BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125d21 (1204 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001059920.1| Oryza sativa (japonica cultivar-group) Os04g... 339 2e-89 dbj|AK066169.1| Oryza sativa (japonica cultivar-group) cDNA clon... 339 2e-89 emb|CT827956.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 165 5e-37 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 165 5e-37 emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4,... 165 5e-37 >ref|NM_001059920.1| Oryza sativa (japonica cultivar-group) Os04g0530000 (Os04g0530000) mRNA, complete cds Length = 964 Score = 339 bits (171), Expect = 2e-89 Identities = 352/411 (85%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 575 ggaagaagaagagcatatcttgctagagttggatgattgtctttattccgacataccacc 634 |||||| |||||| || ||||||| ||||||||||||||||||||||||||| | | ||| Sbjct: 381 ggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaacc 440 Query: 635 aaatgctccatatgtactctttggtttggatacattgactcctaccttgatagtaggtga 694 ||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||| Sbjct: 441 aaatgcttcatatgtgctctctggtctggatacattgactcctaccttgatactaggtga 500 Query: 695 tggtctgaagatgattggagaatacgaagaaactgttggcacctgttatttattctcaga 754 ||| ||||| ||||||||||||||| |||| ||| ||||||| || ||||| |||||||| Sbjct: 501 tggcctgaaaatgattggagaataccaagagactattggcacatgctatttgttctcaga 560 Query: 755 gagtgatgctccaccaaaacccattcgcgatgagatggcagcatctggagaaaataagga 814 | ||||||||||||||||||||| || |||||||||| | ||| |||||| ||||| Sbjct: 561 aacaaatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaagga 620 Query: 815 caagcaagccagcagtagtaaggaatcaccatccaaggaggtgaaacatctggcaagcgt 874 ||||||||||||| |||| |||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 621 caagcaagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgt 680 Query: 875 tcacaagatccttaaatttcgatctattaatgtggatcatcagcagcatagagcatacca 934 ||| |||||||| |||||||| ||||| |||| ||||||| |||||| |||||| ||| Sbjct: 681 tcagaagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacag 740 Query: 935 gcatagggacagggaaatttgaaacaaaatctgtagctgtttttttcttct 985 | ||| || || ||||||||||||| || |||||| |||||||| |||| Sbjct: 741 ggataatgagagagaaatttgaaacagaacttgtagc-gttttttttttct 790 >dbj|AK066169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052P20, full insert sequence Length = 966 Score = 339 bits (171), Expect = 2e-89 Identities = 352/411 (85%), Gaps = 1/411 (0%) Strand = Plus / Plus Query: 575 ggaagaagaagagcatatcttgctagagttggatgattgtctttattccgacataccacc 634 |||||| |||||| || ||||||| ||||||||||||||||||||||||||| | | ||| Sbjct: 383 ggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaacc 442 Query: 635 aaatgctccatatgtactctttggtttggatacattgactcctaccttgatagtaggtga 694 ||||||| ||||||| |||| |||| |||||||||||||||||||||||||| ||||||| Sbjct: 443 aaatgcttcatatgtgctctctggtctggatacattgactcctaccttgatactaggtga 502 Query: 695 tggtctgaagatgattggagaatacgaagaaactgttggcacctgttatttattctcaga 754 ||| ||||| ||||||||||||||| |||| ||| ||||||| || ||||| |||||||| Sbjct: 503 tggcctgaaaatgattggagaataccaagagactattggcacatgctatttgttctcaga 562 Query: 755 gagtgatgctccaccaaaacccattcgcgatgagatggcagcatctggagaaaataagga 814 | ||||||||||||||||||||| || |||||||||| | ||| |||||| ||||| Sbjct: 563 aacaaatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaagga 622 Query: 815 caagcaagccagcagtagtaaggaatcaccatccaaggaggtgaaacatctggcaagcgt 874 ||||||||||||| |||| |||||| ||||| ||||||||||| ||||| |||||||| Sbjct: 623 caagcaagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgt 682 Query: 875 tcacaagatccttaaatttcgatctattaatgtggatcatcagcagcatagagcatacca 934 ||| |||||||| |||||||| ||||| |||| ||||||| |||||| |||||| ||| Sbjct: 683 tcagaagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacag 742 Query: 935 gcatagggacagggaaatttgaaacaaaatctgtagctgtttttttcttct 985 | ||| || || ||||||||||||| || |||||| |||||||| |||| Sbjct: 743 ggataatgagagagaaatttgaaacagaacttgtagc-gttttttttttct 792 >emb|CT827956.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0155K17, complete sequence Length = 81888 Score = 165 bits (83), Expect = 5e-37 Identities = 192/227 (84%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 759 gatgctccaccaaaacccattcgcgatgagatggcagcatctggagaaaataaggacaag 818 |||||||||||||||||||||| || |||||||||| | ||| |||||| ||||||||| Sbjct: 50222 gatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaaggacaag 50163 Query: 819 caagccagcagtagtaaggaatcaccatccaaggaggtgaaacatctggcaagcgttcac 878 ||||||||| |||| |||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 50162 caagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgttcag 50103 Query: 879 aagatccttaaatttcgatctattaatgtggatcatcagcagcatagagcataccagcat 938 |||||||| |||||||| ||||| |||| ||||||| |||||| |||||| ||| | || Sbjct: 50102 aagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacagggat 50043 Query: 939 agggacagggaaatttgaaacaaaatctgtagctgtttttttcttct 985 | || || ||||||||||||| || |||||| |||||||| |||| Sbjct: 50042 aatgagagagaaatttgaaacagaacttgtagc-gttttttttttct 49997 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 575 ggaagaagaagagcatatcttgctagagttggatgattgtctttattccgacataccacc 634 |||||| |||||| || ||||||| ||||||||||||||||||||||||||| | | ||| Sbjct: 53156 ggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaacc 53097 Query: 635 aaatgctccatatgtactct 654 ||||||| ||||||| |||| Sbjct: 53096 aaatgcttcatatgtgctct 53077 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 165 bits (83), Expect = 5e-37 Identities = 192/227 (84%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 759 gatgctccaccaaaacccattcgcgatgagatggcagcatctggagaaaataaggacaag 818 |||||||||||||||||||||| || |||||||||| | ||| |||||| ||||||||| Sbjct: 26485186 gatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaaggacaag 26485127 Query: 819 caagccagcagtagtaaggaatcaccatccaaggaggtgaaacatctggcaagcgttcac 878 ||||||||| |||| |||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 26485126 caagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgttcag 26485067 Query: 879 aagatccttaaatttcgatctattaatgtggatcatcagcagcatagagcataccagcat 938 |||||||| |||||||| ||||| |||| ||||||| |||||| |||||| ||| | || Sbjct: 26485066 aagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacagggat 26485007 Query: 939 agggacagggaaatttgaaacaaaatctgtagctgtttttttcttct 985 | || || ||||||||||||| || |||||| |||||||| |||| Sbjct: 26485006 aatgagagagaaatttgaaacagaacttgtagc-gttttttttttct 26484961 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 575 ggaagaagaagagcatatcttgctagagttggatgattgtctttattccgacataccacc 634 |||||| |||||| || ||||||| ||||||||||||||||||||||||||| | | ||| Sbjct: 26488122 ggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaacc 26488063 Query: 635 aaatgctccatatgtactct 654 ||||||| ||||||| |||| Sbjct: 26488062 aaatgcttcatatgtgctct 26488043 >emb|AL662984.3|OSJN00183 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081C01, complete sequence Length = 140454 Score = 165 bits (83), Expect = 5e-37 Identities = 192/227 (84%), Gaps = 1/227 (0%) Strand = Plus / Minus Query: 759 gatgctccaccaaaacccattcgcgatgagatggcagcatctggagaaaataaggacaag 818 |||||||||||||||||||||| || |||||||||| | ||| |||||| ||||||||| Sbjct: 22073 gatgctccaccaaaacccattcacggtgagatggcacctcctgaagaaaacaaggacaag 22014 Query: 819 caagccagcagtagtaaggaatcaccatccaaggaggtgaaacatctggcaagcgttcac 878 ||||||||| |||| |||||| ||||| ||||||||||| ||||| ||||||||||| Sbjct: 22013 caagccagctgtagcaaggaagtgccatcaaaggaggtgaagcatctcgcaagcgttcag 21954 Query: 879 aagatccttaaatttcgatctattaatgtggatcatcagcagcatagagcataccagcat 938 |||||||| |||||||| ||||| |||| ||||||| |||||| |||||| ||| | || Sbjct: 21953 aagatcctcaaatttcgctctatcaatgcggatcatgagcagcgtagagcctacagggat 21894 Query: 939 agggacagggaaatttgaaacaaaatctgtagctgtttttttcttct 985 | || || ||||||||||||| || |||||| |||||||| |||| Sbjct: 21893 aatgagagagaaatttgaaacagaacttgtagc-gttttttttttct 21848 Score = 87.7 bits (44), Expect = 1e-13 Identities = 71/80 (88%) Strand = Plus / Minus Query: 575 ggaagaagaagagcatatcttgctagagttggatgattgtctttattccgacataccacc 634 |||||| |||||| || ||||||| ||||||||||||||||||||||||||| | | ||| Sbjct: 25009 ggaagaggaagagtatgtcttgcttgagttggatgattgtctttattccgacgtgcaacc 24950 Query: 635 aaatgctccatatgtactct 654 ||||||| ||||||| |||| Sbjct: 24949 aaatgcttcatatgtgctct 24930