BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem125a15 (970 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066439.1| Oryza sativa (japonica cultivar-group) Os07g... 392 e-105 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 218 3e-53 dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic D... 218 3e-53 >ref|NM_001066439.1| Oryza sativa (japonica cultivar-group) Os07g0542900 (Os07g0542900) mRNA, complete cds Length = 966 Score = 392 bits (198), Expect = e-105 Identities = 368/424 (86%), Gaps = 3/424 (0%) Strand = Plus / Plus Query: 89 cgccgtaatggcggttgcggcgttggccacgacggcgttggcgaaggactacacggtggg 148 |||||| |||||||| |||||| ||||| |||||||| |||| |||||||||||||| || Sbjct: 399 cgccgtcatggcggtcgcggcggtggcctcgacggcggtggccaaggactacacggtcgg 458 Query: 149 cggctcctacgggtgggacacgtacgtcgactacgacaagtgggcggccggcaagacgtt 208 |||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 459 cggctcctacggctgggacacctacgtcgactacgacaagtgggccgccggaaagacgtt 518 Query: 209 gatggtcggcgacaccataacgttcaagtacgaaccgtaccacaacgtgctggaggtgac 268 || ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| | Sbjct: 519 catcgtcggcgacaccataacgttcaagtacgagccgtaccacaacgtggtggaggtgcc 578 Query: 269 g---gaggcgaactacgacagctgcaccgcggacagcgccatctccacccactccggcgg 325 | ||| || |||||||| ||||| | || || | || ||||| |||||||||||| Sbjct: 579 ggctgagacggactacgacggctgcgtctcgaccaaccccgtctccgtccactccggcgg 638 Query: 326 cgcaaccaccttcgagctcaccgccaccggcacccgctacttcatctgcggcatcccccg 385 | ||||||||||||||| ||||| ||||||| ||||||||||||||| ||||||| || Sbjct: 639 caacaccaccttcgagctcgccgccgccggcacgcgctacttcatctgcagcatcccgcg 698 Query: 386 ccactgcctcaacggcaccatgcacgtcaaggtcaccaccgtcccctactccgccgccgc 445 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || Sbjct: 699 ccactgcctcaacggcaccatgcacgtcaaggtcaccaccgtcccttactccgcctcggc 758 Query: 446 ggccgcagcagcagcagcctccgccggcccttcactggctccgcttacctcgcctcccgc 505 ||||| || || || || |||||||||||| | ||| ||||| ||||||||||||| Sbjct: 759 cgccgccgccgccgccgcggacgccggcccttccccggcgccgctcccctcgcctcccgc 818 Query: 506 cgac 509 |||| Sbjct: 819 cgac 822 Score = 77.8 bits (39), Expect = 7e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 613 agccggcggtggccgtagccgggctcgcggtggctgctctggtggccctggccgcctaa 671 |||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| Sbjct: 908 agccggcggtggccgtggccgggctggccttggctgctctggtggccatggccgcctaa 966 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 218 bits (110), Expect = 3e-53 Identities = 241/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 229 cgttcaagtacgaaccgtaccacaacgtgctggaggtgacgg---aggcgaactacgaca 285 ||||||||||||| ||||||||||||||| |||||||| ||| || || |||||||| Sbjct: 21412121 cgttcaagtacgagccgtaccacaacgtggtggaggtgccggctgagacggactacgacg 21412180 Query: 286 gctgcaccgcggacagcgccatctccacccactccggcggcgcaaccaccttcgagctca 345 ||||| | || || | || ||||| ||||||||||||| ||||||||||||||| Sbjct: 21412181 gctgcgtctcgaccaaccccgtctccgtccactccggcggcaacaccaccttcgagctcg 21412240 Query: 346 ccgccaccggcacccgctacttcatctgcggcatcccccgccactgcctcaacggcacca 405 ||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 21412241 ccgccgccggcacgcgctacttcatctgcagcatcccgcgccactgcctcaacggcacca 21412300 Query: 406 tgcacgtcaaggtcaccaccgtcccctactccgccgccgcggccgcagcagcagcagcct 465 ||||||||||||||||||||||||| ||||||||| | || ||||| || || || || Sbjct: 21412301 tgcacgtcaaggtcaccaccgtcccttactccgcctcggccgccgccgccgccgccgcgg 21412360 Query: 466 ccgccggcccttcactggctccgcttacctcgcctcccgccgac 509 |||||||||||| | ||| ||||| ||||||||||||||||| Sbjct: 21412361 acgccggcccttccccggcgccgctcccctcgcctcccgccgac 21412404 Score = 174 bits (88), Expect = 4e-40 Identities = 127/140 (90%) Strand = Plus / Plus Query: 89 cgccgtaatggcggttgcggcgttggccacgacggcgttggcgaaggactacacggtggg 148 |||||| |||||||| |||||| ||||| |||||||| |||| |||||||||||||| || Sbjct: 21411671 cgccgtcatggcggtcgcggcggtggcctcgacggcggtggccaaggactacacggtcgg 21411730 Query: 149 cggctcctacgggtgggacacgtacgtcgactacgacaagtgggcggccggcaagacgtt 208 |||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 21411731 cggctcctacggctgggacacctacgtcgactacgacaagtgggccgccggaaagacgtt 21411790 Query: 209 gatggtcggcgacaccataa 228 || |||||||||||||||| Sbjct: 21411791 catcgtcggcgacaccataa 21411810 Score = 77.8 bits (39), Expect = 7e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 613 agccggcggtggccgtagccgggctcgcggtggctgctctggtggccctggccgcctaa 671 |||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| Sbjct: 21412490 agccggcggtggccgtggccgggctggccttggctgctctggtggccatggccgcctaa 21412548 >dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 218 bits (110), Expect = 3e-53 Identities = 241/284 (84%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 229 cgttcaagtacgaaccgtaccacaacgtgctggaggtgacgg---aggcgaactacgaca 285 ||||||||||||| ||||||||||||||| |||||||| ||| || || |||||||| Sbjct: 56177 cgttcaagtacgagccgtaccacaacgtggtggaggtgccggctgagacggactacgacg 56236 Query: 286 gctgcaccgcggacagcgccatctccacccactccggcggcgcaaccaccttcgagctca 345 ||||| | || || | || ||||| ||||||||||||| ||||||||||||||| Sbjct: 56237 gctgcgtctcgaccaaccccgtctccgtccactccggcggcaacaccaccttcgagctcg 56296 Query: 346 ccgccaccggcacccgctacttcatctgcggcatcccccgccactgcctcaacggcacca 405 ||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 56297 ccgccgccggcacgcgctacttcatctgcagcatcccgcgccactgcctcaacggcacca 56356 Query: 406 tgcacgtcaaggtcaccaccgtcccctactccgccgccgcggccgcagcagcagcagcct 465 ||||||||||||||||||||||||| ||||||||| | || ||||| || || || || Sbjct: 56357 tgcacgtcaaggtcaccaccgtcccttactccgcctcggccgccgccgccgccgccgcgg 56416 Query: 466 ccgccggcccttcactggctccgcttacctcgcctcccgccgac 509 |||||||||||| | ||| ||||| ||||||||||||||||| Sbjct: 56417 acgccggcccttccccggcgccgctcccctcgcctcccgccgac 56460 Score = 174 bits (88), Expect = 4e-40 Identities = 127/140 (90%) Strand = Plus / Plus Query: 89 cgccgtaatggcggttgcggcgttggccacgacggcgttggcgaaggactacacggtggg 148 |||||| |||||||| |||||| ||||| |||||||| |||| |||||||||||||| || Sbjct: 55727 cgccgtcatggcggtcgcggcggtggcctcgacggcggtggccaaggactacacggtcgg 55786 Query: 149 cggctcctacgggtgggacacgtacgtcgactacgacaagtgggcggccggcaagacgtt 208 |||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||| Sbjct: 55787 cggctcctacggctgggacacctacgtcgactacgacaagtgggccgccggaaagacgtt 55846 Query: 209 gatggtcggcgacaccataa 228 || |||||||||||||||| Sbjct: 55847 catcgtcggcgacaccataa 55866 Score = 77.8 bits (39), Expect = 7e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 613 agccggcggtggccgtagccgggctcgcggtggctgctctggtggccctggccgcctaa 671 |||||||||||||||| |||||||| || ||||||||||||||||| ||||||||||| Sbjct: 56546 agccggcggtggccgtggccgggctggccttggctgctctggtggccatggccgcctaa 56604