BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem126d07
         (1014 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome...   242   2e-60
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...   242   2e-60
gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome...    84   1e-12

>gb|AC116368.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0061D06, complete sequence
          Length = 172126

 Score =  242 bits (122), Expect = 2e-60
 Identities = 282/335 (84%), Gaps = 9/335 (2%)
 Strand = Plus / Plus

                                                                         
Query: 262   gctcgttctgcgacggcatcgactacagctcggcgccg------gtggtagagaagctgg 315
             |||| |||||||||||||||||||||| |||| |||||      | ||| ||| ||||| 
Sbjct: 59906 gctccttctgcgacggcatcgactacacctcgtcgccgccgccggcggtggaggagctga 59965

                                                                         
Query: 316   tgcgcggcatggccgaggtgctgcgcgagctgttcaacatgccgttcccaacggtggccg 375
             | |||||||||||||||||| ||||||||||| |   |||||| ||||| |||||||| |
Sbjct: 59966 tccgcggcatggccgaggtggtgcgcgagctgctgggcatgcctttcccgacggtggcgg 60025

                                                                         
Query: 376   cggtcgggggcgacgtgaagacgtccctggccctggcgctcgtgctggcccacgacgaca 435
             | ||||| |||||||||| | |||||||||| |||||||| |||||||| ||||||||| 
Sbjct: 60026 ccgtcggcggcgacgtgaggtcgtccctggcgctggcgctggtgctggcgcacgacgacg 60085

                                                                         
Query: 436   ccacggtgctgcagcaagccaagattgaggcgaaggaggtgcgggacg---gccacgacg 492
              | | |||||  || ||| |||||| ||||||| |||||||  ||| |   |||||||||
Sbjct: 60086 tcgccgtgctaaagaaagtcaagatcgaggcgagggaggtggtggaggggcgccacgacg 60145

                                                                         
Query: 493   ccgtgccgccttacctgggggcgctgctccgcgacaaggcgtcgtatccgcagatgagct 552
             |||||||||| ||||| |||||||||||||| |||||| ||||||| |||||||||||||
Sbjct: 60146 ccgtgccgccgtacctcggggcgctgctccgggacaagtcgtcgtacccgcagatgagct 60205

                                                
Query: 553   ccgacctagtgctccggtcggcgaccatggacgga 587
             ||||||| ||||||||||||| |||||||| ||||
Sbjct: 60206 ccgacctggtgctccggtcggagaccatggccgga 60240


>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  242 bits (122), Expect = 2e-60
 Identities = 282/335 (84%), Gaps = 9/335 (2%)
 Strand = Plus / Minus

                                                                           
Query: 262     gctcgttctgcgacggcatcgactacagctcggcgccg------gtggtagagaagctgg 315
               |||| |||||||||||||||||||||| |||| |||||      | ||| ||| ||||| 
Sbjct: 9689771 gctccttctgcgacggcatcgactacacctcgtcgccgccgccggcggtggaggagctga 9689712

                                                                           
Query: 316     tgcgcggcatggccgaggtgctgcgcgagctgttcaacatgccgttcccaacggtggccg 375
               | |||||||||||||||||| ||||||||||| |   |||||| ||||| |||||||| |
Sbjct: 9689711 tccgcggcatggccgaggtggtgcgcgagctgctgggcatgcctttcccgacggtggcgg 9689652

                                                                           
Query: 376     cggtcgggggcgacgtgaagacgtccctggccctggcgctcgtgctggcccacgacgaca 435
               | ||||| |||||||||| | |||||||||| |||||||| |||||||| ||||||||| 
Sbjct: 9689651 ccgtcggcggcgacgtgaggtcgtccctggcgctggcgctggtgctggcgcacgacgacg 9689592

                                                                           
Query: 436     ccacggtgctgcagcaagccaagattgaggcgaaggaggtgcgggacg---gccacgacg 492
                | | |||||  || ||| |||||| ||||||| |||||||  ||| |   |||||||||
Sbjct: 9689591 tcgccgtgctaaagaaagtcaagatcgaggcgagggaggtggtggaggggcgccacgacg 9689532

                                                                           
Query: 493     ccgtgccgccttacctgggggcgctgctccgcgacaaggcgtcgtatccgcagatgagct 552
               |||||||||| ||||| |||||||||||||| |||||| ||||||| |||||||||||||
Sbjct: 9689531 ccgtgccgccgtacctcggggcgctgctccgggacaagtcgtcgtacccgcagatgagct 9689472

                                                  
Query: 553     ccgacctagtgctccggtcggcgaccatggacgga 587
               ||||||| ||||||||||||| |||||||| ||||
Sbjct: 9689471 ccgacctggtgctccggtcggagaccatggccgga 9689437



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                           
Query: 326     ggccgaggtgctgcgcgagctgttcaacatgccgttcccaacggtggccgcggtcggggg 385
               |||||||| | | |||| ||||||| ||||||||||||| || |  ||||||||||  ||
Sbjct: 9319052 ggccgaggcggtccgcgcgctgttcgacatgccgttcccgaccgccgccgcggtcgccgg 9318993

                                                                 
Query: 386     cgacgtgaagacgtccctggccctggcgctcgtgctggcccacgacgaca 435
               |||||| | | |||||||||| |||||||| |||||||| ||||||||||
Sbjct: 9318992 cgacgtcaggtcgtccctggcgctggcgctggtgctggcgcacgacgaca 9318943


>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0008E02, complete sequence
          Length = 152974

 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 93/110 (84%)
 Strand = Plus / Minus

                                                                        
Query: 326  ggccgaggtgctgcgcgagctgttcaacatgccgttcccaacggtggccgcggtcggggg 385
            |||||||| | | |||| ||||||| ||||||||||||| || |  ||||||||||  ||
Sbjct: 9453 ggccgaggcggtccgcgcgctgttcgacatgccgttcccgaccgccgccgcggtcgccgg 9394

                                                              
Query: 386  cgacgtgaagacgtccctggccctggcgctcgtgctggcccacgacgaca 435
            |||||| | | |||||||||| |||||||| |||||||| ||||||||||
Sbjct: 9393 cgacgtcaggtcgtccctggcgctggcgctggtgctggcgcacgacgaca 9344