BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem124m12 (928 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 315 2e-82 dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic D... 315 2e-82 emb|CT832402.1| Oryza sativa (indica cultivar-group) cDNA clone:... 303 7e-79 ref|NM_001049403.1| Oryza sativa (japonica cultivar-group) Os01g... 303 7e-79 dbj|AK111775.1| Oryza sativa (japonica cultivar-group) cDNA clon... 303 7e-79 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 315 bits (159), Expect = 2e-82 Identities = 201/215 (93%) Strand = Plus / Plus Query: 344 gtgcagcgccgcgcgcgaagcgggagcggaagaaccagtaccgcggcatccggcggcggc 403 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||| Sbjct: 11767110 gtgcagcgccgcgcgcgaagagggagcggaagaaccagtaccgcgggatcaggcagcggc 11767169 Query: 404 cgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcgtccgcgtctggctcg 463 |||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 11767170 cgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtctggctcg 11767229 Query: 464 gcaccttccccaccgccgaggccgccgcgcttgcctacgaccgcgcggcgcgccgcatca 523 |||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 11767230 gcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgcgccgcatca 11767289 Query: 524 ggggcgccaaggccaaggtcaacttccccaacgac 558 ||||||||||||| ||||||||||||||||||||| Sbjct: 11767290 ggggcgccaaggcgaaggtcaacttccccaacgac 11767324 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 151 atgtgcggcggtgccatcatccaggactacatcccggcgcgccgccgggtgtccgccgcc 210 |||||||||||||| |||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 11766919 atgtgcggcggtgcaatcatctacgactacatcccggcgcgccgccggttgtgcgcctcc 11766978 Query: 211 gacttctggcccgacgccgacgactccgacccccac 246 |||||||||||||||||||||||||||||||||||| Sbjct: 11766979 gacttctggcccgacgccgacgactccgacccccac 11767014 Score = 133 bits (67), Expect = 1e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 621 ctccgacgaggtgaaggagctgtccgaggagctgatggcgtacgagagctacatgaactt 680 |||||||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| Sbjct: 11767447 ctccgacgaggtcaaggagctgtccgaggagctgctcgcgtacgagaactacatgagctt 11767506 Query: 681 cctcggcatcccctacatggagggcgg 707 ||||||||||||||||||||||||||| Sbjct: 11767507 cctcggcatcccctacatggagggcgg 11767533 >dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 315 bits (159), Expect = 2e-82 Identities = 201/215 (93%) Strand = Plus / Plus Query: 344 gtgcagcgccgcgcgcgaagcgggagcggaagaaccagtaccgcggcatccggcggcggc 403 |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||| Sbjct: 106278 gtgcagcgccgcgcgcgaagagggagcggaagaaccagtaccgcgggatcaggcagcggc 106337 Query: 404 cgtgggggaagtgggcggcggagatccgcgaccccgtcaagggcgtccgcgtctggctcg 463 |||||||||||||||||||||||||||||||||| || ||||| || ||||||||||||| Sbjct: 106338 cgtgggggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtctggctcg 106397 Query: 464 gcaccttccccaccgccgaggccgccgcgcttgcctacgaccgcgcggcgcgccgcatca 523 |||||| ||| ||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 106398 gcacctacccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgcgccgcatca 106457 Query: 524 ggggcgccaaggccaaggtcaacttccccaacgac 558 ||||||||||||| ||||||||||||||||||||| Sbjct: 106458 ggggcgccaaggcgaaggtcaacttccccaacgac 106492 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 151 atgtgcggcggtgccatcatccaggactacatcccggcgcgccgccgggtgtccgccgcc 210 |||||||||||||| |||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 106087 atgtgcggcggtgcaatcatctacgactacatcccggcgcgccgccggttgtgcgcctcc 106146 Query: 211 gacttctggcccgacgccgacgactccgacccccac 246 |||||||||||||||||||||||||||||||||||| Sbjct: 106147 gacttctggcccgacgccgacgactccgacccccac 106182 Score = 133 bits (67), Expect = 1e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 621 ctccgacgaggtgaaggagctgtccgaggagctgatggcgtacgagagctacatgaactt 680 |||||||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| Sbjct: 106615 ctccgacgaggtcaaggagctgtccgaggagctgctcgcgtacgagaactacatgagctt 106674 Query: 681 cctcggcatcccctacatggagggcgg 707 ||||||||||||||||||||||||||| Sbjct: 106675 cctcggcatcccctacatggagggcgg 106701 >emb|CT832402.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA116K09, full insert sequence Length = 947 Score = 303 bits (153), Expect = 7e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 350 cgccgcgcgcgaagcgggagcggaagaaccagtaccgcggcatccggcggcggccgtggg 409 |||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 246 cgccgcgcgcgaagagggagcggaagaaccagtaccgcgggatcaggcagcggccgtggg 305 Query: 410 ggaagtgggcggcggagatccgcgaccccgtcaagggcgtccgcgtctggctcggcacct 469 |||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||| Sbjct: 306 ggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtctggctcggcacct 365 Query: 470 tccccaccgccgaggccgccgcgcttgcctacgaccgcgcggcgcgccgcatcaggggcg 529 ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 366 acccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgcgccgcatcaggggcg 425 Query: 530 ccaaggccaaggtcaacttccccaacgac 558 ||||||| ||||||||||||||||||||| Sbjct: 426 ccaaggcgaaggtcaacttccccaacgac 454 Score = 151 bits (76), Expect = 6e-33 Identities = 91/96 (94%) Strand = Plus / Plus Query: 151 atgtgcggcggtgccatcatccaggactacatcccggcgcgccgccgggtgtccgccgcc 210 |||||||||||||| |||||| | |||||||||||||||||||||||||||| |||| || Sbjct: 131 atgtgcggcggtgcaatcatctacgactacatcccggcgcgccgccgggtgtgcgcctcc 190 Query: 211 gacttctggcccgacgccgacgactccgacccccac 246 |||||||||||||||||||||||||||||||||||| Sbjct: 191 gacttctggcccgacgccgacgactccgacccccac 226 Score = 133 bits (67), Expect = 1e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 621 ctccgacgaggtgaaggagctgtccgaggagctgatggcgtacgagagctacatgaactt 680 |||||||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| Sbjct: 577 ctccgacgaggtcaaggagctgtccgaggagctgctcgcgtacgagaactacatgagctt 636 Query: 681 cctcggcatcccctacatggagggcgg 707 ||||||||||||||||||||||||||| Sbjct: 637 cctcggcatcccctacatggagggcgg 663 >ref|NM_001049403.1| Oryza sativa (japonica cultivar-group) Os01g0313300 (Os01g0313300) mRNA, complete cds Length = 908 Score = 303 bits (153), Expect = 7e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 350 cgccgcgcgcgaagcgggagcggaagaaccagtaccgcggcatccggcggcggccgtggg 409 |||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 246 cgccgcgcgcgaagagggagcggaagaaccagtaccgcgggatcaggcagcggccgtggg 305 Query: 410 ggaagtgggcggcggagatccgcgaccccgtcaagggcgtccgcgtctggctcggcacct 469 |||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||| Sbjct: 306 ggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtctggctcggcacct 365 Query: 470 tccccaccgccgaggccgccgcgcttgcctacgaccgcgcggcgcgccgcatcaggggcg 529 ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 366 acccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgcgccgcatcaggggcg 425 Query: 530 ccaaggccaaggtcaacttccccaacgac 558 ||||||| ||||||||||||||||||||| Sbjct: 426 ccaaggcgaaggtcaacttccccaacgac 454 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 151 atgtgcggcggtgccatcatccaggactacatcccggcgcgccgccgggtgtccgccgcc 210 |||||||||||||| |||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 131 atgtgcggcggtgcaatcatctacgactacatcccggcgcgccgccggttgtgcgcctcc 190 Query: 211 gacttctggcccgacgccgacgactccgacccccac 246 |||||||||||||||||||||||||||||||||||| Sbjct: 191 gacttctggcccgacgccgacgactccgacccccac 226 Score = 133 bits (67), Expect = 1e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 621 ctccgacgaggtgaaggagctgtccgaggagctgatggcgtacgagagctacatgaactt 680 |||||||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| Sbjct: 577 ctccgacgaggtcaaggagctgtccgaggagctgctcgcgtacgagaactacatgagctt 636 Query: 681 cctcggcatcccctacatggagggcgg 707 ||||||||||||||||||||||||||| Sbjct: 637 cctcggcatcccctacatggagggcgg 663 >dbj|AK111775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075G11, full insert sequence Length = 909 Score = 303 bits (153), Expect = 7e-79 Identities = 195/209 (93%) Strand = Plus / Plus Query: 350 cgccgcgcgcgaagcgggagcggaagaaccagtaccgcggcatccggcggcggccgtggg 409 |||||||||||||| ||||||||||||||||||||||||| ||| ||| ||||||||||| Sbjct: 247 cgccgcgcgcgaagagggagcggaagaaccagtaccgcgggatcaggcagcggccgtggg 306 Query: 410 ggaagtgggcggcggagatccgcgaccccgtcaagggcgtccgcgtctggctcggcacct 469 |||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||| Sbjct: 307 ggaagtgggcggcggagatccgcgacccggtgaagggggtgcgcgtctggctcggcacct 366 Query: 470 tccccaccgccgaggccgccgcgcttgcctacgaccgcgcggcgcgccgcatcaggggcg 529 ||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 367 acccgaccgccgaggccgccgcgcgggcctacgaccgcgccgcgcgccgcatcaggggcg 426 Query: 530 ccaaggccaaggtcaacttccccaacgac 558 ||||||| ||||||||||||||||||||| Sbjct: 427 ccaaggcgaaggtcaacttccccaacgac 455 Score = 143 bits (72), Expect = 1e-30 Identities = 90/96 (93%) Strand = Plus / Plus Query: 151 atgtgcggcggtgccatcatccaggactacatcccggcgcgccgccgggtgtccgccgcc 210 |||||||||||||| |||||| | |||||||||||||||||||||||| ||| |||| || Sbjct: 132 atgtgcggcggtgcaatcatctacgactacatcccggcgcgccgccggttgtgcgcctcc 191 Query: 211 gacttctggcccgacgccgacgactccgacccccac 246 |||||||||||||||||||||||||||||||||||| Sbjct: 192 gacttctggcccgacgccgacgactccgacccccac 227 Score = 133 bits (67), Expect = 1e-27 Identities = 82/87 (94%) Strand = Plus / Plus Query: 621 ctccgacgaggtgaaggagctgtccgaggagctgatggcgtacgagagctacatgaactt 680 |||||||||||| ||||||||||||||||||||| | |||||||||| |||||||| ||| Sbjct: 578 ctccgacgaggtcaaggagctgtccgaggagctgctcgcgtacgagaactacatgagctt 637 Query: 681 cctcggcatcccctacatggagggcgg 707 ||||||||||||||||||||||||||| Sbjct: 638 cctcggcatcccctacatggagggcgg 664