BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem126h11
         (1111 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   202   2e-48
dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D...   202   2e-48
ref|NM_001053492.1| Oryza sativa (japonica cultivar-group) Os02g...   196   1e-46

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  202 bits (102), Expect = 2e-48
 Identities = 204/238 (85%)
 Strand = Plus / Minus

                                                                            
Query: 679      cagcagcagccggagctcctccatctcgtcgacgctctcgtccttctccccgaccgacga 738
                ||||||||||||| ||||| || | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 18739513 cagcagcagccggggctccgccgtgtcgtccacgctctcgtcgttctcccccaccgacga 18739454

                                                                            
Query: 739      ttccgcctccggcggcaacggcgccggcatgggcggcggcaacgccggccacgtgctcgt 798
                 || |||||||||| |  | ||| |  |   | ||||| ||||| || |||||| |||||
Sbjct: 18739453 gtcggcctccggcgccggcagcggctacgccgtcggcgacaacggcgcccacgtcctcgt 18739394

                                                                            
Query: 799      cgcggccgggtgccgggcgtgcttcatgtacttcatggtgcccaagcgcgccgacgtgtg 858
                ||| ||||| |||||||| ||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 18739393 cgccgccggctgccgggcttgcttcatgtacttcatggtgccgaagaccgccgacgtgtg 18739334

                                                                          
Query: 859      ccctaagtgcggcagctccggcctcctccacctcagccacaacggctttgtctgagcc 916
                ||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||||
Sbjct: 18739333 ccccaagtgcggcagctccggcctcctccacctcagccgcaacggctacgtctgagcc 18739276



 Score =  155 bits (78), Expect = 5e-34
 Identities = 87/90 (96%)
 Strand = Plus / Minus

                                                                            
Query: 329      gagggcagcgacgacagcgagggagtcaccgtcgagctcaactccgaggtcgccctgccc 388
                ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 18741560 gaggggagcgacgacagcgagggggtcaccgtcgagctcaactccgaggtcgccctgccc 18741501

                                              
Query: 389      tacaactgggagcagtgcctcgacatccgg 418
                ||| ||||||||||||||||||||||||||
Sbjct: 18741500 taccactgggagcagtgcctcgacatccgg 18741471



 Score =  111 bits (56), Expect = 6e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                            
Query: 418      gacggggcaagtgtactacatcaactgggaggacggcacccggacgaccgtcgacccgcg 477
                |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 18739903 gacggggcaagtttactacatcaactgggaggacggcacccggacgaccatcgatccgcg 18739844

                            
Query: 478      cacgtcgtcggc 489
                | ||||||||||
Sbjct: 18739843 ctcgtcgtcggc 18739832



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                            
Query: 220      cttgatgactgctcccaacatcgagatgatcgcctcctcgctgcgcaactgctccctcag 279
                |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 18741675 cttgatgactgccccgaacatcgagatgatcgcctcgtcgctgcgcaactgctccctcaa 18741616

                      
Query: 280      cggcgg 285
                ||||||
Sbjct: 18741615 cggcgg 18741610


>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0071O21
          Length = 158410

 Score =  202 bits (102), Expect = 2e-48
 Identities = 204/238 (85%)
 Strand = Plus / Minus

                                                                         
Query: 679   cagcagcagccggagctcctccatctcgtcgacgctctcgtccttctccccgaccgacga 738
             ||||||||||||| ||||| || | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 82155 cagcagcagccggggctccgccgtgtcgtccacgctctcgtcgttctcccccaccgacga 82096

                                                                         
Query: 739   ttccgcctccggcggcaacggcgccggcatgggcggcggcaacgccggccacgtgctcgt 798
              || |||||||||| |  | ||| |  |   | ||||| ||||| || |||||| |||||
Sbjct: 82095 gtcggcctccggcgccggcagcggctacgccgtcggcgacaacggcgcccacgtcctcgt 82036

                                                                         
Query: 799   cgcggccgggtgccgggcgtgcttcatgtacttcatggtgcccaagcgcgccgacgtgtg 858
             ||| ||||| |||||||| ||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 82035 cgccgccggctgccgggcttgcttcatgtacttcatggtgccgaagaccgccgacgtgtg 81976

                                                                       
Query: 859   ccctaagtgcggcagctccggcctcctccacctcagccacaacggctttgtctgagcc 916
             ||| |||||||||||||||||||||||||||||||||| ||||||||  |||||||||
Sbjct: 81975 ccccaagtgcggcagctccggcctcctccacctcagccgcaacggctacgtctgagcc 81918



 Score =  155 bits (78), Expect = 5e-34
 Identities = 87/90 (96%)
 Strand = Plus / Minus

                                                                         
Query: 329   gagggcagcgacgacagcgagggagtcaccgtcgagctcaactccgaggtcgccctgccc 388
             ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 84202 gaggggagcgacgacagcgagggggtcaccgtcgagctcaactccgaggtcgccctgccc 84143

                                           
Query: 389   tacaactgggagcagtgcctcgacatccgg 418
             ||| ||||||||||||||||||||||||||
Sbjct: 84142 taccactgggagcagtgcctcgacatccgg 84113



 Score =  111 bits (56), Expect = 6e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                         
Query: 418   gacggggcaagtgtactacatcaactgggaggacggcacccggacgaccgtcgacccgcg 477
             |||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 82545 gacggggcaagtttactacatcaactgggaggacggcacccggacgaccatcgatccgcg 82486

                         
Query: 478   cacgtcgtcggc 489
             | ||||||||||
Sbjct: 82485 ctcgtcgtcggc 82474



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 62/66 (93%)
 Strand = Plus / Minus

                                                                         
Query: 220   cttgatgactgctcccaacatcgagatgatcgcctcctcgctgcgcaactgctccctcag 279
             |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 84317 cttgatgactgccccgaacatcgagatgatcgcctcgtcgctgcgcaactgctccctcaa 84258

                   
Query: 280   cggcgg 285
             ||||||
Sbjct: 84257 cggcgg 84252


>ref|NM_001053492.1| Oryza sativa (japonica cultivar-group) Os02g0516400 (Os02g0516400)
            mRNA, complete cds
          Length = 1227

 Score =  196 bits (99), Expect = 1e-46
 Identities = 195/227 (85%)
 Strand = Plus / Plus

                                                                        
Query: 679  cagcagcagccggagctcctccatctcgtcgacgctctcgtccttctccccgaccgacga 738
            ||||||||||||| ||||| || | ||||| ||||||||||| |||||||| ||||||||
Sbjct: 993  cagcagcagccggggctccgccgtgtcgtccacgctctcgtcgttctcccccaccgacga 1052

                                                                        
Query: 739  ttccgcctccggcggcaacggcgccggcatgggcggcggcaacgccggccacgtgctcgt 798
             || |||||||||| |  | ||| |  |   | ||||| ||||| || |||||| |||||
Sbjct: 1053 gtcggcctccggcgccggcagcggctacgccgtcggcgacaacggcgcccacgtcctcgt 1112

                                                                        
Query: 799  cgcggccgggtgccgggcgtgcttcatgtacttcatggtgcccaagcgcgccgacgtgtg 858
            ||| ||||| |||||||| ||||||||||||||||||||||| |||  ||||||||||||
Sbjct: 1113 cgccgccggctgccgggcttgcttcatgtacttcatggtgccgaagaccgccgacgtgtg 1172

                                                           
Query: 859  ccctaagtgcggcagctccggcctcctccacctcagccacaacggct 905
            ||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1173 ccccaagtgcggcagctccggcctcctccacctcagccgcaacggct 1219



 Score =  155 bits (78), Expect = 5e-34
 Identities = 87/90 (96%)
 Strand = Plus / Plus

                                                                       
Query: 329 gagggcagcgacgacagcgagggagtcaccgtcgagctcaactccgaggtcgccctgccc 388
           ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaggggagcgacgacagcgagggggtcaccgtcgagctcaactccgaggtcgccctgccc 501

                                         
Query: 389 tacaactgggagcagtgcctcgacatccgg 418
           ||| ||||||||||||||||||||||||||
Sbjct: 502 taccactgggagcagtgcctcgacatccgg 531



 Score =  109 bits (55), Expect = 2e-20
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                       
Query: 419 acggggcaagtgtactacatcaactgggaggacggcacccggacgaccgtcgacccgcgc 478
           ||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 604 acggggcaagtttactacatcaactgggaggacggcacccggacgaccatcgatccgcgc 663

                      
Query: 479 acgtcgtcggc 489
            ||||||||||
Sbjct: 664 tcgtcgtcggc 674



 Score = 99.6 bits (50), Expect = 2e-17
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                       
Query: 220 cttgatgactgctcccaacatcgagatgatcgcctcctcgctgcgcaactgctccctcag 279
           |||||||||||| || |||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 327 cttgatgactgccccgaacatcgagatgatcgcctcgtcgctgcgcaactgctccctcaa 386

                 
Query: 280 cggcgg 285
           ||||||
Sbjct: 387 cggcgg 392