BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem123h11 (1117 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057556.1| Oryza sativa (japonica cultivar-group) Os03g... 670 0.0 dbj|AK070474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 670 0.0 emb|CT832492.1| Oryza sativa (indica cultivar-group) cDNA clone:... 307 5e-80 gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 157 1e-34 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 1e-34 >ref|NM_001057556.1| Oryza sativa (japonica cultivar-group) Os03g0704100 (Os03g0704100) mRNA, complete cds Length = 1067 Score = 670 bits (338), Expect = 0.0 Identities = 547/616 (88%), Gaps = 3/616 (0%) Strand = Plus / Plus Query: 271 gtggagggcgggcgtgtcgtccttctccttcctgccgtcgttcttgacggggaacaagga 330 |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 226 gtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaagga 285 Query: 331 gaaggacgaca---agaaggccgagaggctcaaggaggagctcctcgcggccatcgcgcc 387 |||||| || ||||||| |||||||||||||| ||||||||||| ||||| ||| Sbjct: 286 gaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggcc 345 Query: 388 gctcgaccgcggttccgaggccacgccggaggaccaggagcgcgtcgagcggattgctca 447 |||||||||||| ||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 346 gctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgagaagattgttca 405 Query: 448 gcaactggaggaggtgaacccggtgaaggagccgctgaagtctgatttcctcaacgggaa 507 |||||||||||||||||||| ||||||||||| || ||||||||| |||||||||| || Sbjct: 406 gcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaa 465 Query: 508 atgggagcttctgtacactacctcaacatccatactgcaaccacagaggccaaagtttct 567 |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 466 atgggagcttctctacaccacctcagaatccatactgcaaccacagaggccaaagtttct 525 Query: 568 gagaccatatgggaagatttatcaagcaatcaatgccgacactttacgggctcaaaatat 627 ||| || | ||||| |||||| |||||||||||| | ||||||||| | || |||||||| Sbjct: 526 gaggccgtttgggacgatttaccaagcaatcaatactgacactttaagagcccaaaatat 585 Query: 628 ggagacatggccttattttaatcaagttactgccaacttgagacctctcaatcctagaag 687 |||||| ||||| ||||||||||| ||||||||||||||| |||||||||| ||||||| Sbjct: 586 ggagacgtggccctattttaatcaggttactgccaacttggtacctctcaattctagaag 645 Query: 688 agtggcagttagatttgattacttcaaaatatttagtttgatcccgatcaaatcacctgg 747 |||||||||| | |||||||||||||||||||||| |||||| | |||||| ||||||| Sbjct: 646 agtggcagttcggtttgattacttcaaaatatttaatttgatttcaatcaaagcacctgg 705 Query: 748 aggtggtaaaggtgaactagaaatcacatatcttgatgaagagctcagggtttcaagagg 807 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 706 cagtggtaaaggtgaactagaaattacatatcttgatgaagagctcagggcctcaagagg 765 Query: 808 cgataaggggaacttgttcatactgaagatggtcgacccaacatacagagttccgtcgta 867 |||||||||||| |||||||||||||| ||||| |||||||||||||||||||| | ||| Sbjct: 766 cgataaggggaatttgttcatactgaaaatggttgacccaacatacagagttccattgta 825 Query: 868 ataattgctaaatgct 883 |||||| ||||||||| Sbjct: 826 ataatttctaaatgct 841 >dbj|AK070474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052I15, full insert sequence Length = 1068 Score = 670 bits (338), Expect = 0.0 Identities = 547/616 (88%), Gaps = 3/616 (0%) Strand = Plus / Plus Query: 271 gtggagggcgggcgtgtcgtccttctccttcctgccgtcgttcttgacggggaacaagga 330 |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 227 gtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaagga 286 Query: 331 gaaggacgaca---agaaggccgagaggctcaaggaggagctcctcgcggccatcgcgcc 387 |||||| || ||||||| |||||||||||||| ||||||||||| ||||| ||| Sbjct: 287 gaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggcc 346 Query: 388 gctcgaccgcggttccgaggccacgccggaggaccaggagcgcgtcgagcggattgctca 447 |||||||||||| ||| |||||| |||||||| |||||||||||||| ||||| ||| Sbjct: 347 gctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgagaagattgttca 406 Query: 448 gcaactggaggaggtgaacccggtgaaggagccgctgaagtctgatttcctcaacgggaa 507 |||||||||||||||||||| ||||||||||| || ||||||||| |||||||||| || Sbjct: 407 gcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcctcaacggcaa 466 Query: 508 atgggagcttctgtacactacctcaacatccatactgcaaccacagaggccaaagtttct 567 |||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 467 atgggagcttctctacaccacctcagaatccatactgcaaccacagaggccaaagtttct 526 Query: 568 gagaccatatgggaagatttatcaagcaatcaatgccgacactttacgggctcaaaatat 627 ||| || | ||||| |||||| |||||||||||| | ||||||||| | || |||||||| Sbjct: 527 gaggccgtttgggacgatttaccaagcaatcaatactgacactttaagagcccaaaatat 586 Query: 628 ggagacatggccttattttaatcaagttactgccaacttgagacctctcaatcctagaag 687 |||||| ||||| ||||||||||| ||||||||||||||| |||||||||| ||||||| Sbjct: 587 ggagacgtggccctattttaatcaggttactgccaacttggtacctctcaattctagaag 646 Query: 688 agtggcagttagatttgattacttcaaaatatttagtttgatcccgatcaaatcacctgg 747 |||||||||| | |||||||||||||||||||||| |||||| | |||||| ||||||| Sbjct: 647 agtggcagttcggtttgattacttcaaaatatttaatttgatttcaatcaaagcacctgg 706 Query: 748 aggtggtaaaggtgaactagaaatcacatatcttgatgaagagctcagggtttcaagagg 807 |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 707 cagtggtaaaggtgaactagaaattacatatcttgatgaagagctcagggcctcaagagg 766 Query: 808 cgataaggggaacttgttcatactgaagatggtcgacccaacatacagagttccgtcgta 867 |||||||||||| |||||||||||||| ||||| |||||||||||||||||||| | ||| Sbjct: 767 cgataaggggaatttgttcatactgaaaatggttgacccaacatacagagttccattgta 826 Query: 868 ataattgctaaatgct 883 |||||| ||||||||| Sbjct: 827 ataatttctaaatgct 842 >emb|CT832492.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA020H12, full insert sequence Length = 424 Score = 307 bits (155), Expect = 5e-80 Identities = 221/243 (90%) Strand = Plus / Plus Query: 641 tattttaatcaagttactgccaacttgagacctctcaatcctagaagagtggcagttaga 700 ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||| | Sbjct: 3 tattttaatcaggttactgccaacttggtacctctcaattctagaagagtggcagttcgg 62 Query: 701 tttgattacttcaaaatatttagtttgatcccgatcaaatcacctggaggtggtaaaggt 760 |||||||||||||||||||||| |||||| | |||||| ||||||| ||||||||||| Sbjct: 63 tttgattacttcaaaatatttaatttgatttcaatcaaagcacctggcagtggtaaaggt 122 Query: 761 gaactagaaatcacatatcttgatgaagagctcagggtttcaagaggcgataaggggaac 820 ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 123 gaactagaaattacatatcttgatgaagagctcagggcctcaagaggcgataaggggaat 182 Query: 821 ttgttcatactgaagatggtcgacccaacatacagagttccgtcgtaataattgctaaat 880 |||||||||||||| ||||| |||||||||||||||||||| | ||||||||| |||||| Sbjct: 183 ttgttcatactgaaaatggttgacccaacatacagagttccattgtaataatttctaaat 242 Query: 881 gct 883 ||| Sbjct: 243 gct 245 >gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 157 bits (79), Expect = 1e-34 Identities = 147/169 (86%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 271 gtggagggcgggcgtgtcgtccttctccttcctgccgtcgttcttgacggggaacaagga 330 |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 14742 gtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaagga 14683 Query: 331 gaagg---acgacaagaaggccgagaggctcaaggaggagctcctcgcggccatcgcgcc 387 ||||| || | ||||||| |||||||||||||| ||||||||||| ||||| ||| Sbjct: 14682 gaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggcc 14623 Query: 388 gctcgaccgcggttccgaggccacgccggaggaccaggagcgcgtcgag 436 |||||||||||| ||| |||||| |||||||| |||||||||||||| Sbjct: 14622 gctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgag 14574 Score = 141 bits (71), Expect = 7e-30 Identities = 104/115 (90%) Strand = Plus / Minus Query: 439 gattgctcagcaactggaggaggtgaacccggtgaaggagccgctgaagtctgatttcct 498 ||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| |||| Sbjct: 14473 gattgttcagcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcct 14414 Query: 499 caacgggaaatgggagcttctgtacactacctcaacatccatactgcaaccacag 553 |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 14413 caacggcaaatgggagcttctctacaccacctcagaatccatactgcaaccacag 14359 Score = 119 bits (60), Expect = 3e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 800 tcaagaggcgataaggggaacttgttcatactgaagatggtcgacccaacatacagagtt 859 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 12331 tcaagaggcgataaggggaatttgttcatactgaaaatggttgacccaacatacagagtt 12272 Query: 860 ccgtcgtaataattgctaaatgct 883 || | ||||||||| ||||||||| Sbjct: 12271 ccattgtaataatttctaaatgct 12248 Score = 105 bits (53), Expect = 4e-19 Identities = 89/101 (88%) Strand = Plus / Minus Query: 551 cagaggccaaagtttctgagaccatatgggaagatttatcaagcaatcaatgccgacact 610 |||||||||||||||||||| || | ||||| |||||| |||||||||||| | |||||| Sbjct: 14222 cagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacact 14163 Query: 611 ttacgggctcaaaatatggagacatggccttattttaatca 651 ||| | || |||||||||||||| ||||| ||||||||||| Sbjct: 14162 ttaagagcccaaaatatggagacgtggccctattttaatca 14122 Score = 101 bits (51), Expect = 6e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 653 gttactgccaacttgagacctctcaatcctagaagagtggcagttagatttgattacttc 712 ||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 13550 gttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattacttc 13491 Query: 713 aaaatatttagtttg 727 |||||||||| |||| Sbjct: 13490 aaaatatttaatttg 13476 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 734 atcaaatcacctggaggtggtaaaggtgaactagaaatcacatatcttgatgaagagctc 793 |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 13033 atcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagctc 12974 Query: 794 agg 796 ||| Sbjct: 12973 agg 12971 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 157 bits (79), Expect = 1e-34 Identities = 147/169 (86%), Gaps = 3/169 (1%) Strand = Plus / Plus Query: 271 gtggagggcgggcgtgtcgtccttctccttcctgccgtcgttcttgacggggaacaagga 330 |||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||| Sbjct: 28101608 gtggagggcgggcgtgtcgtccttctccttcctggcgccgttcttcgcggggaacaagga 28101667 Query: 331 gaagg---acgacaagaaggccgagaggctcaaggaggagctcctcgcggccatcgcgcc 387 ||||| || | ||||||| |||||||||||||| ||||||||||| ||||| ||| Sbjct: 28101668 gaaggagaaccgcgagaaggcggagaggctcaaggaagagctcctcgccaccatcaggcc 28101727 Query: 388 gctcgaccgcggttccgaggccacgccggaggaccaggagcgcgtcgag 436 |||||||||||| ||| |||||| |||||||| |||||||||||||| Sbjct: 28101728 gctcgaccgcggcgtcgacgccacggcggaggacaaggagcgcgtcgag 28101776 Score = 141 bits (71), Expect = 7e-30 Identities = 104/115 (90%) Strand = Plus / Plus Query: 439 gattgctcagcaactggaggaggtgaacccggtgaaggagccgctgaagtctgatttcct 498 ||||| ||||||||||||||||||||||| ||||||||||| || ||||||||| |||| Sbjct: 28101877 gattgttcagcaactggaggaggtgaaccaagtgaaggagccactcaagtctgatctcct 28101936 Query: 499 caacgggaaatgggagcttctgtacactacctcaacatccatactgcaaccacag 553 |||||| |||||||||||||| ||||| |||||| ||||||||||||||||||| Sbjct: 28101937 caacggcaaatgggagcttctctacaccacctcagaatccatactgcaaccacag 28101991 Score = 119 bits (60), Expect = 3e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 800 tcaagaggcgataaggggaacttgttcatactgaagatggtcgacccaacatacagagtt 859 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 28104019 tcaagaggcgataaggggaatttgttcatactgaaaatggttgacccaacatacagagtt 28104078 Query: 860 ccgtcgtaataattgctaaatgct 883 || | ||||||||| ||||||||| Sbjct: 28104079 ccattgtaataatttctaaatgct 28104102 Score = 105 bits (53), Expect = 4e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 551 cagaggccaaagtttctgagaccatatgggaagatttatcaagcaatcaatgccgacact 610 |||||||||||||||||||| || | ||||| |||||| |||||||||||| | |||||| Sbjct: 28102128 cagaggccaaagtttctgaggccgtttgggacgatttaccaagcaatcaatactgacact 28102187 Query: 611 ttacgggctcaaaatatggagacatggccttattttaatca 651 ||| | || |||||||||||||| ||||| ||||||||||| Sbjct: 28102188 ttaagagcccaaaatatggagacgtggccctattttaatca 28102228 Score = 101 bits (51), Expect = 6e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 653 gttactgccaacttgagacctctcaatcctagaagagtggcagttagatttgattacttc 712 ||||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 28102800 gttactgccaacttggtacctctcaattctagaagagtggcagttcggtttgattacttc 28102859 Query: 713 aaaatatttagtttg 727 |||||||||| |||| Sbjct: 28102860 aaaatatttaatttg 28102874 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 734 atcaaatcacctggaggtggtaaaggtgaactagaaatcacatatcttgatgaagagctc 793 |||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 28103317 atcaaagcacctggcagtggtaaaggtgaactagaaattacatatcttgatgaagagctc 28103376 Query: 794 agg 796 ||| Sbjct: 28103377 agg 28103379