BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem122j15 (1096 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AY111365.1| Zea mays CL7625_1 mRNA sequence 418 e-113 ref|NM_001054427.1| Oryza sativa (japonica cultivar-group) Os02g... 365 3e-97 dbj|AK068743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 3e-97 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 244 6e-61 dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 244 6e-61 >gb|AY111365.1| Zea mays CL7625_1 mRNA sequence Length = 914 Score = 418 bits (211), Expect = e-113 Identities = 379/437 (86%) Strand = Plus / Minus Query: 466 agcttgtggagcttctcgatcctccattgcataactattttaggcagaacgactgcttaa 525 |||||||||||||||| |||||| ||||||| |||||||||||||| || |||||||| | Sbjct: 609 agcttgtggagcttcttgatccttcattgcacaactattttaggcaaaatgactgcttga 550 Query: 526 attatttcttctgttttcgttgggttcttatacaattcaaaagggagtttagttttgatc 585 | |||||||||||||| || ||||||||||||||||||||||||||||| ||||| || | Sbjct: 549 actatttcttctgtttccgctgggttcttatacaattcaaaagggagttcagtttcgacc 490 Query: 586 agatcatggtcttgtgggaagttttgtggaccaattatttgtcagaacacttccacctgt 645 |||||||| | || ||||||||| ||||| || |||||||||||||||| |||||| ||| Sbjct: 489 agatcatgcttttatgggaagttctgtggtcccattatttgtcagaacatttccacttgt 430 Query: 646 acttgtgcgtggcaatcttgaaaaggtaccgccagcggataattggggagcggatggact 705 |||||||||| ||||||||| || || ||||||||||||||||||| |||||||| Sbjct: 429 acttgtgcgtagcaatcttgnnnnnntatcgtcagcggataattggggagcagatggact 370 Query: 706 tcgacacccttctcaagttcatcaatgagctcagtggtcagatcaatcttgaccgggctc 765 |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 tcgataccctccttaagttcatcaatgagctcagtggtcagatcaatcttgaccgggcta 310 Query: 766 ttcaggatgccgaggcattatgctctgtagcaggtgataacggagctgcttgcattccac 825 | ||||| || |||||||| || || | ||||| || || || ||| | |||||||||| Sbjct: 309 tccaggacgcggaggcattgtgtactattgcaggagaaaatggggcttcctgcattccac 250 Query: 826 ctggaaccccaccttctatgcctatcgagaccgatggcggtctgtacgtacaacaagatg 885 |||||||||||||||| ||||| ||||||||||||| || ||||||| ||| |||| | Sbjct: 249 ctggaaccccaccttcaatgcccgtcgagaccgatggtggcatgtacgtgcaagaagacg 190 Query: 886 aggtcttgtgaggtatc 902 |||||||||||| |||| Sbjct: 189 aggtcttgtgagatatc 173 >ref|NM_001054427.1| Oryza sativa (japonica cultivar-group) Os02g0709800 (Os02g0709800) mRNA, complete cds Length = 2630 Score = 365 bits (184), Expect = 3e-97 Identities = 370/432 (85%) Strand = Plus / Plus Query: 466 agcttgtggagcttctcgatcctccattgcataactattttaggcagaacgactgcttaa 525 |||| ||||||||||| ||||||| || |||||||||||| || ||||||||||||||| Sbjct: 1784 agctcgtggagcttcttgatcctcagttacataactattttcggaagaacgactgcttaa 1843 Query: 526 attatttcttctgttttcgttgggttcttatacaattcaaaagggagtttagttttgatc 585 | || || ||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1844 actactttttctgttttcgttgggttcttatacaattcaaaagggagttcagtttcgatc 1903 Query: 586 agatcatggtcttgtgggaagttttgtggaccaattatttgtcagaacacttccacctgt 645 | |||||| | ||||||||||| ||||||| |||||| ||||||||| |||||||| | Sbjct: 1904 aaatcatgctgctgtgggaagttctgtggacacattattggtcagaacatttccacctct 1963 Query: 646 acttgtgcgtggcaatcttgaaaaggtaccgccagcggataattggggagcggatggact 705 |||| ||||| || ||| ||||||||||||| ||||||||| || |||| |||||| | Sbjct: 1964 acttatgcgtcgcgatcctgaaaaggtaccggtcgcggataataggagagcagatggatt 2023 Query: 706 tcgacacccttctcaagttcatcaatgagctcagtggtcagatcaatcttgaccgggctc 765 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 2024 tcgacacccttctcaagttcatcaatgagctcagtggcgagataaatcttgaccgggcaa 2083 Query: 766 ttcaggatgccgaggcattatgctctgtagcaggtgataacggagctgcttgcattccac 825 ||||||| || ||||||||||| | ||||| |||||| ||||| |||||||| | Sbjct: 2084 ttcaggacgcggaggcattatgtgatcaggcaggccctaacggggctgcctgcattcctc 2143 Query: 826 ctggaaccccaccttctatgcctatcgagaccgatggcggtctgtacgtacaacaagatg 885 |||||||||| ||||||||||| |||||||| || || || || ||||||||| |||| | Sbjct: 2144 ctggaaccccgccttctatgcccatcgagacggacggtggcctctacgtacaagaagacg 2203 Query: 886 aggtcttgtgag 897 ||||| |||||| Sbjct: 2204 aggtcatgtgag 2215 >dbj|AK068743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013162A17, full insert sequence Length = 2631 Score = 365 bits (184), Expect = 3e-97 Identities = 370/432 (85%) Strand = Plus / Plus Query: 466 agcttgtggagcttctcgatcctccattgcataactattttaggcagaacgactgcttaa 525 |||| ||||||||||| ||||||| || |||||||||||| || ||||||||||||||| Sbjct: 1785 agctcgtggagcttcttgatcctcagttacataactattttcggaagaacgactgcttaa 1844 Query: 526 attatttcttctgttttcgttgggttcttatacaattcaaaagggagtttagttttgatc 585 | || || ||||||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 1845 actactttttctgttttcgttgggttcttatacaattcaaaagggagttcagtttcgatc 1904 Query: 586 agatcatggtcttgtgggaagttttgtggaccaattatttgtcagaacacttccacctgt 645 | |||||| | ||||||||||| ||||||| |||||| ||||||||| |||||||| | Sbjct: 1905 aaatcatgctgctgtgggaagttctgtggacacattattggtcagaacatttccacctct 1964 Query: 646 acttgtgcgtggcaatcttgaaaaggtaccgccagcggataattggggagcggatggact 705 |||| ||||| || ||| ||||||||||||| ||||||||| || |||| |||||| | Sbjct: 1965 acttatgcgtcgcgatcctgaaaaggtaccggtcgcggataataggagagcagatggatt 2024 Query: 706 tcgacacccttctcaagttcatcaatgagctcagtggtcagatcaatcttgaccgggctc 765 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 2025 tcgacacccttctcaagttcatcaatgagctcagtggcgagataaatcttgaccgggcaa 2084 Query: 766 ttcaggatgccgaggcattatgctctgtagcaggtgataacggagctgcttgcattccac 825 ||||||| || ||||||||||| | ||||| |||||| ||||| |||||||| | Sbjct: 2085 ttcaggacgcggaggcattatgtgatcaggcaggccctaacggggctgcctgcattcctc 2144 Query: 826 ctggaaccccaccttctatgcctatcgagaccgatggcggtctgtacgtacaacaagatg 885 |||||||||| ||||||||||| |||||||| || || || || ||||||||| |||| | Sbjct: 2145 ctggaaccccgccttctatgcccatcgagacggacggtggcctctacgtacaagaagacg 2204 Query: 886 aggtcttgtgag 897 ||||| |||||| Sbjct: 2205 aggtcatgtgag 2216 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 244 bits (123), Expect = 6e-61 Identities = 279/331 (84%) Strand = Plus / Minus Query: 567 agggagtttagttttgatcagatcatggtcttgtgggaagttttgtggaccaattatttg 626 |||||||| ||||| ||||| |||||| | ||||||||||| ||||||| |||||| | Sbjct: 29392258 agggagttcagtttcgatcaaatcatgctgctgtgggaagttctgtggacacattattgg 29392199 Query: 627 tcagaacacttccacctgtacttgtgcgtggcaatcttgaaaaggtaccgccagcggata 686 |||||||| |||||||| ||||| ||||| || ||| ||||||||||||| ||||||| Sbjct: 29392198 tcagaacatttccacctctacttatgcgtcgcgatcctgaaaaggtaccggtcgcggata 29392139 Query: 687 attggggagcggatggacttcgacacccttctcaagttcatcaatgagctcagtggtcag 746 || || |||| |||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 29392138 ataggagagcagatggatttcgacacccttctcaagttcatcaatgagctcagtggcgag 29392079 Query: 747 atcaatcttgaccgggctcttcaggatgccgaggcattatgctctgtagcaggtgataac 806 || |||||||||||||| ||||||| || ||||||||||| | ||||| |||| Sbjct: 29392078 ataaatcttgaccgggcaattcaggacgcggaggcattatgtgatcaggcaggccctaac 29392019 Query: 807 ggagctgcttgcattccacctggaaccccaccttctatgcctatcgagaccgatggcggt 866 || ||||| |||||||| ||||||||||| ||||||||||| |||||||| || || || Sbjct: 29392018 ggggctgcctgcattcctcctggaaccccgccttctatgcccatcgagacggacggtggc 29391959 Query: 867 ctgtacgtacaacaagatgaggtcttgtgag 897 || ||||||||| |||| |||||| |||||| Sbjct: 29391958 ctctacgtacaagaagacgaggtcatgtgag 29391928 Score = 153 bits (77), Expect = 2e-33 Identities = 125/140 (89%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 432 actaattttgtgtgaatttttctatgtacctcat--agcttgtggagcttctcgatcctc 489 ||||| ||| |||||| ||||||||||||||||| |||| ||||||||||| ||||||| Sbjct: 29393186 actaaatttatgtgaaattttctatgtacctcatgcagctcgtggagcttcttgatcctc 29393127 Query: 490 cattgcataactattttaggcagaacgactgcttaaattatttcttctgttttcgttggg 549 || |||||||||||| || |||||||||||||||| || || |||||||||||||||| Sbjct: 29393126 agttacataactattttcggaagaacgactgcttaaactactttttctgttttcgttggg 29393067 Query: 550 ttcttatacaattcaaaagg 569 |||||||||||||||||||| Sbjct: 29393066 ttcttatacaattcaaaagg 29393047 >dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 244 bits (123), Expect = 6e-61 Identities = 279/331 (84%) Strand = Plus / Minus Query: 567 agggagtttagttttgatcagatcatggtcttgtgggaagttttgtggaccaattatttg 626 |||||||| ||||| ||||| |||||| | ||||||||||| ||||||| |||||| | Sbjct: 43130 agggagttcagtttcgatcaaatcatgctgctgtgggaagttctgtggacacattattgg 43071 Query: 627 tcagaacacttccacctgtacttgtgcgtggcaatcttgaaaaggtaccgccagcggata 686 |||||||| |||||||| ||||| ||||| || ||| ||||||||||||| ||||||| Sbjct: 43070 tcagaacatttccacctctacttatgcgtcgcgatcctgaaaaggtaccggtcgcggata 43011 Query: 687 attggggagcggatggacttcgacacccttctcaagttcatcaatgagctcagtggtcag 746 || || |||| |||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 43010 ataggagagcagatggatttcgacacccttctcaagttcatcaatgagctcagtggcgag 42951 Query: 747 atcaatcttgaccgggctcttcaggatgccgaggcattatgctctgtagcaggtgataac 806 || |||||||||||||| ||||||| || ||||||||||| | ||||| |||| Sbjct: 42950 ataaatcttgaccgggcaattcaggacgcggaggcattatgtgatcaggcaggccctaac 42891 Query: 807 ggagctgcttgcattccacctggaaccccaccttctatgcctatcgagaccgatggcggt 866 || ||||| |||||||| ||||||||||| ||||||||||| |||||||| || || || Sbjct: 42890 ggggctgcctgcattcctcctggaaccccgccttctatgcccatcgagacggacggtggc 42831 Query: 867 ctgtacgtacaacaagatgaggtcttgtgag 897 || ||||||||| |||| |||||| |||||| Sbjct: 42830 ctctacgtacaagaagacgaggtcatgtgag 42800 Score = 153 bits (77), Expect = 2e-33 Identities = 125/140 (89%), Gaps = 2/140 (1%) Strand = Plus / Minus Query: 432 actaattttgtgtgaatttttctatgtacctcat--agcttgtggagcttctcgatcctc 489 ||||| ||| |||||| ||||||||||||||||| |||| ||||||||||| ||||||| Sbjct: 44058 actaaatttatgtgaaattttctatgtacctcatgcagctcgtggagcttcttgatcctc 43999 Query: 490 cattgcataactattttaggcagaacgactgcttaaattatttcttctgttttcgttggg 549 || |||||||||||| || |||||||||||||||| || || |||||||||||||||| Sbjct: 43998 agttacataactattttcggaagaacgactgcttaaactactttttctgttttcgttggg 43939 Query: 550 ttcttatacaattcaaaagg 569 |||||||||||||||||||| Sbjct: 43938 ttcttatacaattcaaaagg 43919