BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125i19 (1042 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049766.1| Oryza sativa (japonica cultivar-group) Os01g... 295 2e-76 dbj|AK119796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 295 2e-76 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic D... 198 3e-47 >ref|NM_001049766.1| Oryza sativa (japonica cultivar-group) Os01g0528000 (Os01g0528000) mRNA, partial cds Length = 802 Score = 295 bits (149), Expect = 2e-76 Identities = 274/316 (86%), Gaps = 6/316 (1%) Strand = Plus / Plus Query: 203 cggcgccgtctccggcaccctccctgcggccgaggccttcgccgtgcacttcccggggta 262 |||||||||||| |||||| |||| || |||||||| |||||||| |||| |||||| || Sbjct: 342 cggcgccgtctcgggcaccatcccggccgccgaggcattcgccgtccactacccgggcta 401 Query: 263 cccctcctcgcccgcccgcgccgctcgctccctgggcggcctccccgccatcgccaaggc 322 ||| ||||| || ||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 402 cccgtcctccccggcccgcgccgcccagaccctcggcggcctccccgccatcgccaaggt 461 Query: 323 ccggagctcggaccccggcgcccgcctcgagctccgcttccgccccgaggacccctactg 382 | || |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 462 caggggctccgaccctggcgcccgcctcgagctccgcttccgccccgaggatccctactg 521 Query: 383 ccacccggccttcggcgagccccgcgcctccgccggcctcgtcctccgcctctccaggcc 442 ||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 522 ccacccggccttcggtgagccccgcatgtccgccggcctggtgctccgcctctccaggcc 581 Query: 443 caaggggggaggcgccgccgcgccgccgcgggctgaggtggtcgcgcgcgtccggaatgc 502 |||| |||| ||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 582 caag------ggcggtaccgcgccgccgcgcgccgaggtggttgcgcgtgtccggaacgc 635 Query: 503 ctaccacttcgaaggt 518 |||||||||||||||| Sbjct: 636 ctaccacttcgaaggt 651 >dbj|AK119796.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-D06, full insert sequence Length = 802 Score = 295 bits (149), Expect = 2e-76 Identities = 274/316 (86%), Gaps = 6/316 (1%) Strand = Plus / Plus Query: 203 cggcgccgtctccggcaccctccctgcggccgaggccttcgccgtgcacttcccggggta 262 |||||||||||| |||||| |||| || |||||||| |||||||| |||| |||||| || Sbjct: 342 cggcgccgtctcgggcaccatcccggccgccgaggcattcgccgtccactacccgggcta 401 Query: 263 cccctcctcgcccgcccgcgccgctcgctccctgggcggcctccccgccatcgccaaggc 322 ||| ||||| || ||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 402 cccgtcctccccggcccgcgccgcccagaccctcggcggcctccccgccatcgccaaggt 461 Query: 323 ccggagctcggaccccggcgcccgcctcgagctccgcttccgccccgaggacccctactg 382 | || |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 462 caggggctccgaccctggcgcccgcctcgagctccgcttccgccccgaggatccctactg 521 Query: 383 ccacccggccttcggcgagccccgcgcctccgccggcctcgtcctccgcctctccaggcc 442 ||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||| Sbjct: 522 ccacccggccttcggtgagccccgcatgtccgccggcctggtgctccgcctctccaggcc 581 Query: 443 caaggggggaggcgccgccgcgccgccgcgggctgaggtggtcgcgcgcgtccggaatgc 502 |||| |||| ||||||||||||| || |||||||| ||||| |||||||| || Sbjct: 582 caag------ggcggtaccgcgccgccgcgcgccgaggtggttgcgcgtgtccggaacgc 635 Query: 503 ctaccacttcgaaggt 518 |||||||||||||||| Sbjct: 636 ctaccacttcgaaggt 651 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 198 bits (100), Expect = 3e-47 Identities = 168/191 (87%), Gaps = 6/191 (3%) Strand = Plus / Plus Query: 328 gctcggaccccggcgcccgcctcgagctccgcttccgccccgaggacccctactgccacc 387 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 18974094 gctccgaccctggcgcccgcctcgagctccgcttccgccccgaggatccctactgccacc 18974153 Query: 388 cggccttcggcgagccccgcgcctccgccggcctcgtcctccgcctctccaggcccaagg 447 |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 18974154 cggccttcggtgagccccgcatgtccgccggcctggtgctccgcctctccaggcccaag- 18974212 Query: 448 ggggaggcgccgccgcgccgccgcgggctgaggtggtcgcgcgcgtccggaatgcctacc 507 |||| ||||||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 18974213 -----ggcggtaccgcgccgccgcgcgccgaggtggttgcgcgtgtccggaacgcctacc 18974267 Query: 508 acttcgaaggt 518 ||||||||||| Sbjct: 18974268 acttcgaaggt 18974278 Score = 109 bits (55), Expect = 2e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 203 cggcgccgtctccggcaccctccctgcggccgaggccttcgccgtgcacttcccggggta 262 |||||||||||| |||||| |||| || |||||||| |||||||| |||| |||||| || Sbjct: 18973875 cggcgccgtctcgggcaccatcccggccgccgaggcattcgccgtccactacccgggcta 18973934 Query: 263 cccctcctcgcccgcccgcgccgctcgctccctgggcggcctccccgccatcgccaagg 321 ||| ||||| || ||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 18973935 cccgtcctccccggcccgcgccgcccagaccctcggcggcctccccgccatcgccaagg 18973993 Score = 105 bits (53), Expect = 4e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 515 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaagtgaggaaaagaaa 574 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 18975474 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaaacgagaaaaagaaa 18975533 Query: 575 acggtcagattgtccaaatgataaagaagattt 607 || | || ||||||||| |||||||| |||| Sbjct: 18975534 acatccggagtgtccaaataataaagaacattt 18975566 Score = 87.7 bits (44), Expect = 8e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 636 acagatgatggagatgtcatgatgttggtaccaccactcttctcagtgaaggatagacca 695 |||||| ||| ||||||||||||||| || ||||||||||||||| | ||||||| |||| Sbjct: 18975657 acagataatgaagatgtcatgatgttagtgccaccactcttctcaataaaggataaacca 18975716 Query: 696 acaaagatagcg 707 |||||||||||| Sbjct: 18975717 acaaagatagcg 18975728 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 707 gcttctaccatcgtccaatgcactatccaagagcatgcaaaggggagttgtacagcatcg 766 |||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 18976632 gcttctcccatcgtctaatgcattgtccaaaagcatgcaaaggggagttgtacagcatcg 18976691 Query: 767 gtgggag 773 |||||| Sbjct: 18976692 atgggag 18976698 >dbj|AP004357.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1074C08 Length = 165701 Score = 198 bits (100), Expect = 3e-47 Identities = 168/191 (87%), Gaps = 6/191 (3%) Strand = Plus / Plus Query: 328 gctcggaccccggcgcccgcctcgagctccgcttccgccccgaggacccctactgccacc 387 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 146484 gctccgaccctggcgcccgcctcgagctccgcttccgccccgaggatccctactgccacc 146543 Query: 388 cggccttcggcgagccccgcgcctccgccggcctcgtcctccgcctctccaggcccaagg 447 |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 146544 cggccttcggtgagccccgcatgtccgccggcctggtgctccgcctctccaggcccaag- 146602 Query: 448 ggggaggcgccgccgcgccgccgcgggctgaggtggtcgcgcgcgtccggaatgcctacc 507 |||| ||||||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 146603 -----ggcggtaccgcgccgccgcgcgccgaggtggttgcgcgtgtccggaacgcctacc 146657 Query: 508 acttcgaaggt 518 ||||||||||| Sbjct: 146658 acttcgaaggt 146668 Score = 109 bits (55), Expect = 2e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 203 cggcgccgtctccggcaccctccctgcggccgaggccttcgccgtgcacttcccggggta 262 |||||||||||| |||||| |||| || |||||||| |||||||| |||| |||||| || Sbjct: 146265 cggcgccgtctcgggcaccatcccggccgccgaggcattcgccgtccactacccgggcta 146324 Query: 263 cccctcctcgcccgcccgcgccgctcgctccctgggcggcctccccgccatcgccaagg 321 ||| ||||| || ||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 146325 cccgtcctccccggcccgcgccgcccagaccctcggcggcctccccgccatcgccaagg 146383 Score = 105 bits (53), Expect = 4e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 515 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaagtgaggaaaagaaa 574 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 147864 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaaacgagaaaaagaaa 147923 Query: 575 acggtcagattgtccaaatgataaagaagattt 607 || | || ||||||||| |||||||| |||| Sbjct: 147924 acatccggagtgtccaaataataaagaacattt 147956 Score = 87.7 bits (44), Expect = 8e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 636 acagatgatggagatgtcatgatgttggtaccaccactcttctcagtgaaggatagacca 695 |||||| ||| ||||||||||||||| || ||||||||||||||| | ||||||| |||| Sbjct: 148047 acagataatgaagatgtcatgatgttagtgccaccactcttctcaataaaggataaacca 148106 Query: 696 acaaagatagcg 707 |||||||||||| Sbjct: 148107 acaaagatagcg 148118 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 707 gcttctaccatcgtccaatgcactatccaagagcatgcaaaggggagttgtacagcatcg 766 |||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 149022 gcttctcccatcgtctaatgcattgtccaaaagcatgcaaaggggagttgtacagcatcg 149081 Query: 767 gtgggag 773 |||||| Sbjct: 149082 atgggag 149088 >dbj|AP003370.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129H01 Length = 101104 Score = 198 bits (100), Expect = 3e-47 Identities = 168/191 (87%), Gaps = 6/191 (3%) Strand = Plus / Plus Query: 328 gctcggaccccggcgcccgcctcgagctccgcttccgccccgaggacccctactgccacc 387 |||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 31137 gctccgaccctggcgcccgcctcgagctccgcttccgccccgaggatccctactgccacc 31196 Query: 388 cggccttcggcgagccccgcgcctccgccggcctcgtcctccgcctctccaggcccaagg 447 |||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 31197 cggccttcggtgagccccgcatgtccgccggcctggtgctccgcctctccaggcccaag- 31255 Query: 448 ggggaggcgccgccgcgccgccgcgggctgaggtggtcgcgcgcgtccggaatgcctacc 507 |||| ||||||||||||| || |||||||| ||||| |||||||| ||||||| Sbjct: 31256 -----ggcggtaccgcgccgccgcgcgccgaggtggttgcgcgtgtccggaacgcctacc 31310 Query: 508 acttcgaaggt 518 ||||||||||| Sbjct: 31311 acttcgaaggt 31321 Score = 109 bits (55), Expect = 2e-20 Identities = 103/119 (86%) Strand = Plus / Plus Query: 203 cggcgccgtctccggcaccctccctgcggccgaggccttcgccgtgcacttcccggggta 262 |||||||||||| |||||| |||| || |||||||| |||||||| |||| |||||| || Sbjct: 30918 cggcgccgtctcgggcaccatcccggccgccgaggcattcgccgtccactacccgggcta 30977 Query: 263 cccctcctcgcccgcccgcgccgctcgctccctgggcggcctccccgccatcgccaagg 321 ||| ||||| || ||||||||||| | |||| ||||||||||||||||||||||||| Sbjct: 30978 cccgtcctccccggcccgcgccgcccagaccctcggcggcctccccgccatcgccaagg 31036 Score = 105 bits (53), Expect = 4e-19 Identities = 83/93 (89%) Strand = Plus / Plus Query: 515 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaagtgaggaaaagaaa 574 |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 32517 aggtatggcagattttcagcatgttgttccagtgcatgctgcagaaacgagaaaaagaaa 32576 Query: 575 acggtcagattgtccaaatgataaagaagattt 607 || | || ||||||||| |||||||| |||| Sbjct: 32577 acatccggagtgtccaaataataaagaacattt 32609 Score = 87.7 bits (44), Expect = 8e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 636 acagatgatggagatgtcatgatgttggtaccaccactcttctcagtgaaggatagacca 695 |||||| ||| ||||||||||||||| || ||||||||||||||| | ||||||| |||| Sbjct: 32700 acagataatgaagatgtcatgatgttagtgccaccactcttctcaataaaggataaacca 32759 Query: 696 acaaagatagcg 707 |||||||||||| Sbjct: 32760 acaaagatagcg 32771 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 707 gcttctaccatcgtccaatgcactatccaagagcatgcaaaggggagttgtacagcatcg 766 |||||| |||||||| |||||| | ||||| ||||||||||||||||||||||||||||| Sbjct: 33675 gcttctcccatcgtctaatgcattgtccaaaagcatgcaaaggggagttgtacagcatcg 33734 Query: 767 gtgggag 773 |||||| Sbjct: 33735 atgggag 33741