090577 cgccgaccacacctccggcgtgtacggcgtcctcgacgacgagcacgacagggtcaccga 25090636 Query: 689 cgccttcgcggcctgcgtccgccgcgtcacgtccgtcgtagcgctcgaggcgcagatcga 748 ||| |||||||| ||||||||||||||||| |||||||| || |||| |||||| |||| Sbjct: 25090637 cgcgttcgcggcgtgcgtccgccgcgtcacctccgtcgtcgccgtcgacgcgcaggtcga 25090696 Query: 749 cctcacctgcggcgcct 765 ||||||||||||||||| Sbjct: 25090697 cctcacctgcggcgcct 25090713 Score = 234 bits (118), Expect = 6e-58 Identities = 333/406 (82%), Gaps = 9/406 (2%) Strand = Plus / Plus Query: 61 acaaggtgcagctgagcaccttcgcgagggtcgacgtcatcccacggcgggacagccacg 120 ||||||| ||||||||||| ||| ||||||| |||| ||||| || ||||| ||||| Sbjct: 25090015 acaaggtacagctgagcactttcccgagggtggacgcgatcccccgtcgggaatgccacc 25090074 Query: 121 cccgcctcccggtgctggtgcgcatcgcggtgccggcggcggcggcgacgacggagcggc 180 | || |||||||||||||||||| |||| |||||| |||||| ||| ||| | Sbjct: 25090075 cgcgtctcccggtgctggtgcgcgtcgccgtgccg---------gcgacggcggcgcgcc 25090125 Query: 181 gcgcccccgtcgacctcgtcacgctgctcgacatcagctacggtggcggcggcgccgcgg 240 | || || || ||||||||||| |||||||||||||||| ||| |||||||||| |||| Sbjct: 25090126 gtgcaccggttgacctcgtcaccctgctcgacatcagctgcggcggcggcggcggcgcgc 25090185 Query: 241 cgtcgaagaggctggatctgctcaggaaggccatggatctcgtcatcgggaggctcggcg 300 || ||| ||||||||| ||||| |||||||| ||||| |||||||| || | ||||||| Sbjct: 25090186 cggcgaggaggctggacctgctgaggaaggcgatggacctcgtcattggaaacctcggcg 25090245 Query: 301 cggaggaccgcctcgccatcgtgccgttccactcgtccgtcaccgaccccaccggcctcc 360 | || ||||||||||||||||||||||||||||| |||||| |||| |||||||||| | Sbjct: 25090246 ccgacgaccgcctcgccatcgtgccgttccactcctccgtcgtcgacgccaccggccttc 25090305 Query: 361 tgcatatgtccgtcgagggccggtgcgccgccagcaggaaggtgcagtcgctggcggtaa 420 | | |||||||||||||| ||| ||| ||| ||| ||||||||||||||||||| || Sbjct: 25090306 tcgagatgtccgtcgagggacggggcgtcgcgagccggaaggtgcagtcgctggccgtcg 25090365 Query: 421 gcgggggaaccaagctcttcccggccctgaacatggccgtccagat 466 ||| || |||||||| |||||||| ||||| ||||||| |||| Sbjct: 25090366 ccggcggcaccaagctgttcccggcgttgaacgcggccgtcgagat 25090411