BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem122d17 (1155 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001057778.1| Oryza sativa (japonica cultivar-group) Os03g... 454 e-124 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 454 e-124 gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genom... 454 e-124 >ref|NM_001057778.1| Oryza sativa (japonica cultivar-group) Os03g0745200 (Os03g0745200) mRNA, complete cds Length = 1401 Score = 454 bits (229), Expect = e-124 Identities = 424/489 (86%) Strand = Plus / Plus Query: 404 gccggggagagggagctcacgctcgcgctggacttccgcaagctgatgcacgcgccgctg 463 |||| |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 880 gccgaggagagggagctgacgctcgcgctggacttccggaagcggatgcaggcgccgctg 939 Query: 464 ccgacggggtactacggcagcgccgtccacttcacgcgtgcgcgcgccgacctggcatcc 523 ||||||||||||||||||| ||| || |||||| || ||||||||||||||| | || Sbjct: 940 ccgacggggtactacggcaccgcggtgcacttcgcgacggcgcgcgccgacctgtcgtcg 999 Query: 524 gggctggctgccgtggcggccgcgctgggccggcgcgtggcaggcgtgccggaggaggag 583 |||||||| ||||||||||||| ||| ||||||| ||| | |||||||||||||||| Sbjct: 1000 gggctggcgagcgtggcggccgcggtggagcggcgcgcggccgccgtgccggaggaggag 1059 Query: 584 ctgtggaccgccgtggagtggctgcacgcgcggcagaccgccggcagggagccattccag 643 |||||| ||||| | |||||||||||| |||| ||| |||||||| | ||||| |||||| Sbjct: 1060 ctgtggcccgccatcgagtggctgcacacgcgccaggccgccggcggcgagccgttccag 1119 Query: 644 atgtacgggccggagctcacgtgcatggcgctggaccacgtgcccatgtacggggcggag 703 ||||||||||||||||| |||||||||||||| |||||||||||| | ||||| |||||| Sbjct: 1120 atgtacgggccggagctgacgtgcatggcgctcgaccacgtgcccctctacggcgcggag 1179 Query: 704 ttcgaggccggggtgccaccggcgagcgtgtcgtgccgcgtcggcggggcggccggcgag 763 |||| |||||||| | | |||||| ||| |||||||||||||||||||| ||||||| Sbjct: 1180 ttcgcggccggggcggcgccggcgcgcgccgcgtgccgcgtcggcggggcgagcggcgag 1239 Query: 764 gggctggtgatcgtcatgcccgcggccgagggggacgcggcgagggacgtggttgtgacg 823 || || ||||||||| |||| |||||||||| || | ||||||||||||| |||||| Sbjct: 1240 ggtctcgtgatcgtcctgccttcggccgagggcgagtccgcgagggacgtggcggtgacg 1299 Query: 824 ctgccggcggaggcgacagcaaggatctgccgcgacggcgaggtgctccggtacggcggc 883 |||||||||| || ||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 1300 ctgccggcggcggtgacggccaggatctgccgcgacggcgaggtgctccggtacggcgcc 1359 Query: 884 gaggtggtg 892 || |||||| Sbjct: 1360 gacgtggtg 1368 Score = 200 bits (101), Expect = 9e-48 Identities = 142/155 (91%), Gaps = 3/155 (1%) Strand = Plus / Plus Query: 29 cagctgacggagttcgcggacaagtcgtacgcgctggggctgagctgcacgcacgtccac 88 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | ||| Sbjct: 490 cagctgacggagttcgcggacaaatcgtacgcgctggggctgagctgcacccacctgcac 549 Query: 89 aacgaccccaccgccgccgcgctcttcctccacgcctgggccgccacccaccgccggaac 148 ||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||| | Sbjct: 550 aacgaccccaccgccgccgtgctcttcctcaacgcctgggccgccgcccaccgccggga- 608 Query: 149 accagcccctacccgccgttcctccactcgccggc 183 ||||||||||| |||||||||||||||||||| Sbjct: 609 --tagcccctaccctccgttcctccactcgccggc 641 Score = 91.7 bits (46), Expect = 6e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 278 atgtcctccgccaccttccacttccccgcctcagcgatgcgcgcgctgctctcatctctc 337 ||||| |||||||| |||| |||| ||| | ||||||||||||||||| || | || Sbjct: 727 atgtcatccgccacgttccgcttcagcgcagccgcgatgcgcgcgctgctgtccgccgtc 786 Query: 338 gagccagacaccacccccttcgccgcgctcgccgcgctcttctggctccgcgtc 391 ||||| | ||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 787 gagccgggcaccaccccgttcgccgcgctggccgcgctcttctggctccgcgtc 840 >dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 454 bits (229), Expect = e-124 Identities = 424/489 (86%) Strand = Plus / Minus Query: 404 gccggggagagggagctcacgctcgcgctggacttccgcaagctgatgcacgcgccgctg 463 |||| |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 30413675 gccgaggagagggagctgacgctcgcgctggacttccggaagcggatgcaggcgccgctg 30413616 Query: 464 ccgacggggtactacggcagcgccgtccacttcacgcgtgcgcgcgccgacctggcatcc 523 ||||||||||||||||||| ||| || |||||| || ||||||||||||||| | || Sbjct: 30413615 ccgacggggtactacggcaccgcggtgcacttcgcgacggcgcgcgccgacctgtcgtcg 30413556 Query: 524 gggctggctgccgtggcggccgcgctgggccggcgcgtggcaggcgtgccggaggaggag 583 |||||||| ||||||||||||| ||| ||||||| ||| | |||||||||||||||| Sbjct: 30413555 gggctggcgagcgtggcggccgcggtggagcggcgcgcggccgccgtgccggaggaggag 30413496 Query: 584 ctgtggaccgccgtggagtggctgcacgcgcggcagaccgccggcagggagccattccag 643 |||||| ||||| | |||||||||||| |||| ||| |||||||| | ||||| |||||| Sbjct: 30413495 ctgtggcccgccatcgagtggctgcacacgcgccaggccgccggcggcgagccgttccag 30413436 Query: 644 atgtacgggccggagctcacgtgcatggcgctggaccacgtgcccatgtacggggcggag 703 ||||||||||||||||| |||||||||||||| |||||||||||| | ||||| |||||| Sbjct: 30413435 atgtacgggccggagctgacgtgcatggcgctcgaccacgtgcccctctacggcgcggag 30413376 Query: 704 ttcgaggccggggtgccaccggcgagcgtgtcgtgccgcgtcggcggggcggccggcgag 763 |||| |||||||| | | |||||| ||| |||||||||||||||||||| ||||||| Sbjct: 30413375 ttcgcggccggggcggcgccggcgcgcgccgcgtgccgcgtcggcggggcgagcggcgag 30413316 Query: 764 gggctggtgatcgtcatgcccgcggccgagggggacgcggcgagggacgtggttgtgacg 823 || || ||||||||| |||| |||||||||| || | ||||||||||||| |||||| Sbjct: 30413315 ggtctcgtgatcgtcctgccttcggccgagggcgagtccgcgagggacgtggcggtgacg 30413256 Query: 824 ctgccggcggaggcgacagcaaggatctgccgcgacggcgaggtgctccggtacggcggc 883 |||||||||| || ||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 30413255 ctgccggcggcggtgacggccaggatctgccgcgacggcgaggtgctccggtacggcgcc 30413196 Query: 884 gaggtggtg 892 || |||||| Sbjct: 30413195 gacgtggtg 30413187 Score = 208 bits (105), Expect = 4e-50 Identities = 146/159 (91%), Gaps = 3/159 (1%) Strand = Plus / Minus Query: 25 cgtgcagctgacggagttcgcggacaagtcgtacgcgctggggctgagctgcacgcacgt 84 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct: 30414069 cgtgcagctgacggagttcgcggacaaatcgtacgcgctggggctgagctgcacccacct 30414010 Query: 85 ccacaacgaccccaccgccgccgcgctcttcctccacgcctgggccgccacccaccgccg 144 |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 30414009 gcacaacgaccccaccgccgccgtgctcttcctcaacgcctgggccgccgcccaccgccg 30413950 Query: 145 gaacaccagcccctacccgccgttcctccactcgccggc 183 | | ||||||||||| |||||||||||||||||||| Sbjct: 30413949 gga---tagcccctaccctccgttcctccactcgccggc 30413914 Score = 91.7 bits (46), Expect = 6e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 278 atgtcctccgccaccttccacttccccgcctcagcgatgcgcgcgctgctctcatctctc 337 ||||| |||||||| |||| |||| ||| | ||||||||||||||||| || | || Sbjct: 30413828 atgtcatccgccacgttccgcttcagcgcagccgcgatgcgcgcgctgctgtccgccgtc 30413769 Query: 338 gagccagacaccacccccttcgccgcgctcgccgcgctcttctggctccgcgtc 391 ||||| | ||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 30413768 gagccgggcaccaccccgttcgccgcgctggccgcgctcttctggctccgcgtc 30413715 >gb|AC092558.4| Oryza sativa chromosome 3 BAC OSJNBb0036F07 genomic sequence, complete sequence Length = 130359 Score = 454 bits (229), Expect = e-124 Identities = 424/489 (86%) Strand = Plus / Minus Query: 404 gccggggagagggagctcacgctcgcgctggacttccgcaagctgatgcacgcgccgctg 463 |||| |||||||||||| |||||||||||||||||||| |||| |||||| ||||||||| Sbjct: 113933 gccgaggagagggagctgacgctcgcgctggacttccggaagcggatgcaggcgccgctg 113874 Query: 464 ccgacggggtactacggcagcgccgtccacttcacgcgtgcgcgcgccgacctggcatcc 523 ||||||||||||||||||| ||| || |||||| || ||||||||||||||| | || Sbjct: 113873 ccgacggggtactacggcaccgcggtgcacttcgcgacggcgcgcgccgacctgtcgtcg 113814 Query: 524 gggctggctgccgtggcggccgcgctgggccggcgcgtggcaggcgtgccggaggaggag 583 |||||||| ||||||||||||| ||| ||||||| ||| | |||||||||||||||| Sbjct: 113813 gggctggcgagcgtggcggccgcggtggagcggcgcgcggccgccgtgccggaggaggag 113754 Query: 584 ctgtggaccgccgtggagtggctgcacgcgcggcagaccgccggcagggagccattccag 643 |||||| ||||| | |||||||||||| |||| ||| |||||||| | ||||| |||||| Sbjct: 113753 ctgtggcccgccatcgagtggctgcacacgcgccaggccgccggcggcgagccgttccag 113694 Query: 644 atgtacgggccggagctcacgtgcatggcgctggaccacgtgcccatgtacggggcggag 703 ||||||||||||||||| |||||||||||||| |||||||||||| | ||||| |||||| Sbjct: 113693 atgtacgggccggagctgacgtgcatggcgctcgaccacgtgcccctctacggcgcggag 113634 Query: 704 ttcgaggccggggtgccaccggcgagcgtgtcgtgccgcgtcggcggggcggccggcgag 763 |||| |||||||| | | |||||| ||| |||||||||||||||||||| ||||||| Sbjct: 113633 ttcgcggccggggcggcgccggcgcgcgccgcgtgccgcgtcggcggggcgagcggcgag 113574 Query: 764 gggctggtgatcgtcatgcccgcggccgagggggacgcggcgagggacgtggttgtgacg 823 || || ||||||||| |||| |||||||||| || | ||||||||||||| |||||| Sbjct: 113573 ggtctcgtgatcgtcctgccttcggccgagggcgagtccgcgagggacgtggcggtgacg 113514 Query: 824 ctgccggcggaggcgacagcaaggatctgccgcgacggcgaggtgctccggtacggcggc 883 |||||||||| || ||| || ||||||||||||||||||||||||||||||||||||| | Sbjct: 113513 ctgccggcggcggtgacggccaggatctgccgcgacggcgaggtgctccggtacggcgcc 113454 Query: 884 gaggtggtg 892 || |||||| Sbjct: 113453 gacgtggtg 113445 Score = 208 bits (105), Expect = 4e-50 Identities = 146/159 (91%), Gaps = 3/159 (1%) Strand = Plus / Minus Query: 25 cgtgcagctgacggagttcgcggacaagtcgtacgcgctggggctgagctgcacgcacgt 84 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| | Sbjct: 114327 cgtgcagctgacggagttcgcggacaaatcgtacgcgctggggctgagctgcacccacct 114268 Query: 85 ccacaacgaccccaccgccgccgcgctcttcctccacgcctgggccgccacccaccgccg 144 |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||| Sbjct: 114267 gcacaacgaccccaccgccgccgtgctcttcctcaacgcctgggccgccgcccaccgccg 114208 Query: 145 gaacaccagcccctacccgccgttcctccactcgccggc 183 | | ||||||||||| |||||||||||||||||||| Sbjct: 114207 gga---tagcccctaccctccgttcctccactcgccggc 114172 Score = 91.7 bits (46), Expect = 6e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 278 atgtcctccgccaccttccacttccccgcctcagcgatgcgcgcgctgctctcatctctc 337 ||||| |||||||| |||| |||| ||| | ||||||||||||||||| || | || Sbjct: 114086 atgtcatccgccacgttccgcttcagcgcagccgcgatgcgcgcgctgctgtccgccgtc 114027 Query: 338 gagccagacaccacccccttcgccgcgctcgccgcgctcttctggctccgcgtc 391 ||||| | ||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 114026 gagccgggcaccaccccgttcgccgcgctggccgcgctcttctggctccgcgtc 113973