BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125k10 (1191 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001064736.1| Oryza sativa (japonica cultivar-group) Os06g... 165 5e-37 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 dbj|AK065143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 5e-37 >ref|NM_001064736.1| Oryza sativa (japonica cultivar-group) Os06g0646700 (Os06g0646700) mRNA, complete cds Length = 1099 Score = 165 bits (83), Expect = 5e-37 Identities = 142/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Plus Query: 289 aggaggaggagctagcctggccggcggtggcgcgggggaagcggtcgcggtcg---cgcc 345 ||||||||||||| || |||||| ||||||| ||||||||||||||||||||| || | Sbjct: 324 aggaggaggagctggcgtggccgacggtggcacgggggaagcggtcgcggtcgtcgcggc 383 Query: 346 gccgctcgccgtccggctccggttcgtcggcgacgaaggggaggctggcccggggcagcc 405 ||||||||||||| || || || ||| ||||||| ||||||||| |||| |||| |||| Sbjct: 384 gccgctcgccgtcggggtcggggtcggcggcgaccaaggggaggtgggccaggggtagcc 443 Query: 406 cggcgtctcccctggactacagcggcggctccggctccggc 446 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 444 cggcgtctcccctcgactacagcggcggctccggctccggc 484 >dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 165 bits (83), Expect = 5e-37 Identities = 142/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 289 aggaggaggagctagcctggccggcggtggcgcgggggaagcggtcgcggtcg---cgcc 345 ||||||||||||| || |||||| ||||||| ||||||||||||||||||||| || | Sbjct: 26043855 aggaggaggagctggcgtggccgacggtggcacgggggaagcggtcgcggtcgtcgcggc 26043796 Query: 346 gccgctcgccgtccggctccggttcgtcggcgacgaaggggaggctggcccggggcagcc 405 ||||||||||||| || || || ||| ||||||| ||||||||| |||| |||| |||| Sbjct: 26043795 gccgctcgccgtcggggtcggggtcggcggcgaccaaggggaggtgggccaggggtagcc 26043736 Query: 406 cggcgtctcccctggactacagcggcggctccggctccggc 446 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 26043735 cggcgtctcccctcgactacagcggcggctccggctccggc 26043695 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 626 gaggctcccggagatccagcagctggtgcggtccctgacggtggagaacgatggccttcg 685 |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 26041035 gaggctgccggagattcagcagctggtgcggtcgctgacggtggagaacgatggccttcg 26040976 Query: 686 c 686 | Sbjct: 26040975 c 26040975 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 431 cggctccggctccggcgcttccacgagcggcggcgaggacggcgccttctgctcgccacc 490 |||||||||||||| ||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 26043698 cggctccggctccgccgcgtcgacgagcggcggcgaggacggggccttctgctctccacc 26043639 Query: 491 g 491 | Sbjct: 26043638 g 26043638 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 544 aggtgggctccgccggacggcgcccgtcgatcctgccggtcccgccgccccggcccgccg 603 |||||||| | ||||||||||||| | |||||| ||| |||||| ||||||||||||| Sbjct: 26041804 aggtgggccctgccggacggcgccagctgatcctaccgaccccgcctccccggcccgccg 26041745 Query: 604 gacagcggccgcggaagaagatg 626 ||||||| || |||||||||||| Sbjct: 26041744 gacagcgaccacggaagaagatg 26041722 >dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 165 bits (83), Expect = 5e-37 Identities = 142/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 289 aggaggaggagctagcctggccggcggtggcgcgggggaagcggtcgcggtcg---cgcc 345 ||||||||||||| || |||||| ||||||| ||||||||||||||||||||| || | Sbjct: 81713 aggaggaggagctggcgtggccgacggtggcacgggggaagcggtcgcggtcgtcgcggc 81654 Query: 346 gccgctcgccgtccggctccggttcgtcggcgacgaaggggaggctggcccggggcagcc 405 ||||||||||||| || || || ||| ||||||| ||||||||| |||| |||| |||| Sbjct: 81653 gccgctcgccgtcggggtcggggtcggcggcgaccaaggggaggtgggccaggggtagcc 81594 Query: 406 cggcgtctcccctggactacagcggcggctccggctccggc 446 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 81593 cggcgtctcccctcgactacagcggcggctccggctccggc 81553 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 626 gaggctcccggagatccagcagctggtgcggtccctgacggtggagaacgatggccttcg 685 |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 78893 gaggctgccggagattcagcagctggtgcggtcgctgacggtggagaacgatggccttcg 78834 Query: 686 c 686 | Sbjct: 78833 c 78833 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 431 cggctccggctccggcgcttccacgagcggcggcgaggacggcgccttctgctcgccacc 490 |||||||||||||| ||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 81556 cggctccggctccgccgcgtcgacgagcggcggcgaggacggggccttctgctctccacc 81497 Query: 491 g 491 | Sbjct: 81496 g 81496 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 544 aggtgggctccgccggacggcgcccgtcgatcctgccggtcccgccgccccggcccgccg 603 |||||||| | ||||||||||||| | |||||| ||| |||||| ||||||||||||| Sbjct: 79662 aggtgggccctgccggacggcgccagctgatcctaccgaccccgcctccccggcccgccg 79603 Query: 604 gacagcggccgcggaagaagatg 626 ||||||| || |||||||||||| Sbjct: 79602 gacagcgaccacggaagaagatg 79580 >dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 165 bits (83), Expect = 5e-37 Identities = 142/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Minus Query: 289 aggaggaggagctagcctggccggcggtggcgcgggggaagcggtcgcggtcg---cgcc 345 ||||||||||||| || |||||| ||||||| ||||||||||||||||||||| || | Sbjct: 23100 aggaggaggagctggcgtggccgacggtggcacgggggaagcggtcgcggtcgtcgcggc 23041 Query: 346 gccgctcgccgtccggctccggttcgtcggcgacgaaggggaggctggcccggggcagcc 405 ||||||||||||| || || || ||| ||||||| ||||||||| |||| |||| |||| Sbjct: 23040 gccgctcgccgtcggggtcggggtcggcggcgaccaaggggaggtgggccaggggtagcc 22981 Query: 406 cggcgtctcccctggactacagcggcggctccggctccggc 446 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 22980 cggcgtctcccctcgactacagcggcggctccggctccggc 22940 Score = 97.6 bits (49), Expect = 1e-16 Identities = 58/61 (95%) Strand = Plus / Minus Query: 626 gaggctcccggagatccagcagctggtgcggtccctgacggtggagaacgatggccttcg 685 |||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20280 gaggctgccggagattcagcagctggtgcggtcgctgacggtggagaacgatggccttcg 20221 Query: 686 c 686 | Sbjct: 20220 c 20220 Score = 81.8 bits (41), Expect = 6e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 431 cggctccggctccggcgcttccacgagcggcggcgaggacggcgccttctgctcgccacc 490 |||||||||||||| ||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 22943 cggctccggctccgccgcgtcgacgagcggcggcgaggacggggccttctgctctccacc 22884 Query: 491 g 491 | Sbjct: 22883 g 22883 Score = 77.8 bits (39), Expect = 9e-11 Identities = 72/83 (86%) Strand = Plus / Minus Query: 544 aggtgggctccgccggacggcgcccgtcgatcctgccggtcccgccgccccggcccgccg 603 |||||||| | ||||||||||||| | |||||| ||| |||||| ||||||||||||| Sbjct: 21049 aggtgggccctgccggacggcgccagctgatcctaccgaccccgcctccccggcccgccg 20990 Query: 604 gacagcggccgcggaagaagatg 626 ||||||| || |||||||||||| Sbjct: 20989 gacagcgaccacggaagaagatg 20967 >dbj|AK065143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A19, full insert sequence Length = 1102 Score = 165 bits (83), Expect = 5e-37 Identities = 142/161 (88%), Gaps = 3/161 (1%) Strand = Plus / Plus Query: 289 aggaggaggagctagcctggccggcggtggcgcgggggaagcggtcgcggtcg---cgcc 345 ||||||||||||| || |||||| ||||||| ||||||||||||||||||||| || | Sbjct: 325 aggaggaggagctggcgtggccgacggtggcacgggggaagcggtcgcggtcgtcgcggc 384 Query: 346 gccgctcgccgtccggctccggttcgtcggcgacgaaggggaggctggcccggggcagcc 405 ||||||||||||| || || || ||| ||||||| ||||||||| |||| |||| |||| Sbjct: 385 gccgctcgccgtcggggtcggggtcggcggcgaccaaggggaggtgggccaggggtagcc 444 Query: 406 cggcgtctcccctggactacagcggcggctccggctccggc 446 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 445 cggcgtctcccctcgactacagcggcggctccggctccggc 485