BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem123f14 (1384 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001056834.1| Oryza sativa (japonica cultivar-group) Os03g... 763 0.0 dbj|AK103513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 763 0.0 gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome... 293 1e-75 gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 293 1e-75 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 293 1e-75 >ref|NM_001056834.1| Oryza sativa (japonica cultivar-group) Os03g0396900 (Os03g0396900) mRNA, complete cds Length = 2635 Score = 763 bits (385), Expect = 0.0 Identities = 622/701 (88%) Strand = Plus / Plus Query: 228 accaaaaagaaaaagagagtaaggagatctcaatcgtatcattcataccaagattttgca 287 |||||||||||||||||||||||||||||| | || |||||||||| ||||| || ||| Sbjct: 1445 accaaaaagaaaaagagagtaaggagatctaagtcatatcattcatgtcaagacttggca 1504 Query: 288 gggaacatctccaatgacatcgccaagtactgggctcagcggtactcacttttctccctt 347 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1505 gggaacatctccaatgacattgccaagtactgggctcagcggtattcacttttctccctt 1564 Query: 348 tatgatagtggtataaagatggatgaagaagggtggttttcagtcacgccagagcccatc 407 | ||||||||||||||| |||||||||||||| ||||||||||| || ||||||| |||| Sbjct: 1565 tttgatagtggtataaaaatggatgaagaaggatggttttcagtgacaccagagctcatc 1624 Query: 408 gcaaagcatcatgcatctcgtgtcggtgggggtgtagtgattgactgtttcacaggagtt 467 |||||||||||||||||||| || |||| || | |||||||||||||||||||||||| Sbjct: 1625 gcaaagcatcatgcatctcgcgttggtgccggcattgtgattgactgtttcacaggagtt 1684 Query: 468 ggcggaaatgccatccagtttgccacaaagtgcaagcatgttattgcagttgatattgac 527 ||||||||||||||||| ||||||| ||||||| ||||||||| || |||||||||| Sbjct: 1685 ggcggaaatgccatccattttgccaacaagtgcaggcatgttatcgctattgatattgat 1744 Query: 528 ccacaaaagatcgattgtgcacagcataatgcaactatttatggagtaaatgacaatata 587 || |||||||| ||||| || ||||||||||||||| | ||||||||| |||| ||||| Sbjct: 1745 ccccaaaagattgattgcgcgcagcataatgcaactgtctatggagtacatgatcatata 1804 Query: 588 gacttcgttgtaggcaattttattcatatagcgcctcatctgaagggagaaactgctttc 647 ||||||||| ||| ||||||||||| | ||||||| ||||||||||||||||| ||| Sbjct: 1805 gacttcgttagaggtgattttattcatgtggcgcctcgtctgaagggagaaactgttttt 1864 Query: 648 atgtcgcctccttggggtggaccagactatgccaaagtagatgtttatgatatcaaagcc 707 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 1865 atgtcgcctccttggggtggaccagactatgccaaagtagatgtatatgatatcaaaacc 1924 Query: 708 atgcttaagccttgtgatgggtactctctctttaaacttgctatggtgatggcttcaaga 767 ||||||||||||||||||||||| |||||||||||||||| || || ||||| || Sbjct: 1925 atgcttaagccttgtgatgggtattctctctttaaacttggtacatcaatcgcttcgagg 1984 Query: 768 gtagtgatgtttcttcctcgcaacattgacctaaaccaattggcagacatgtgcttgtca 827 || ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||| Sbjct: 1985 gtggtgatgtttcttcctcgtaacattgaccaaaatcaattggcagacatgtgcctgtca 2044 Query: 828 gtcgatcctccatgggcggttgaggtagagaggaactttctcaatggaaagctgaaagcc 887 || |||||||| ||||| ||||||||||||| ||| || |||||||| |||||||||||| Sbjct: 2045 gttgatcctccttgggcagttgaggtagagaagaatttcctcaatgggaagctgaaagcc 2104 Query: 888 ataacagcatacttcgaagaacaggacggttcagacgtgca 928 ||||||||||| || || | ||||| |||||||| ||||| Sbjct: 2105 ataacagcatattttgagcagcaggatggttcagatgtgca 2145 >dbj|AK103513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131G05, full insert sequence Length = 2636 Score = 763 bits (385), Expect = 0.0 Identities = 622/701 (88%) Strand = Plus / Plus Query: 228 accaaaaagaaaaagagagtaaggagatctcaatcgtatcattcataccaagattttgca 287 |||||||||||||||||||||||||||||| | || |||||||||| ||||| || ||| Sbjct: 1446 accaaaaagaaaaagagagtaaggagatctaagtcatatcattcatgtcaagacttggca 1505 Query: 288 gggaacatctccaatgacatcgccaagtactgggctcagcggtactcacttttctccctt 347 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1506 gggaacatctccaatgacattgccaagtactgggctcagcggtattcacttttctccctt 1565 Query: 348 tatgatagtggtataaagatggatgaagaagggtggttttcagtcacgccagagcccatc 407 | ||||||||||||||| |||||||||||||| ||||||||||| || ||||||| |||| Sbjct: 1566 tttgatagtggtataaaaatggatgaagaaggatggttttcagtgacaccagagctcatc 1625 Query: 408 gcaaagcatcatgcatctcgtgtcggtgggggtgtagtgattgactgtttcacaggagtt 467 |||||||||||||||||||| || |||| || | |||||||||||||||||||||||| Sbjct: 1626 gcaaagcatcatgcatctcgcgttggtgccggcattgtgattgactgtttcacaggagtt 1685 Query: 468 ggcggaaatgccatccagtttgccacaaagtgcaagcatgttattgcagttgatattgac 527 ||||||||||||||||| ||||||| ||||||| ||||||||| || |||||||||| Sbjct: 1686 ggcggaaatgccatccattttgccaacaagtgcaggcatgttatcgctattgatattgat 1745 Query: 528 ccacaaaagatcgattgtgcacagcataatgcaactatttatggagtaaatgacaatata 587 || |||||||| ||||| || ||||||||||||||| | ||||||||| |||| ||||| Sbjct: 1746 ccccaaaagattgattgcgcgcagcataatgcaactgtctatggagtacatgatcatata 1805 Query: 588 gacttcgttgtaggcaattttattcatatagcgcctcatctgaagggagaaactgctttc 647 ||||||||| ||| ||||||||||| | ||||||| ||||||||||||||||| ||| Sbjct: 1806 gacttcgttagaggtgattttattcatgtggcgcctcgtctgaagggagaaactgttttt 1865 Query: 648 atgtcgcctccttggggtggaccagactatgccaaagtagatgtttatgatatcaaagcc 707 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 1866 atgtcgcctccttggggtggaccagactatgccaaagtagatgtatatgatatcaaaacc 1925 Query: 708 atgcttaagccttgtgatgggtactctctctttaaacttgctatggtgatggcttcaaga 767 ||||||||||||||||||||||| |||||||||||||||| || || ||||| || Sbjct: 1926 atgcttaagccttgtgatgggtattctctctttaaacttggtacatcaatcgcttcgagg 1985 Query: 768 gtagtgatgtttcttcctcgcaacattgacctaaaccaattggcagacatgtgcttgtca 827 || ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||| Sbjct: 1986 gtggtgatgtttcttcctcgtaacattgaccaaaatcaattggcagacatgtgcctgtca 2045 Query: 828 gtcgatcctccatgggcggttgaggtagagaggaactttctcaatggaaagctgaaagcc 887 || |||||||| ||||| ||||||||||||| ||| || |||||||| |||||||||||| Sbjct: 2046 gttgatcctccttgggcagttgaggtagagaagaatttcctcaatgggaagctgaaagcc 2105 Query: 888 ataacagcatacttcgaagaacaggacggttcagacgtgca 928 ||||||||||| || || | ||||| |||||||| ||||| Sbjct: 2106 ataacagcatattttgagcagcaggatggttcagatgtgca 2146 >gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 293 bits (148), Expect = 1e-75 Identities = 208/228 (91%) Strand = Plus / Minus Query: 265 atcattcataccaagattttgcagggaacatctccaatgacatcgccaagtactgggctc 324 ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 169302 atcattcatgtcaagacttggcagggaacatctccaatgacattgccaagtactgggctc 169243 Query: 325 agcggtactcacttttctccctttatgatagtggtataaagatggatgaagaagggtggt 384 ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||| Sbjct: 169242 agcggtattcacttttctccctttttgatagtggtataaaaatggatgaagaaggatggt 169183 Query: 385 tttcagtcacgccagagcccatcgcaaagcatcatgcatctcgtgtcggtgggggtgtag 444 ||||||| || ||||||| |||||||||||||||||||||||| || |||| || | | Sbjct: 169182 tttcagtgacaccagagctcatcgcaaagcatcatgcatctcgcgttggtgccggcattg 169123 Query: 445 tgattgactgtttcacaggagttggcggaaatgccatccagtttgcca 492 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 169122 tgattgactgtttcacaggagttggcggaaatgccatccattttgcca 169075 Score = 165 bits (83), Expect = 6e-37 Identities = 95/99 (95%) Strand = Plus / Minus Query: 631 agggagaaactgctttcatgtcgcctccttggggtggaccagactatgccaaagtagatg 690 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167745 agggagaaactgtttttatgtcgcctccttggggtggaccagactatgccaaagtagatg 167686 Query: 691 tttatgatatcaaagccatgcttaagccttgtgatgggt 729 | |||||||||||| |||||||||||||||||||||||| Sbjct: 167685 tatatgatatcaaaaccatgcttaagccttgtgatgggt 167647 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 771 gtgatgtttcttcctcgcaacattgacctaaaccaattggcagacatgtgcttgtcagtc 830 ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 167527 gtgatgtttcttcctcgtaacattgaccaaaatcaattggcagacatgtgcctgtcagtt 167468 Query: 831 gatcctccatgggcggttgaggta 854 |||||||| ||||| ||||||||| Sbjct: 167467 gatcctccttgggcagttgaggta 167444 Score = 105 bits (53), Expect = 5e-19 Identities = 116/137 (84%) Strand = Plus / Minus Query: 497 gtgcaagcatgttattgcagttgatattgacccacaaaagatcgattgtgcacagcataa 556 ||||| ||||||||| || |||||||||| || |||||||| ||||| || |||||||| Sbjct: 168748 gtgcaggcatgttatcgctattgatattgatccccaaaagattgattgcgcgcagcataa 168689 Query: 557 tgcaactatttatggagtaaatgacaatatagacttcgttgtaggcaattttattcatat 616 ||||||| | ||||||||| |||| |||||||||||||| ||| ||||||||||| | Sbjct: 168688 tgcaactgtctatggagtacatgatcatatagacttcgttagaggtgattttattcatgt 168629 Query: 617 agcgcctcatctgaagg 633 ||||||| |||||||| Sbjct: 168628 ggcgcctcgtctgaagg 168612 >gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0004M10, complete sequence Length = 152423 Score = 293 bits (148), Expect = 1e-75 Identities = 208/228 (91%) Strand = Plus / Plus Query: 265 atcattcataccaagattttgcagggaacatctccaatgacatcgccaagtactgggctc 324 ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 142915 atcattcatgtcaagacttggcagggaacatctccaatgacattgccaagtactgggctc 142974 Query: 325 agcggtactcacttttctccctttatgatagtggtataaagatggatgaagaagggtggt 384 ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||| Sbjct: 142975 agcggtattcacttttctccctttttgatagtggtataaaaatggatgaagaaggatggt 143034 Query: 385 tttcagtcacgccagagcccatcgcaaagcatcatgcatctcgtgtcggtgggggtgtag 444 ||||||| || ||||||| |||||||||||||||||||||||| || |||| || | | Sbjct: 143035 tttcagtgacaccagagctcatcgcaaagcatcatgcatctcgcgttggtgccggcattg 143094 Query: 445 tgattgactgtttcacaggagttggcggaaatgccatccagtttgcca 492 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 143095 tgattgactgtttcacaggagttggcggaaatgccatccattttgcca 143142 Score = 165 bits (83), Expect = 6e-37 Identities = 95/99 (95%) Strand = Plus / Plus Query: 631 agggagaaactgctttcatgtcgcctccttggggtggaccagactatgccaaagtagatg 690 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144472 agggagaaactgtttttatgtcgcctccttggggtggaccagactatgccaaagtagatg 144531 Query: 691 tttatgatatcaaagccatgcttaagccttgtgatgggt 729 | |||||||||||| |||||||||||||||||||||||| Sbjct: 144532 tatatgatatcaaaaccatgcttaagccttgtgatgggt 144570 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 771 gtgatgtttcttcctcgcaacattgacctaaaccaattggcagacatgtgcttgtcagtc 830 ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 144690 gtgatgtttcttcctcgtaacattgaccaaaatcaattggcagacatgtgcctgtcagtt 144749 Query: 831 gatcctccatgggcggttgaggta 854 |||||||| ||||| ||||||||| Sbjct: 144750 gatcctccttgggcagttgaggta 144773 Score = 105 bits (53), Expect = 5e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 497 gtgcaagcatgttattgcagttgatattgacccacaaaagatcgattgtgcacagcataa 556 ||||| ||||||||| || |||||||||| || |||||||| ||||| || |||||||| Sbjct: 143469 gtgcaggcatgttatcgctattgatattgatccccaaaagattgattgcgcgcagcataa 143528 Query: 557 tgcaactatttatggagtaaatgacaatatagacttcgttgtaggcaattttattcatat 616 ||||||| | ||||||||| |||| |||||||||||||| ||| ||||||||||| | Sbjct: 143529 tgcaactgtctatggagtacatgatcatatagacttcgttagaggtgattttattcatgt 143588 Query: 617 agcgcctcatctgaagg 633 ||||||| |||||||| Sbjct: 143589 ggcgcctcgtctgaagg 143605 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 293 bits (148), Expect = 1e-75 Identities = 208/228 (91%) Strand = Plus / Plus Query: 265 atcattcataccaagattttgcagggaacatctccaatgacatcgccaagtactgggctc 324 ||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct: 15875649 atcattcatgtcaagacttggcagggaacatctccaatgacattgccaagtactgggctc 15875708 Query: 325 agcggtactcacttttctccctttatgatagtggtataaagatggatgaagaagggtggt 384 ||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| |||| Sbjct: 15875709 agcggtattcacttttctccctttttgatagtggtataaaaatggatgaagaaggatggt 15875768 Query: 385 tttcagtcacgccagagcccatcgcaaagcatcatgcatctcgtgtcggtgggggtgtag 444 ||||||| || ||||||| |||||||||||||||||||||||| || |||| || | | Sbjct: 15875769 tttcagtgacaccagagctcatcgcaaagcatcatgcatctcgcgttggtgccggcattg 15875828 Query: 445 tgattgactgtttcacaggagttggcggaaatgccatccagtttgcca 492 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 15875829 tgattgactgtttcacaggagttggcggaaatgccatccattttgcca 15875876 Score = 165 bits (83), Expect = 6e-37 Identities = 95/99 (95%) Strand = Plus / Plus Query: 631 agggagaaactgctttcatgtcgcctccttggggtggaccagactatgccaaagtagatg 690 |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15877206 agggagaaactgtttttatgtcgcctccttggggtggaccagactatgccaaagtagatg 15877265 Query: 691 tttatgatatcaaagccatgcttaagccttgtgatgggt 729 | |||||||||||| |||||||||||||||||||||||| Sbjct: 15877266 tatatgatatcaaaaccatgcttaagccttgtgatgggt 15877304 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Plus Query: 771 gtgatgtttcttcctcgcaacattgacctaaaccaattggcagacatgtgcttgtcagtc 830 ||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||||||| Sbjct: 15877424 gtgatgtttcttcctcgtaacattgaccaaaatcaattggcagacatgtgcctgtcagtt 15877483 Query: 831 gatcctccatgggcggttgaggta 854 |||||||| ||||| ||||||||| Sbjct: 15877484 gatcctccttgggcagttgaggta 15877507 Score = 105 bits (53), Expect = 5e-19 Identities = 116/137 (84%) Strand = Plus / Plus Query: 497 gtgcaagcatgttattgcagttgatattgacccacaaaagatcgattgtgcacagcataa 556 ||||| ||||||||| || |||||||||| || |||||||| ||||| || |||||||| Sbjct: 15876203 gtgcaggcatgttatcgctattgatattgatccccaaaagattgattgcgcgcagcataa 15876262 Query: 557 tgcaactatttatggagtaaatgacaatatagacttcgttgtaggcaattttattcatat 616 ||||||| | ||||||||| |||| |||||||||||||| ||| ||||||||||| | Sbjct: 15876263 tgcaactgtctatggagtacatgatcatatagacttcgttagaggtgattttattcatgt 15876322 Query: 617 agcgcctcatctgaagg 633 ||||||| |||||||| Sbjct: 15876323 ggcgcctcgtctgaagg 15876339