BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem124f11 (969 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CR855210.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 238 3e-59 ref|NM_001059868.1| Oryza sativa (japonica cultivar-group) Os04g... 238 3e-59 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 238 3e-59 dbj|AK065832.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 3e-59 emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 238 3e-59 >emb|CR855210.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0131L05, complete sequence Length = 88580 Score = 238 bits (120), Expect = 3e-59 Identities = 167/182 (91%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 479 acggcaacgtggccggcggcggcggcggggcggtgataccgccgcatgagctggcgtggc 538 ||||||| |||||||||| |||||||| || ||||||||||||| ||||||||||||| Sbjct: 22332 acggcaaggtggccggcgtcggcggcgtgg---tgataccgccgcacgagctggcgtggc 22276 Query: 539 gcagccgggccgcgtctctgtcggtgcatgaggggatcggcaggacgctcaaggggcgcg 598 || |||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 22275 gcggccgcgcggcgtcgctgtcggtgcacgaggggatcgggaggacgctcaaggggcgcg 22216 Query: 599 acctcagccgggtccgggacgcggtgtggaagaagaccggcttcgaggactgaccggaga 658 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 22215 acctcagccgggtccgggacgcggtctggaagaagaccggcttcgaggactgaccggcga 22156 Query: 659 gc 660 || Sbjct: 22155 gc 22154 Score = 182 bits (92), Expect = 2e-42 Identities = 209/248 (84%), Gaps = 15/248 (6%) Strand = Plus / Minus Query: 109 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtacagggtgttctcaccgtcc 168 ||||| ||||| |||||||||||||| ||||||||||| ||| || ||||| | |||||| Sbjct: 22687 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 22628 Query: 169 cggggcgcgtcggcgaggtgccccggcagccccgggggcgcggcggcggacgagttcgac 228 ||||||| |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 22627 aggggcgcagcggcgaggtgccccggaagccccgggg---------cggacgagttcgac 22577 Query: 229 gagtcggacgtgtggggctcgttcagcccggccggcgtggactccagccccgccgagcta 288 |||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| Sbjct: 22576 gagtcggacgtgtggggctcgtacggcgcggccggcgtggagtccagccccgccgagcta 22517 Query: 289 ---tcccgggcccgcccgatcccgtcgtccgcacgcgcaggccggaagaagccgctggat 345 |||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||| Sbjct: 22516 ggcgcccggggccgcgcgatcc---cgtccgcccgcgccggccggaaggccccgctggat 22460 Query: 346 cgggccgc 353 |||||||| Sbjct: 22459 cgggccgc 22452 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Minus Query: 377 ccgggtcgctgccggtgaacataccggactggcagaagatcctcggagtcgagtacacgg 436 |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| || Sbjct: 22452 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 22393 Query: 437 atcacca 443 ||||||| Sbjct: 22392 atcacca 22386 >ref|NM_001059868.1| Oryza sativa (japonica cultivar-group) Os04g0520700 (Os04g0520700) mRNA, complete cds Length = 1159 Score = 238 bits (120), Expect = 3e-59 Identities = 167/182 (91%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 479 acggcaacgtggccggcggcggcggcggggcggtgataccgccgcatgagctggcgtggc 538 ||||||| |||||||||| |||||||| || ||||||||||||| ||||||||||||| Sbjct: 579 acggcaaggtggccggcgtcggcggcgtgg---tgataccgccgcacgagctggcgtggc 635 Query: 539 gcagccgggccgcgtctctgtcggtgcatgaggggatcggcaggacgctcaaggggcgcg 598 || |||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 636 gcggccgcgcggcgtcgctgtcggtgcacgaggggatcgggaggacgctcaaggggcgcg 695 Query: 599 acctcagccgggtccgggacgcggtgtggaagaagaccggcttcgaggactgaccggaga 658 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 696 acctcagccgggtccgggacgcggtctggaagaagaccggcttcgaggactgaccggcga 755 Query: 659 gc 660 || Sbjct: 756 gc 757 Score = 182 bits (92), Expect = 2e-42 Identities = 209/248 (84%), Gaps = 15/248 (6%) Strand = Plus / Plus Query: 109 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtacagggtgttctcaccgtcc 168 ||||| ||||| |||||||||||||| ||||||||||| ||| || ||||| | |||||| Sbjct: 224 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 283 Query: 169 cggggcgcgtcggcgaggtgccccggcagccccgggggcgcggcggcggacgagttcgac 228 ||||||| |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 284 aggggcgcagcggcgaggtgccccggaagccccgggg---------cggacgagttcgac 334 Query: 229 gagtcggacgtgtggggctcgttcagcccggccggcgtggactccagccccgccgagcta 288 |||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| Sbjct: 335 gagtcggacgtgtggggctcgtacggcgcggccggcgtggagtccagccccgccgagcta 394 Query: 289 ---tcccgggcccgcccgatcccgtcgtccgcacgcgcaggccggaagaagccgctggat 345 |||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||| Sbjct: 395 ggcgcccggggccgcgcgatcc---cgtccgcccgcgccggccggaaggccccgctggat 451 Query: 346 cgggccgc 353 |||||||| Sbjct: 452 cgggccgc 459 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 377 ccgggtcgctgccggtgaacataccggactggcagaagatcctcggagtcgagtacacgg 436 |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| || Sbjct: 459 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 518 Query: 437 atcacca 443 ||||||| Sbjct: 519 atcacca 525 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 238 bits (120), Expect = 3e-59 Identities = 167/182 (91%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 479 acggcaacgtggccggcggcggcggcggggcggtgataccgccgcatgagctggcgtggc 538 ||||||| |||||||||| |||||||| || ||||||||||||| ||||||||||||| Sbjct: 26048727 acggcaaggtggccggcgtcggcggcgtgg---tgataccgccgcacgagctggcgtggc 26048671 Query: 539 gcagccgggccgcgtctctgtcggtgcatgaggggatcggcaggacgctcaaggggcgcg 598 || |||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 26048670 gcggccgcgcggcgtcgctgtcggtgcacgaggggatcgggaggacgctcaaggggcgcg 26048611 Query: 599 acctcagccgggtccgggacgcggtgtggaagaagaccggcttcgaggactgaccggaga 658 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 26048610 acctcagccgggtccgggacgcggtctggaagaagaccggcttcgaggactgaccggcga 26048551 Query: 659 gc 660 || Sbjct: 26048550 gc 26048549 Score = 182 bits (92), Expect = 2e-42 Identities = 209/248 (84%), Gaps = 15/248 (6%) Strand = Plus / Minus Query: 109 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtacagggtgttctcaccgtcc 168 ||||| ||||| |||||||||||||| ||||||||||| ||| || ||||| | |||||| Sbjct: 26049082 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 26049023 Query: 169 cggggcgcgtcggcgaggtgccccggcagccccgggggcgcggcggcggacgagttcgac 228 ||||||| |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 26049022 aggggcgcagcggcgaggtgccccggaagccccgggg---------cggacgagttcgac 26048972 Query: 229 gagtcggacgtgtggggctcgttcagcccggccggcgtggactccagccccgccgagcta 288 |||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| Sbjct: 26048971 gagtcggacgtgtggggctcgtacggcgcggccggcgtggagtccagccccgccgagcta 26048912 Query: 289 ---tcccgggcccgcccgatcccgtcgtccgcacgcgcaggccggaagaagccgctggat 345 |||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||| Sbjct: 26048911 ggcgcccggggccgcgcgatcc---cgtccgcccgcgccggccggaaggccccgctggat 26048855 Query: 346 cgggccgc 353 |||||||| Sbjct: 26048854 cgggccgc 26048847 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Minus Query: 377 ccgggtcgctgccggtgaacataccggactggcagaagatcctcggagtcgagtacacgg 436 |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| || Sbjct: 26048847 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 26048788 Query: 437 atcacca 443 ||||||| Sbjct: 26048787 atcacca 26048781 >dbj|AK065832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036A08, full insert sequence Length = 1160 Score = 238 bits (120), Expect = 3e-59 Identities = 167/182 (91%), Gaps = 3/182 (1%) Strand = Plus / Plus Query: 479 acggcaacgtggccggcggcggcggcggggcggtgataccgccgcatgagctggcgtggc 538 ||||||| |||||||||| |||||||| || ||||||||||||| ||||||||||||| Sbjct: 580 acggcaaggtggccggcgtcggcggcgtgg---tgataccgccgcacgagctggcgtggc 636 Query: 539 gcagccgggccgcgtctctgtcggtgcatgaggggatcggcaggacgctcaaggggcgcg 598 || |||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 637 gcggccgcgcggcgtcgctgtcggtgcacgaggggatcgggaggacgctcaaggggcgcg 696 Query: 599 acctcagccgggtccgggacgcggtgtggaagaagaccggcttcgaggactgaccggaga 658 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 697 acctcagccgggtccgggacgcggtctggaagaagaccggcttcgaggactgaccggcga 756 Query: 659 gc 660 || Sbjct: 757 gc 758 Score = 182 bits (92), Expect = 2e-42 Identities = 209/248 (84%), Gaps = 15/248 (6%) Strand = Plus / Plus Query: 109 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtacagggtgttctcaccgtcc 168 ||||| ||||| |||||||||||||| ||||||||||| ||| || ||||| | |||||| Sbjct: 225 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 284 Query: 169 cggggcgcgtcggcgaggtgccccggcagccccgggggcgcggcggcggacgagttcgac 228 ||||||| |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 285 aggggcgcagcggcgaggtgccccggaagccccgggg---------cggacgagttcgac 335 Query: 229 gagtcggacgtgtggggctcgttcagcccggccggcgtggactccagccccgccgagcta 288 |||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| Sbjct: 336 gagtcggacgtgtggggctcgtacggcgcggccggcgtggagtccagccccgccgagcta 395 Query: 289 ---tcccgggcccgcccgatcccgtcgtccgcacgcgcaggccggaagaagccgctggat 345 |||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||| Sbjct: 396 ggcgcccggggccgcgcgatcc---cgtccgcccgcgccggccggaaggccccgctggat 452 Query: 346 cgggccgc 353 |||||||| Sbjct: 453 cgggccgc 460 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Plus Query: 377 ccgggtcgctgccggtgaacataccggactggcagaagatcctcggagtcgagtacacgg 436 |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| || Sbjct: 460 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 519 Query: 437 atcacca 443 ||||||| Sbjct: 520 atcacca 526 >emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11, complete sequence Length = 163039 Score = 238 bits (120), Expect = 3e-59 Identities = 167/182 (91%), Gaps = 3/182 (1%) Strand = Plus / Minus Query: 479 acggcaacgtggccggcggcggcggcggggcggtgataccgccgcatgagctggcgtggc 538 ||||||| |||||||||| |||||||| || ||||||||||||| ||||||||||||| Sbjct: 83054 acggcaaggtggccggcgtcggcggcgtgg---tgataccgccgcacgagctggcgtggc 82998 Query: 539 gcagccgggccgcgtctctgtcggtgcatgaggggatcggcaggacgctcaaggggcgcg 598 || |||| || ||||| ||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 82997 gcggccgcgcggcgtcgctgtcggtgcacgaggggatcgggaggacgctcaaggggcgcg 82938 Query: 599 acctcagccgggtccgggacgcggtgtggaagaagaccggcttcgaggactgaccggaga 658 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || Sbjct: 82937 acctcagccgggtccgggacgcggtctggaagaagaccggcttcgaggactgaccggcga 82878 Query: 659 gc 660 || Sbjct: 82877 gc 82876 Score = 182 bits (92), Expect = 2e-42 Identities = 209/248 (84%), Gaps = 15/248 (6%) Strand = Plus / Minus Query: 109 atggccgggagtgcgaggtcggcggccgcgaagcacgcgtacagggtgttctcaccgtcc 168 ||||| ||||| |||||||||||||| ||||||||||| ||| || ||||| | |||||| Sbjct: 83409 atggctgggagcgcgaggtcggcggcagcgaagcacgcctaccggatgttcgcgccgtcc 83350 Query: 169 cggggcgcgtcggcgaggtgccccggcagccccgggggcgcggcggcggacgagttcgac 228 ||||||| |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 83349 aggggcgcagcggcgaggtgccccggaagccccgggg---------cggacgagttcgac 83299 Query: 229 gagtcggacgtgtggggctcgttcagcccggccggcgtggactccagccccgccgagcta 288 |||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| Sbjct: 83298 gagtcggacgtgtggggctcgtacggcgcggccggcgtggagtccagccccgccgagcta 83239 Query: 289 ---tcccgggcccgcccgatcccgtcgtccgcacgcgcaggccggaagaagccgctggat 345 |||||| |||| |||||| ||||||| ||||| ||||||||| ||||||||| Sbjct: 83238 ggcgcccggggccgcgcgatcc---cgtccgcccgcgccggccggaaggccccgctggat 83182 Query: 346 cgggccgc 353 |||||||| Sbjct: 83181 cgggccgc 83174 Score = 93.7 bits (47), Expect = 1e-15 Identities = 62/67 (92%) Strand = Plus / Minus Query: 377 ccgggtcgctgccggtgaacataccggactggcagaagatcctcggagtcgagtacacgg 436 |||| ||||||||||||||||||||||||||||||||||| || || |||||||||| || Sbjct: 83174 ccggctcgctgccggtgaacataccggactggcagaagattcttggggtcgagtacaggg 83115 Query: 437 atcacca 443 ||||||| Sbjct: 83114 atcacca 83108