BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125b08 (1328 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CT835698.1| Oryza sativa (indica cultivar-group) cDNA clone:... 167 1e-37 gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome... 167 1e-37 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 167 1e-37 ref|NM_001074123.1| Oryza sativa (japonica cultivar-group) Os11g... 163 2e-36 emb|CT832614.1| Oryza sativa (indica cultivar-group) cDNA clone:... 135 5e-28 >emb|CT835698.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN037L09, full insert sequence Length = 1361 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Plus Query: 34 caatgacgagccccatgctcgcgcgcaaggcgaagctcaagaaccacctcgtctccgtca 93 ||||| |||||||||||| |||||| | ||||||||| |||| ||| || || || | || Sbjct: 127 caatggcgagccccatgcacgcgcggagggcgaagctgaagagccagctggtgtcggcca 186 Query: 94 aggccaagctcaagcaccacgtcaccctccgccgcctcctcctcctcgccgccgcctccg 153 ||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| ||| Sbjct: 187 aggccaagctcaagcaccatgtcacgccgcgccgcctcctcctcctctccgccgccgccg 246 Query: 154 ccgcggccttcctcctcctcctcaccctccgcacgctctccgcc 197 || | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 247 cctccgccttcctcctcctcctcaccctccgcaccctctccgcc 290 Score = 151 bits (76), Expect = 9e-33 Identities = 162/189 (85%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 788 gatgggcgcgatatacactgccgggatggcggcgcgggcgcggcggccggggagcggcga 847 |||||||||||||||||| || | | |||||||||||||||||||||||| | |||| || Sbjct: 868 gatgggcgcgatatacaccgcggcggtggcggcgcgggcgcggcggccggcg-gcggaga 926 Query: 848 ----gacggacgtgatggtgcacgacgtggacagggcggtggaggacagcttctcgacgg 903 |||||||||| |||||||||||||||||| | ||||| ||||||| |||||||||| Sbjct: 927 cggagacggacgtggtggtgcacgacgtggacaagccggtgcaggacaggttctcgacgg 986 Query: 904 cgttcctgtgccaaggatacctcaatgaggaggtcggcaggctcaggcacttcgccatcc 963 ||||||||||| || |||||||| |||||||| |||| ||||||| |||||||||| Sbjct: 987 cgttcctgtgcggcggctacctcaaggaggaggttggcaacctcaggcgattcgccatcc 1046 Query: 964 caagccaca 972 | ||||||| Sbjct: 1047 ctagccaca 1055 Score = 135 bits (68), Expect = 5e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 653 gctctcgtcggaccacttcgagcgctcgccgtgcaagctcgccctgcgcgggctgccggc 712 ||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| || || || Sbjct: 733 gctctcgccgggccacttcgaccgctcgccgtgcaagctcgccgtgcgcggcctccccgc 792 Query: 713 ggcgttctacgaggcggagtgggacgtgatcatggtggacgcgc 756 ||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 793 ggcgttctacgaggcggagtgggacgtgatcgtggtcgacgcgc 836 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Plus Query: 396 gcgccctgcaatctcctcgtgttcgggctcggcctcgacagcgcgctctgggcggcgctc 455 ||||| ||||| || ||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 497 gcgccgtgcaacctgctcgtgttcgggctcggccacggcgccgcgctctgggcggcgctc 556 Query: 456 aaccacggcggccgcacgctcttcctcgaggaggacga 493 |||||||||||||||||| | ||||||||||||||||| Sbjct: 557 aaccacggcggccgcacggtgttcctcgaggaggacga 594 >gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Minus Query: 34 caatgacgagccccatgctcgcgcgcaaggcgaagctcaagaaccacctcgtctccgtca 93 ||||| |||||||||||| |||||| | ||||||||| |||| ||| || || || | || Sbjct: 30604 caatggcgagccccatgcacgcgcggagggcgaagctgaagagccagctggtgtcggcca 30545 Query: 94 aggccaagctcaagcaccacgtcaccctccgccgcctcctcctcctcgccgccgcctccg 153 ||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| ||| Sbjct: 30544 aggccaagctcaagcaccatgtcacgccgcgccgcctcctcctcctctccgccgccgccg 30485 Query: 154 ccgcggccttcctcctcctcctcaccctccgcacgctctccgcc 197 || | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 30484 cctccgccttcctcctcctcctcaccctccgcaccctctccgcc 30441 Score = 143 bits (72), Expect = 2e-30 Identities = 161/189 (85%), Gaps = 5/189 (2%) Strand = Plus / Minus Query: 788 gatgggcgcgatatacactgccgggatggcggcgcgggcgcggcggccggggagcggcga 847 |||||||||||||||||| || | | |||||||||||||||||||||||| | |||| || Sbjct: 29865 gatgggcgcgatatacaccgcggcggtggcggcgcgggcgcggcggccggcg-gcggaga 29807 Query: 848 ----gacggacgtgatggtgcacgacgtggacagggcggtggaggacagcttctcgacgg 903 |||||||||| |||||||||||||||||| | ||||| ||||||| |||||||||| Sbjct: 29806 cggagacggacgtggtggtgcacgacgtggacaagccggtgcaggacaggttctcgacgg 29747 Query: 904 cgttcctgtgccaaggatacctcaatgaggaggtcggcaggctcaggcacttcgccatcc 963 ||||||||||| || |||||||| |||| ||| |||| ||||||| |||||||||| Sbjct: 29746 cgttcctgtgcggcggctacctcaaggagggggttggcaacctcaggcgattcgccatcc 29687 Query: 964 caagccaca 972 | ||||||| Sbjct: 29686 ctagccaca 29678 Score = 135 bits (68), Expect = 5e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 653 gctctcgtcggaccacttcgagcgctcgccgtgcaagctcgccctgcgcgggctgccggc 712 ||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| || || || Sbjct: 30000 gctctcgccgggccacttcgaccgctcgccgtgcaagctcgccgtgcgcggcctccccgc 29941 Query: 713 ggcgttctacgaggcggagtgggacgtgatcatggtggacgcgc 756 ||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 29940 ggcgttctacgaggcggagtgggacgtgatcgtggtcgacgcgc 29897 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 396 gcgccctgcaatctcctcgtgttcgggctcggcctcgacagcgcgctctgggcggcgctc 455 ||||| ||||| || ||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 30236 gcgccgtgcaacctgctcgtgttcgggctcggccacggcgccgcgctctgggcggcgctc 30177 Query: 456 aaccacggcggccgcacgctcttcctcgaggaggacga 493 |||||||||||||||||| | ||||||||||||||||| Sbjct: 30176 aaccacggcggccgcacggtgttcctcgaggaggacga 30139 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 167 bits (84), Expect = 1e-37 Identities = 144/164 (87%) Strand = Plus / Minus Query: 34 caatgacgagccccatgctcgcgcgcaaggcgaagctcaagaaccacctcgtctccgtca 93 ||||| |||||||||||| |||||| | ||||||||| |||| ||| || || || | || Sbjct: 7571518 caatggcgagccccatgcacgcgcggagggcgaagctgaagagccagctggtgtcggcca 7571459 Query: 94 aggccaagctcaagcaccacgtcaccctccgccgcctcctcctcctcgccgccgcctccg 153 ||||||||||||||||||| ||||| | |||||||||||||||||| |||||||| ||| Sbjct: 7571458 aggccaagctcaagcaccatgtcacgccgcgccgcctcctcctcctctccgccgccgccg 7571399 Query: 154 ccgcggccttcctcctcctcctcaccctccgcacgctctccgcc 197 || | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 7571398 cctccgccttcctcctcctcctcaccctccgcaccctctccgcc 7571355 Score = 143 bits (72), Expect = 2e-30 Identities = 161/189 (85%), Gaps = 5/189 (2%) Strand = Plus / Minus Query: 788 gatgggcgcgatatacactgccgggatggcggcgcgggcgcggcggccggggagcggcga 847 |||||||||||||||||| || | | |||||||||||||||||||||||| | |||| || Sbjct: 7570779 gatgggcgcgatatacaccgcggcggtggcggcgcgggcgcggcggccggcg-gcggaga 7570721 Query: 848 ----gacggacgtgatggtgcacgacgtggacagggcggtggaggacagcttctcgacgg 903 |||||||||| |||||||||||||||||| | ||||| ||||||| |||||||||| Sbjct: 7570720 cggagacggacgtggtggtgcacgacgtggacaagccggtgcaggacaggttctcgacgg 7570661 Query: 904 cgttcctgtgccaaggatacctcaatgaggaggtcggcaggctcaggcacttcgccatcc 963 ||||||||||| || |||||||| |||| ||| |||| ||||||| |||||||||| Sbjct: 7570660 cgttcctgtgcggcggctacctcaaggagggggttggcaacctcaggcgattcgccatcc 7570601 Query: 964 caagccaca 972 | ||||||| Sbjct: 7570600 ctagccaca 7570592 Score = 135 bits (68), Expect = 5e-28 Identities = 95/104 (91%) Strand = Plus / Minus Query: 653 gctctcgtcggaccacttcgagcgctcgccgtgcaagctcgccctgcgcgggctgccggc 712 ||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| || || || Sbjct: 7570914 gctctcgccgggccacttcgaccgctcgccgtgcaagctcgccgtgcgcggcctccccgc 7570855 Query: 713 ggcgttctacgaggcggagtgggacgtgatcatggtggacgcgc 756 ||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 7570854 ggcgttctacgaggcggagtgggacgtgatcgtggtcgacgcgc 7570811 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Minus Query: 396 gcgccctgcaatctcctcgtgttcgggctcggcctcgacagcgcgctctgggcggcgctc 455 ||||| ||||| || ||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 7571150 gcgccgtgcaacctgctcgtgttcgggctcggccacggcgccgcgctctgggcggcgctc 7571091 Query: 456 aaccacggcggccgcacgctcttcctcgaggaggacga 493 |||||||||||||||||| | ||||||||||||||||| Sbjct: 7571090 aaccacggcggccgcacggtgttcctcgaggaggacga 7571053 >ref|NM_001074123.1| Oryza sativa (japonica cultivar-group) Os11g0242600 (Os11g0242600) mRNA, complete cds Length = 951 Score = 163 bits (82), Expect = 2e-36 Identities = 139/158 (87%) Strand = Plus / Plus Query: 40 cgagccccatgctcgcgcgcaaggcgaagctcaagaaccacctcgtctccgtcaaggcca 99 |||||||||||| |||||| | ||||||||| |||| ||| || || || | |||||||| Sbjct: 5 cgagccccatgcacgcgcggagggcgaagctgaagagccagctggtgtcggccaaggcca 64 Query: 100 agctcaagcaccacgtcaccctccgccgcctcctcctcctcgccgccgcctccgccgcgg 159 ||||||||||||| ||||| | |||||||||||||||||| |||||||| ||||| | | Sbjct: 65 agctcaagcaccatgtcacgccgcgccgcctcctcctcctctccgccgccgccgcctccg 124 Query: 160 ccttcctcctcctcctcaccctccgcacgctctccgcc 197 |||||||||||||||||||||||||||| ||||||||| Sbjct: 125 ccttcctcctcctcctcaccctccgcaccctctccgcc 162 Score = 143 bits (72), Expect = 2e-30 Identities = 161/189 (85%), Gaps = 5/189 (2%) Strand = Plus / Plus Query: 788 gatgggcgcgatatacactgccgggatggcggcgcgggcgcggcggccggggagcggcga 847 |||||||||||||||||| || | | |||||||||||||||||||||||| | |||| || Sbjct: 738 gatgggcgcgatatacaccgcggcggtggcggcgcgggcgcggcggccggcg-gcggaga 796 Query: 848 ----gacggacgtgatggtgcacgacgtggacagggcggtggaggacagcttctcgacgg 903 |||||||||| |||||||||||||||||| | ||||| ||||||| |||||||||| Sbjct: 797 cggagacggacgtggtggtgcacgacgtggacaagccggtgcaggacaggttctcgacgg 856 Query: 904 cgttcctgtgccaaggatacctcaatgaggaggtcggcaggctcaggcacttcgccatcc 963 ||||||||||| || |||||||| |||| ||| |||| ||||||| |||||||||| Sbjct: 857 cgttcctgtgcggcggctacctcaaggagggggttggcaacctcaggcgattcgccatcc 916 Query: 964 caagccaca 972 | ||||||| Sbjct: 917 ctagccaca 925 Score = 135 bits (68), Expect = 5e-28 Identities = 95/104 (91%) Strand = Plus / Plus Query: 653 gctctcgtcggaccacttcgagcgctcgccgtgcaagctcgccctgcgcgggctgccggc 712 ||||||| ||| ||||||||| ||||||||||||||||||||| ||||||| || || || Sbjct: 603 gctctcgccgggccacttcgaccgctcgccgtgcaagctcgccgtgcgcggcctccccgc 662 Query: 713 ggcgttctacgaggcggagtgggacgtgatcatggtggacgcgc 756 ||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 663 ggcgttctacgaggcggagtgggacgtgatcgtggtcgacgcgc 706 Score = 123 bits (62), Expect = 2e-24 Identities = 89/98 (90%) Strand = Plus / Plus Query: 396 gcgccctgcaatctcctcgtgttcgggctcggcctcgacagcgcgctctgggcggcgctc 455 ||||| ||||| || ||||||||||||||||||| || | ||||||||||||||||||| Sbjct: 367 gcgccgtgcaacctgctcgtgttcgggctcggccacggcgccgcgctctgggcggcgctc 426 Query: 456 aaccacggcggccgcacgctcttcctcgaggaggacga 493 |||||||||||||||||| | ||||||||||||||||| Sbjct: 427 aaccacggcggccgcacggtgttcctcgaggaggacga 464 >emb|CT832614.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113A04, full insert sequence Length = 1516 Score = 135 bits (68), Expect = 5e-28 Identities = 188/228 (82%) Strand = Plus / Plus Query: 279 tgcgggaagcttccggcgcccgtggtcgaggcgctggtccactacgcgatggccaacgcg 338 ||||||||||| |||||| | |||| ||||| |||| |||||||||| ||| |||| | Sbjct: 383 tgcgggaagctcccggcggcggtggcgcaggcgatggtgcactacgcgacggcgaacgtg 442 Query: 339 acgccgcagcagacggcggacgaggtcgcggtgaccgcgcgcgtgctggcgcgtcgcgcg 398 |||||||||||||| |||| ||| ||| |||| | ||| |||||| ||| || ||| Sbjct: 443 acgccgcagcagactgcggcggagatcggggtgtcgctgcgggtgctgcagcggcgggcg 502 Query: 399 ccctgcaatctcctcgtgttcgggctcggcctcgacagcgcgctctgggcggcgctcaac 458 || ||||| |||| |||||||| || |||||||||||||| | ||||||||||||||| Sbjct: 503 ccgtgcaacttcctggtgttcggcctgggcctcgacagcgccatgtgggcggcgctcaac 562 Query: 459 cacggcggccgcacgctcttcctcgaggaggacgatgcctggatcgcc 506 |||||||||||||| | |||||||||||||||| ||||||||||| Sbjct: 563 cacggcggccgcaccgtgttcctcgaggaggacgcgtcctggatcgcc 610 Score = 123 bits (62), Expect = 2e-24 Identities = 116/134 (86%) Strand = Plus / Plus Query: 690 ctcgccctgcgcgggctgccggcggcgttctacgaggcggagtgggacgtgatcatggtg 749 |||||||| |||||||| ||| ||| |||| |||||| |||||||||| | ||||||||| Sbjct: 761 ctcgccctccgcgggctcccgccggtgttccacgaggtggagtgggacctcatcatggtg 820 Query: 750 gacgcgccgacgggatgggtgccggaggcgcccgggaggatgggcgcgatatacactgcc 809 |||||||||||||| ||| ||||||| |||| ||||||||||| ||||| ||||| || Sbjct: 821 gacgcgccgacggggtggacgccggagtcgccggggaggatgggggcgatctacaccgcg 880 Query: 810 gggatggcggcgcg 823 || ||||||||||| Sbjct: 881 ggcatggcggcgcg 894