BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem123j16
         (1312 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   121   8e-24
dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic D...   121   8e-24
emb|CT837870.1| Oryza sativa (indica cultivar-group) cDNA clone:...   109   3e-20
ref|NM_001048758.1| Oryza sativa (japonica cultivar-group) Os01g...   109   3e-20

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  121 bits (61), Expect = 8e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                           
Query: 630     tctcttttatcctgcaggactatgagtacatcggttttaacccagttgcatttgacattg 689
               ||||||||||||| |||||||| |||||     ||||||| || || |||||||||||||
Sbjct: 4395258 tctcttttatccttcaggactacgagtatgcgagttttaatcctgtggcatttgacattg 4395317

                                                                           
Query: 690     ctaatcacttctgtgagatggctgctgattatcatacggtgacaccgcatgtgttggact 749
               |||||||||||||||||||| |||||||||||||| | |  ||||| |||||| ||||||
Sbjct: 4395318 ctaatcacttctgtgagatgtctgctgattatcattcagccacacctcatgtgctggact 4395377

                                
Query: 750     ttacaaaacaccctggt 766
               | |||||| ||||||||
Sbjct: 4395378 tcacaaaataccctggt 4395394



 Score = 93.7 bits (47), Expect = 2e-15
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                           
Query: 995     tgtctccaggagcatgtgaacaaaaatatcgactttgagtacaaggagtatgcaaggcaa 1054
               |||||||||| |||||||||||| || |||||||| |||||| |||||||||||||||| 
Sbjct: 4395884 tgtctccaggggcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcag 4395943

                              
Query: 1055    cgcttcgatcagtac 1069
               || ||||||||||||
Sbjct: 4395944 cggttcgatcagtac 4395958



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                                 
Query: 863     tcttgcaagccatctcttttggggtctttggggaataatctcagtaagct 912
               ||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 4395749 tcttgcaagccatatcttctggggtctttggggaataatctcagtaagct 4395798


>dbj|AP002484.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0489A01
          Length = 137174

 Score =  121 bits (61), Expect = 8e-24
 Identities = 118/137 (86%)
 Strand = Plus / Plus

                                                                         
Query: 630   tctcttttatcctgcaggactatgagtacatcggttttaacccagttgcatttgacattg 689
             ||||||||||||| |||||||| |||||     ||||||| || || |||||||||||||
Sbjct: 55340 tctcttttatccttcaggactacgagtatgcgagttttaatcctgtggcatttgacattg 55399

                                                                         
Query: 690   ctaatcacttctgtgagatggctgctgattatcatacggtgacaccgcatgtgttggact 749
             |||||||||||||||||||| |||||||||||||| | |  ||||| |||||| ||||||
Sbjct: 55400 ctaatcacttctgtgagatgtctgctgattatcattcagccacacctcatgtgctggact 55459

                              
Query: 750   ttacaaaacaccctggt 766
             | |||||| ||||||||
Sbjct: 55460 tcacaaaataccctggt 55476



 Score = 93.7 bits (47), Expect = 2e-15
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                         
Query: 995   tgtctccaggagcatgtgaacaaaaatatcgactttgagtacaaggagtatgcaaggcaa 1054
             |||||||||| |||||||||||| || |||||||| |||||| |||||||||||||||| 
Sbjct: 55966 tgtctccaggggcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcag 56025

                            
Query: 1055  cgcttcgatcagtac 1069
             || ||||||||||||
Sbjct: 56026 cggttcgatcagtac 56040



 Score = 83.8 bits (42), Expect = 2e-12
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                               
Query: 863   tcttgcaagccatctcttttggggtctttggggaataatctcagtaagct 912
             ||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 55831 tcttgcaagccatatcttctggggtctttggggaataatctcagtaagct 55880


>emb|CT837870.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA205M08, full
            insert sequence
          Length = 2578

 Score =  109 bits (55), Expect = 3e-20
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                        
Query: 663  gttttaacccagttgcatttgacattgctaatcacttctgtgagatggctgctgattatc 722
            ||||||| || || ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2062 gttttaatcctgtggcatttgacattgctaatcacttctgtgagatgtctgctgattatc 2121

                                                       
Query: 723  atacggtgacaccgcatgtgttggactttacaaaacaccctgg 765
            || | |  ||||| |||||| ||||||| |||||| |||||||
Sbjct: 2122 attcagccacacctcatgtgctggacttcacaaaataccctgg 2164



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1006 gcatgtgaacaaaaatatcgactttgagtacaaggagtatgcaaggcaacgcttcgatca 1065
            |||||||||||| || |||||||| |||||| |||||||||||||||| || ||||||||
Sbjct: 2315 gcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcagcggttcgatca 2374

                
Query: 1066 gtac 1069
            ||||
Sbjct: 2375 gtac 2378


>ref|NM_001048758.1| Oryza sativa (japonica cultivar-group) Os01g0183000 (Os01g0183000)
           mRNA, complete cds
          Length = 1053

 Score =  109 bits (55), Expect = 3e-20
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 663 gttttaacccagttgcatttgacattgctaatcacttctgtgagatggctgctgattatc 722
           ||||||| || || ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 695 gttttaatcctgtggcatttgacattgctaatcacttctgtgagatgtctgctgattatc 754

                                                      
Query: 723 atacggtgacaccgcatgtgttggactttacaaaacaccctgg 765
           || | |  ||||| |||||| ||||||| |||||| |||||||
Sbjct: 755 attcagccacacctcatgtgctggacttcacaaaataccctgg 797



 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1006 gcatgtgaacaaaaatatcgactttgagtacaaggagtatgcaaggcaacgcttcgatca 1065
            |||||||||||| || |||||||| |||||| |||||||||||||||| || ||||||||
Sbjct: 948  gcatgtgaacaagaacatcgacttcgagtaccaggagtatgcaaggcagcggttcgatca 1007

                
Query: 1066 gtac 1069
            ||||
Sbjct: 1008 gtac 1011