BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem126f02 (1030 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066905.1| Oryza sativa (japonica cultivar-group) Os07g... 222 2e-54 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-35 dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 159 3e-35 >ref|NM_001066905.1| Oryza sativa (japonica cultivar-group) Os07g0633000 (Os07g0633000) mRNA, complete cds Length = 1251 Score = 222 bits (112), Expect = 2e-54 Identities = 246/290 (84%), Gaps = 3/290 (1%) Strand = Plus / Plus Query: 458 acggagtgggagctgagggggctggacagcggctacacgcccacgagcttcgacctcggc 517 ||||||||||||||| | |||||||| ||| |||| |||| ||||||||||||||||| Sbjct: 565 acggagtgggagctgcgtgggctggagcgcgactacgcgccggcgagcttcgacctcggc 624 Query: 518 gtgcgcgggtcgctgtacgcggacagaggccgcggccgc---gcgtgccggctgaagggc 574 || ||||||||||| ||||| ||||| ||||||||||| || |||||||||| |||| Sbjct: 625 gtccgcgggtcgctctacgccgacaggagccgcggccgccgcgcctgccggctgaggggc 684 Query: 575 cacctcgagatcgccatcagcttcgtcctgccgccgcccctgcggcttgtgccggagggc 634 |||||||||||| ||||| ||| ||||||||||||||| |||| || ||||||| | | Sbjct: 685 cacctcgagatctccatcggctgcgtcctgccgccgccgatgcgcctcgtgccgggcgcc 744 Query: 635 atcctgcgaggcgtcgccgagtcggttctgtctaggctggccgagaagatgaagcgggac 694 || |||| ||||||||||||||||| ||| || ||||||||||||||||||| |||| Sbjct: 745 gtcatgcgcggcgtcgccgagtcggtgctgcagagactggccgagaagatgaagcaggac 804 Query: 695 gtggacgtcggcctcctcgccgacttcaagaggtttcgacgggagaaggc 744 || ||||||||| || ||||||||||| |||| || || ||||||||||| Sbjct: 805 gtcgacgtcggcatcgtcgccgacttccagagattccggcgggagaaggc 854 Score = 147 bits (74), Expect = 1e-31 Identities = 95/102 (93%) Strand = Plus / Plus Query: 353 gagtggaggatccagatgctgccgctgcagttcctcctcctcaccgtgcaccccgtcgtc 412 |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 391 gagtggagagtccagatgctgccgctgcagttcctcctcctcaccgtgcacccggtcgtc 450 Query: 413 gtgatgcagctgcggcaccgcggcggcgtgctcgagctccga 454 || ||||||||||| ||||||| |||||||||||| |||||| Sbjct: 451 gtcatgcagctgcgccaccgcgacggcgtgctcgacctccga 492 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 159 bits (80), Expect = 3e-35 Identities = 175/206 (84%), Gaps = 3/206 (1%) Strand = Plus / Plus Query: 458 acggagtgggagctgagggggctggacagcggctacacgcccacgagcttcgacctcggc 517 ||||||||||||||| | |||||||| ||| |||| |||| ||||||||||||||||| Sbjct: 26203777 acggagtgggagctgcgtgggctggagcgcgactacgcgccggcgagcttcgacctcggc 26203836 Query: 518 gtgcgcgggtcgctgtacgcggacagaggccgcggccgc---gcgtgccggctgaagggc 574 || ||||||||||| ||||| ||||| ||||||||||| || |||||||||| |||| Sbjct: 26203837 gtccgcgggtcgctctacgccgacaggagccgcggccgccgcgcctgccggctgaggggc 26203896 Query: 575 cacctcgagatcgccatcagcttcgtcctgccgccgcccctgcggcttgtgccggagggc 634 |||||||||||| ||||| ||| ||||||||||||||| |||| || ||||||| | | Sbjct: 26203897 cacctcgagatctccatcggctgcgtcctgccgccgccgatgcgcctcgtgccgggcgcc 26203956 Query: 635 atcctgcgaggcgtcgccgagtcggt 660 || |||| ||||||||||||||||| Sbjct: 26203957 gtcatgcgcggcgtcgccgagtcggt 26203982 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Plus Query: 346 gcaggaagagtggaggatccagatgctgccgctgcagttcctcctcctcaccgtgcaccc 405 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26203537 gcaggaggagtggagagtccagatgctgccgctgcagttcctcctcctcaccgtgcaccc 26203596 Query: 406 cgtcgtcgtgatgcagctgcggcaccgcggcggcgtgctcgagctccga 454 |||||||| ||||||||||| ||||||| |||||||||||| |||||| Sbjct: 26203597 ggtcgtcgtcatgcagctgcgccaccgcgacggcgtgctcgacctccga 26203645 Score = 83.8 bits (42), Expect = 1e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 671 ctggccgagaagatgaagcgggacgtggacgtcggcctcctcgccgacttcaagaggttt 730 ||||||||||||||||||| |||||| ||||||||| || ||||||||||| |||| || Sbjct: 26205254 ctggccgagaagatgaagcaggacgtcgacgtcggcatcgtcgccgacttccagagattc 26205313 Query: 731 cgacgggagaaggc 744 || ||||||||||| Sbjct: 26205314 cggcgggagaaggc 26205327 >dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 159 bits (80), Expect = 3e-35 Identities = 175/206 (84%), Gaps = 3/206 (1%) Strand = Plus / Plus Query: 458 acggagtgggagctgagggggctggacagcggctacacgcccacgagcttcgacctcggc 517 ||||||||||||||| | |||||||| ||| |||| |||| ||||||||||||||||| Sbjct: 95635 acggagtgggagctgcgtgggctggagcgcgactacgcgccggcgagcttcgacctcggc 95694 Query: 518 gtgcgcgggtcgctgtacgcggacagaggccgcggccgc---gcgtgccggctgaagggc 574 || ||||||||||| ||||| ||||| ||||||||||| || |||||||||| |||| Sbjct: 95695 gtccgcgggtcgctctacgccgacaggagccgcggccgccgcgcctgccggctgaggggc 95754 Query: 575 cacctcgagatcgccatcagcttcgtcctgccgccgcccctgcggcttgtgccggagggc 634 |||||||||||| ||||| ||| ||||||||||||||| |||| || ||||||| | | Sbjct: 95755 cacctcgagatctccatcggctgcgtcctgccgccgccgatgcgcctcgtgccgggcgcc 95814 Query: 635 atcctgcgaggcgtcgccgagtcggt 660 || |||| ||||||||||||||||| Sbjct: 95815 gtcatgcgcggcgtcgccgagtcggt 95840 Score = 153 bits (77), Expect = 2e-33 Identities = 101/109 (92%) Strand = Plus / Plus Query: 346 gcaggaagagtggaggatccagatgctgccgctgcagttcctcctcctcaccgtgcaccc 405 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95395 gcaggaggagtggagagtccagatgctgccgctgcagttcctcctcctcaccgtgcaccc 95454 Query: 406 cgtcgtcgtgatgcagctgcggcaccgcggcggcgtgctcgagctccga 454 |||||||| ||||||||||| ||||||| |||||||||||| |||||| Sbjct: 95455 ggtcgtcgtcatgcagctgcgccaccgcgacggcgtgctcgacctccga 95503 Score = 83.8 bits (42), Expect = 1e-12 Identities = 66/74 (89%) Strand = Plus / Plus Query: 671 ctggccgagaagatgaagcgggacgtggacgtcggcctcctcgccgacttcaagaggttt 730 ||||||||||||||||||| |||||| ||||||||| || ||||||||||| |||| || Sbjct: 97112 ctggccgagaagatgaagcaggacgtcgacgtcggcatcgtcgccgacttccagagattc 97171 Query: 731 cgacgggagaaggc 744 || ||||||||||| Sbjct: 97172 cggcgggagaaggc 97185