BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem124i21 (1232 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001058364.1| Oryza sativa (japonica cultivar-group) Os03g... 327 6e-86 dbj|AK068294.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 6e-86 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 163 2e-36 ref|NM_001065827.1| Oryza sativa (japonica cultivar-group) Os07g... 157 1e-34 >ref|NM_001058364.1| Oryza sativa (japonica cultivar-group) Os03g0837000 (Os03g0837000) mRNA, partial cds Length = 1871 Score = 327 bits (165), Expect = 6e-86 Identities = 285/325 (87%) Strand = Plus / Plus Query: 20 ggaacacccaacccagattccaatttatcatcatgaatcgtcgaaatacagaaaatctgg 79 |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 310 ggaacacccaacccagattccagtttattgtcatgaatcgtaaaaatacagaaaatctga 369 Query: 80 ttgaagatctcttgagagattttgaataccaggtacaagttccttacataatgtaccgca 139 |||||||||||| | | ||||||||| || |||||||| |||||||| ||||||| || Sbjct: 370 ccgaagatctcttggggggttttgaatatcaagtacaagtcccttacatcatgtaccaca 429 Query: 140 atgctgcagacgaaattaccggaatttggttctataatcctcaggaatgtgaagaagttg 199 |||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 430 atgctgcagacgaaatcacaggaatttggttctatgatcctcaggaatgtgaacaagttg 489 Query: 200 cacatcttttcagtaggatacataatgcattttctagggcgtccccaaaggcaaaggttt 259 | ||||||||||||||||||| || |||||||| |||| |||||||||||| ||||||| Sbjct: 490 gatatcttttcagtaggatacagaaggcattttccagggtgtccccaaaggccaaggttt 549 Query: 260 ctgcaactaaaagtgagtttgaagagccagaagtagcgcctgctgttccttcagctgaag 319 ||| |||| ||||||||| |||| |||| ||||||| ||||||||||||||| ||| | Sbjct: 550 ctgtaactgaaagtgagtatgaaaagccggaagtagtgcctgctgttccttcgaatgagg 609 Query: 320 atactctagaacagtcaacatcatc 344 |||||||| ||||| |||| ||||| Sbjct: 610 atactctaaaacagccaacgtcatc 634 >dbj|AK068294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013148J04, full insert sequence Length = 1873 Score = 327 bits (165), Expect = 6e-86 Identities = 285/325 (87%) Strand = Plus / Plus Query: 20 ggaacacccaacccagattccaatttatcatcatgaatcgtcgaaatacagaaaatctgg 79 |||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||| Sbjct: 312 ggaacacccaacccagattccagtttattgtcatgaatcgtaaaaatacagaaaatctga 371 Query: 80 ttgaagatctcttgagagattttgaataccaggtacaagttccttacataatgtaccgca 139 |||||||||||| | | ||||||||| || |||||||| |||||||| ||||||| || Sbjct: 372 ccgaagatctcttggggggttttgaatatcaagtacaagtcccttacatcatgtaccaca 431 Query: 140 atgctgcagacgaaattaccggaatttggttctataatcctcaggaatgtgaagaagttg 199 |||||||||||||||| || ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 432 atgctgcagacgaaatcacaggaatttggttctatgatcctcaggaatgtgaacaagttg 491 Query: 200 cacatcttttcagtaggatacataatgcattttctagggcgtccccaaaggcaaaggttt 259 | ||||||||||||||||||| || |||||||| |||| |||||||||||| ||||||| Sbjct: 492 gatatcttttcagtaggatacagaaggcattttccagggtgtccccaaaggccaaggttt 551 Query: 260 ctgcaactaaaagtgagtttgaagagccagaagtagcgcctgctgttccttcagctgaag 319 ||| |||| ||||||||| |||| |||| ||||||| ||||||||||||||| ||| | Sbjct: 552 ctgtaactgaaagtgagtatgaaaagccggaagtagtgcctgctgttccttcgaatgagg 611 Query: 320 atactctagaacagtcaacatcatc 344 |||||||| ||||| |||| ||||| Sbjct: 612 atactctaaaacagccaacgtcatc 636 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 163 bits (82), Expect = 2e-36 Identities = 133/150 (88%) Strand = Plus / Minus Query: 67 acagaaaatctggttgaagatctcttgagagattttgaataccaggtacaagttccttac 126 |||||||||||| |||||||||||| | | ||||||||| || |||||||| |||||| Sbjct: 34958370 acagaaaatctgaccgaagatctcttggggggttttgaatatcaagtacaagtcccttac 34958311 Query: 127 ataatgtaccgcaatgctgcagacgaaattaccggaatttggttctataatcctcaggaa 186 || ||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 34958310 atcatgtaccacaatgctgcagacgaaatcacaggaatttggttctatgatcctcaggaa 34958251 Query: 187 tgtgaagaagttgcacatcttttcagtagg 216 |||||| |||||| | |||||||||||||| Sbjct: 34958250 tgtgaacaagttggatatcttttcagtagg 34958221 >gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete sequence Length = 171376 Score = 163 bits (82), Expect = 2e-36 Identities = 133/150 (88%) Strand = Plus / Plus Query: 67 acagaaaatctggttgaagatctcttgagagattttgaataccaggtacaagttccttac 126 |||||||||||| |||||||||||| | | ||||||||| || |||||||| |||||| Sbjct: 147182 acagaaaatctgaccgaagatctcttggggggttttgaatatcaagtacaagtcccttac 147241 Query: 127 ataatgtaccgcaatgctgcagacgaaattaccggaatttggttctataatcctcaggaa 186 || ||||||| |||||||||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 147242 atcatgtaccacaatgctgcagacgaaatcacaggaatttggttctatgatcctcaggaa 147301 Query: 187 tgtgaagaagttgcacatcttttcagtagg 216 |||||| |||||| | |||||||||||||| Sbjct: 147302 tgtgaacaagttggatatcttttcagtagg 147331 >ref|NM_001065827.1| Oryza sativa (japonica cultivar-group) Os07g0249600 (Os07g0249600) mRNA, complete cds Length = 1636 Score = 157 bits (79), Expect = 1e-34 Identities = 184/219 (84%) Strand = Plus / Plus Query: 1 tcgctcttcgtcgtcaagaggaacacccaacccagattccaatttatcatcatgaatcgt 60 ||||||||||| ||||||||||| | || ||||||||||| ||| | ||||||||||| Sbjct: 417 tcgctcttcgttgtcaagaggaatgcgcagcccagattccagtttgttgtcatgaatcgt 476 Query: 61 cgaaatacagaaaatctggttgaagatctcttgagagattttgaataccaggtacaagtt 120 || |||||||| ||| | |||||||||||| || ||||||||||||| ||| | || ||| Sbjct: 477 cgtaatacagataatttagttgaagatctcctgggagattttgaatatcagcttcaggtt 536 Query: 121 ccttacataatgtaccgcaatgctgcagacgaaattaccggaatttggttctataatcct 180 || || |||||||| |||||||||||| | ||| ||| || |||||||| |||||| | Sbjct: 537 ccctatataatgtatcgcaatgctgcacaagaagttattggcatttggttttataattcc 596 Query: 181 caggaatgtgaagaagttgcacatcttttcagtaggata 219 |||||||| |||||||||||| ||||||| || |||||| Sbjct: 597 caggaatgcgaagaagttgcaaatctttttagcaggata 635