BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125j16 (871 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ244528.1| Zea mays clone 8883 mRNA sequence 599 e-168 ref|NM_001056719.1| Oryza sativa (japonica cultivar-group) Os03g... 454 e-124 dbj|AK108742.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 1e-30 gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome... 143 1e-30 >gb|DQ244528.1| Zea mays clone 8883 mRNA sequence Length = 972 Score = 599 bits (302), Expect = e-168 Identities = 470/526 (89%) Strand = Plus / Plus Query: 76 agatggacggggaggatgagaacatcgggccgttccgccgcaccagcacgcgggcgcgcc 135 ||||||| ||||| || |||||| |||||||||||||||| || ||| |||| |||||| Sbjct: 140 agatggatggggatgaggagaacgtcgggccgttccgccggactagcgcgcgcacgcgcc 199 Query: 136 gtatggccacgcgcatggcttccgccctcgccagctctgacaaccgcgcccagactgcat 195 | ||||||||||||||||| ||||| |||||||||| ||||| ||||||||| |||||| Sbjct: 200 gcatggccacgcgcatggcgtccgcgatcgccagctcggacaatcgcgcccaggctgcat 259 Query: 196 tagctcgtcttgaagctcttgagagtgataatgctggggttgaggtagtagatcttaatg 255 ||||||| ||||||||||||||||| ||||||| |||||| ||||| ||||||||||||| Sbjct: 260 tagctcgccttgaagctcttgagagcgataatggtggggtcgaggtggtagatcttaatg 319 Query: 256 atgatgagtatggatctacagatgaggaagatcatgttctcatgcaaaagaagcagtcaa 315 |||||||||| ||||| || ||||| ||||| | ||||||||||||||| |||||||| | Sbjct: 320 atgatgagtacggatccacggatgaagaagaccctgttctcatgcaaaaaaagcagtcca 379 Query: 316 agaacatgaaacgcaagacaaggcaaggaaaagctttggagaagagggcggcaaggtcat 375 ||| ||||||||| || ||||||||||| |||||||||||||||||||| ||||| ||| Sbjct: 380 agatcatgaaacgtaaaacaaggcaagggaaagctttggagaagagggcagcaagatcac 439 Query: 376 tcatggatgtgttacaagaggcaaatctggaggccctgcctcctcatgtcccaacatatt 435 ||||||||||| ||||||| |||||| ||||| || | ||||||||||| |||||||||| Sbjct: 440 tcatggatgtgctacaagaagcaaatttggagtccgttcctcctcatgtgccaacatatt 499 Query: 436 tgagggctgctgtgggtccaccgagcacttcatcccggcgccattactgctcagtatgcg 495 |||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||| Sbjct: 500 caagggctgctgtgggtccaccgagcacttcatctcgacgccactactgctcagtttgcg 559 Query: 496 ggagttctgcaaactacacatgcgtcaggtgtgggacacggttctgttcatgccgctgtc 555 | || ||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 560 gtagctctgcaacctacacatgcgtgaggtgtgggacacggttctgttcatgccgctgtc 619 Query: 556 aagttatacacaatgatacccgctgcctgaaatttgtggcttgatc 601 |||| |||||||||||||| ||||||||||| |||||||||||||| Sbjct: 620 aagtcatacacaatgatacacgctgcctgaagtttgtggcttgatc 665 >ref|NM_001056719.1| Oryza sativa (japonica cultivar-group) Os03g0367800 (Os03g0367800) mRNA, partial cds Length = 670 Score = 454 bits (229), Expect = e-124 Identities = 447/519 (86%), Gaps = 3/519 (0%) Strand = Plus / Plus Query: 86 ggaggatgagaacatcgggccgttccgccgcaccagcacgcgggcgcgccgtatggccac 145 |||||| |||||| | ||||||||||||||||||||| ||||| |||| || |||||||| Sbjct: 98 ggaggaggagaacgtggggccgttccgccgcaccagcgcgcggacgcggcggatggccac 157 Query: 146 gcgcatggcttccgccctcgccagctctgacaaccgcgcccagactgcattagctcgtct 205 ||||||||| ||||| ||||||||||| ||||||||||| ||| ||||| |||||||||| Sbjct: 158 gcgcatggcctccgcgctcgccagctccgacaaccgcgcgcaggctgcactagctcgtct 217 Query: 206 tgaagctcttgagagtgataatgctggggttgaggtagtagatcttaa---tgatgatga 262 |||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 218 tgaagcgcttgagagtgataatgctggccctgaggtcgtagatcttaacgatgatgatga 277 Query: 263 gtatggatctacagatgaggaagatcatgttctcatgcaaaagaagcagtcaaagaacat 322 ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| || Sbjct: 278 atatggatctgcagatgaggaagaccatgttctcatgcagaggaagcagtcaaagaatat 337 Query: 323 gaaacgcaagacaaggcaaggaaaagctttggagaagagggcggcaaggtcattcatgga 382 ||| |||||||| |||||||| || || |||||||||| |||||| || || |||||||| Sbjct: 338 gaagcgcaagacgaggcaagggaaggcattggagaagaaggcggcgagatctttcatgga 397 Query: 383 tgtgttacaagaggcaaatctggaggccctgcctcctcatgtcccaacatatttgagggc 442 |||||||| |||||||| |||||| | |||||||| ||||||||||| || | ||||| Sbjct: 398 cgtgttacaggaggcaaacctggagtcgctgcctccccatgtcccaacgtactccagggc 457 Query: 443 tgctgtgggtccaccgagcacttcatcccggcgccattactgctcagtatgcgggagttc 502 || || ||||| |||||||| || |||||||||||||||||||| || ||||| || | Sbjct: 458 cgccgttggtcccccgagcacctcgtcccggcgccattactgctcggtctgcggcagcac 517 Query: 503 tgcaaactacacatgcgtcaggtgtgggacacggttctgttcatgccgctgtcaagttat 562 || |||||||| ||||||||||| ||||| ||||||| || |||||||| || || || Sbjct: 518 ggcgaactacacgtgcgtcaggtgcgggacgaggttctgctcgtgccgctgccaggtcat 577 Query: 563 acacaatgatacccgctgcctgaaatttgtggcttgatc 601 ||||| |||||||||||||||||||| ||||| ||||| Sbjct: 578 tcacaacgatacccgctgcctgaaattcgtggcctgatc 616 >dbj|AK108742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-E06, full insert sequence Length = 670 Score = 454 bits (229), Expect = e-124 Identities = 447/519 (86%), Gaps = 3/519 (0%) Strand = Plus / Plus Query: 86 ggaggatgagaacatcgggccgttccgccgcaccagcacgcgggcgcgccgtatggccac 145 |||||| |||||| | ||||||||||||||||||||| ||||| |||| || |||||||| Sbjct: 98 ggaggaggagaacgtggggccgttccgccgcaccagcgcgcggacgcggcggatggccac 157 Query: 146 gcgcatggcttccgccctcgccagctctgacaaccgcgcccagactgcattagctcgtct 205 ||||||||| ||||| ||||||||||| ||||||||||| ||| ||||| |||||||||| Sbjct: 158 gcgcatggcctccgcgctcgccagctccgacaaccgcgcgcaggctgcactagctcgtct 217 Query: 206 tgaagctcttgagagtgataatgctggggttgaggtagtagatcttaa---tgatgatga 262 |||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 218 tgaagcgcttgagagtgataatgctggccctgaggtcgtagatcttaacgatgatgatga 277 Query: 263 gtatggatctacagatgaggaagatcatgttctcatgcaaaagaagcagtcaaagaacat 322 ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||||| || Sbjct: 278 atatggatctgcagatgaggaagaccatgttctcatgcagaggaagcagtcaaagaatat 337 Query: 323 gaaacgcaagacaaggcaaggaaaagctttggagaagagggcggcaaggtcattcatgga 382 ||| |||||||| |||||||| || || |||||||||| |||||| || || |||||||| Sbjct: 338 gaagcgcaagacgaggcaagggaaggcattggagaagaaggcggcgagatctttcatgga 397 Query: 383 tgtgttacaagaggcaaatctggaggccctgcctcctcatgtcccaacatatttgagggc 442 |||||||| |||||||| |||||| | |||||||| ||||||||||| || | ||||| Sbjct: 398 cgtgttacaggaggcaaacctggagtcgctgcctccccatgtcccaacgtactccagggc 457 Query: 443 tgctgtgggtccaccgagcacttcatcccggcgccattactgctcagtatgcgggagttc 502 || || ||||| |||||||| || |||||||||||||||||||| || ||||| || | Sbjct: 458 cgccgttggtcccccgagcacctcgtcccggcgccattactgctcggtctgcggcagcac 517 Query: 503 tgcaaactacacatgcgtcaggtgtgggacacggttctgttcatgccgctgtcaagttat 562 || |||||||| ||||||||||| ||||| ||||||| || |||||||| || || || Sbjct: 518 ggcgaactacacgtgcgtcaggtgcgggacgaggttctgctcgtgccgctgccaggtcat 577 Query: 563 acacaatgatacccgctgcctgaaatttgtggcttgatc 601 ||||| |||||||||||||||||||| ||||| ||||| Sbjct: 578 tcacaacgatacccgctgcctgaaattcgtggcctgatc 616 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 143 bits (72), Expect = 1e-30 Identities = 174/208 (83%) Strand = Plus / Plus Query: 394 aggcaaatctggaggccctgcctcctcatgtcccaacatatttgagggctgctgtgggtc 453 ||||||| |||||| | |||||||| ||||||||||| || | ||||| || || |||| Sbjct: 14260640 aggcaaacctggagtcgctgcctccccatgtcccaacgtactccagggccgccgttggtc 14260699 Query: 454 caccgagcacttcatcccggcgccattactgctcagtatgcgggagttctgcaaactaca 513 | |||||||| || |||||||||||||||||||| || ||||| || | || ||||||| Sbjct: 14260700 ccccgagcacctcgtcccggcgccattactgctcggtctgcggcagcacggcgaactaca 14260759 Query: 514 catgcgtcaggtgtgggacacggttctgttcatgccgctgtcaagttatacacaatgata 573 | ||||||||||| ||||| ||||||| || |||||||| || || || ||||| |||| Sbjct: 14260760 cgtgcgtcaggtgcgggacgaggttctgctcgtgccgctgccaggtcattcacaacgata 14260819 Query: 574 cccgctgcctgaaatttgtggcttgatc 601 |||||||||||||||| ||||| ||||| Sbjct: 14260820 cccgctgcctgaaattcgtggcctgatc 14260847 Score = 117 bits (59), Expect = 8e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 86 ggaggatgagaacatcgggccgttccgccgcaccagcacgcgggcgcgccgtatggccac 145 |||||| |||||| | ||||||||||||||||||||| ||||| |||| || |||||||| Sbjct: 14257851 ggaggaggagaacgtggggccgttccgccgcaccagcgcgcggacgcggcggatggccac 14257910 Query: 146 gcgcatggcttccgccctcgccagctctgacaaccgcgc 184 ||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 14257911 gcgcatggcctccgcgctcgccagctccgacaaccgcgc 14257949 Score = 109 bits (55), Expect = 2e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 190 ctgcattagctcgtcttgaagctcttgagagtgataatgctggggttgaggtagtagatc 249 ||||| |||||||||||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 14259032 ctgcactagctcgtcttgaagcgcttgagagtgataatgctggccctgaggtcgtagatc 14259091 Query: 250 tta---atgatgatgagtatggatctacagatgaggaagatcatg 291 ||| |||||||||| ||||||||| ||||||||||||| |||| Sbjct: 14259092 ttaacgatgatgatgaatatggatctgcagatgaggaagaccatg 14259136 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 291 gttctcatgcaaaagaagcagtcaaagaacatgaaacgcaagacaaggcaaggaaaagct 350 ||||||||||| | ||||||||||||||| ||||| |||||||| |||||||| || || Sbjct: 14260395 gttctcatgcagaggaagcagtcaaagaatatgaagcgcaagacgaggcaagggaaggca 14260454 Query: 351 ttggagaagagggcggcaaggtcattcatggatgtgttacaagagg 396 |||||||||| |||||| || || |||||||| |||||||| |||| Sbjct: 14260455 ttggagaagaaggcggcgagatctttcatggacgtgttacaggagg 14260500 Score = 87.7 bits (44), Expect = 7e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 93 gagaacatcgggccgttccgccgcaccagcacgcgggcgcgccgtatggccacgcgcatg 152 |||||| | |||||||||||| |||||||| | ||| |||| | ||||||||||||||| Sbjct: 25709539 gagaacgtggggccgttccgcggcaccagcgcacggacgcggtggatggccacgcgcatg 25709480 Query: 153 gcttccgccctcgccagctctgacaaccgcgc 184 || ||||| ||||||||||| ||||||||||| Sbjct: 25709479 gcctccgcgctcgccagctccgacaaccgcgc 25709448 Score = 81.8 bits (41), Expect = 4e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 102 gggccgttccgccgcaccagcacgcgggcgcgccgtatggccacgcgcatggcttccgcc 161 |||||||||| ||||| |||| ||||| |||| || ||||||||||||||||| ||||| Sbjct: 14229839 gggccgttccaccgcatcagcgcgcggacgcggcggatggccacgcgcatggcatccgcg 14229780 Query: 162 ctcgccagctctgacaaccgc 182 ||||| ||||| ||||||||| Sbjct: 14229779 ctcgctagctccgacaaccgc 14229759 >gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 143 bits (72), Expect = 1e-30 Identities = 174/208 (83%) Strand = Plus / Plus Query: 394 aggcaaatctggaggccctgcctcctcatgtcccaacatatttgagggctgctgtgggtc 453 ||||||| |||||| | |||||||| ||||||||||| || | ||||| || || |||| Sbjct: 77053 aggcaaacctggagtcgctgcctccccatgtcccaacgtactccagggccgccgttggtc 77112 Query: 454 caccgagcacttcatcccggcgccattactgctcagtatgcgggagttctgcaaactaca 513 | |||||||| || |||||||||||||||||||| || ||||| || | || ||||||| Sbjct: 77113 ccccgagcacctcgtcccggcgccattactgctcggtctgcggcagcacggcgaactaca 77172 Query: 514 catgcgtcaggtgtgggacacggttctgttcatgccgctgtcaagttatacacaatgata 573 | ||||||||||| ||||| ||||||| || |||||||| || || || ||||| |||| Sbjct: 77173 cgtgcgtcaggtgcgggacgaggttctgctcgtgccgctgccaggtcattcacaacgata 77232 Query: 574 cccgctgcctgaaatttgtggcttgatc 601 |||||||||||||||| ||||| ||||| Sbjct: 77233 cccgctgcctgaaattcgtggcctgatc 77260 Score = 117 bits (59), Expect = 8e-23 Identities = 89/99 (89%) Strand = Plus / Plus Query: 86 ggaggatgagaacatcgggccgttccgccgcaccagcacgcgggcgcgccgtatggccac 145 |||||| |||||| | ||||||||||||||||||||| ||||| |||| || |||||||| Sbjct: 74264 ggaggaggagaacgtggggccgttccgccgcaccagcgcgcggacgcggcggatggccac 74323 Query: 146 gcgcatggcttccgccctcgccagctctgacaaccgcgc 184 ||||||||| ||||| ||||||||||| ||||||||||| Sbjct: 74324 gcgcatggcctccgcgctcgccagctccgacaaccgcgc 74362 Score = 109 bits (55), Expect = 2e-20 Identities = 93/105 (88%), Gaps = 3/105 (2%) Strand = Plus / Plus Query: 190 ctgcattagctcgtcttgaagctcttgagagtgataatgctggggttgaggtagtagatc 249 ||||| |||||||||||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 75445 ctgcactagctcgtcttgaagcgcttgagagtgataatgctggccctgaggtcgtagatc 75504 Query: 250 tta---atgatgatgagtatggatctacagatgaggaagatcatg 291 ||| |||||||||| ||||||||| ||||||||||||| |||| Sbjct: 75505 ttaacgatgatgatgaatatggatctgcagatgaggaagaccatg 75549 Score = 99.6 bits (50), Expect = 2e-17 Identities = 92/106 (86%) Strand = Plus / Plus Query: 291 gttctcatgcaaaagaagcagtcaaagaacatgaaacgcaagacaaggcaaggaaaagct 350 ||||||||||| | ||||||||||||||| ||||| |||||||| |||||||| || || Sbjct: 76808 gttctcatgcagaggaagcagtcaaagaatatgaagcgcaagacgaggcaagggaaggca 76867 Query: 351 ttggagaagagggcggcaaggtcattcatggatgtgttacaagagg 396 |||||||||| |||||| || || |||||||| |||||||| |||| Sbjct: 76868 ttggagaagaaggcggcgagatctttcatggacgtgttacaggagg 76913 Score = 81.8 bits (41), Expect = 4e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 102 gggccgttccgccgcaccagcacgcgggcgcgccgtatggccacgcgcatggcttccgcc 161 |||||||||| ||||| |||| ||||| |||| || ||||||||||||||||| ||||| Sbjct: 46252 gggccgttccaccgcatcagcgcgcggacgcggcggatggccacgcgcatggcatccgcg 46193 Query: 162 ctcgccagctctgacaaccgc 182 ||||| ||||| ||||||||| Sbjct: 46192 ctcgctagctccgacaaccgc 46172