BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem122d01 (1104 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Do... 226 1e-55 dbj|AK241364.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 220 9e-54 ref|NM_001068645.1| Oryza sativa (japonica cultivar-group) Os08g... 220 9e-54 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 220 9e-54 dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic D... 220 9e-54 >gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter region and complete cds Length = 12502 Score = 226 bits (114), Expect = 1e-55 Identities = 168/186 (90%) Strand = Plus / Plus Query: 174 cggcggcgggggaaggggccccgtgcccgcggtgcgagtcgcgggacaccaagttctgct 233 |||||| ||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 9070 cggcggtgggcgagggggacccgtgcccgcggtgcgcgtcgcgggacaccaagttctgct 9129 Query: 234 actacaacaactacaacacctcccagccgcgccaattctgcaagtgctgacgccgctact 293 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 9130 actacaacaactacaacacctcccagccgcgccacttctgcaagggctgccgccgctact 9189 Query: 294 ggaccaagggaggcaccctccgcaacgcacccggcggtggtggcacccgtaagaagtcct 353 |||||||||| ||||| || ||||||| |||| ||| || |||||||| |||||| ||| Sbjct: 9190 ggaccaagggcggcacgctgcgcaacgtccccgtcggcggcggcacccgcaagaagccct 9249 Query: 354 cctcct 359 |||||| Sbjct: 9250 cctcct 9255 >dbj|AK241364.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065152E11, full insert sequence Length = 1266 Score = 220 bits (111), Expect = 9e-54 Identities = 171/191 (89%) Strand = Plus / Plus Query: 164 gcggcagcaacggcggcgggggaaggggccccgtgcccgcggtgcgagtcgcgggacacc 223 |||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 314 gcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacacc 373 Query: 224 aagttctgctactacaacaactacaacacctcccagccgcgccaattctgcaagtgctga 283 || ||||||||||||||||||||||||||||||||||| || || ||||||||||| || Sbjct: 374 aaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgc 433 Query: 284 cgccgctactggaccaagggaggcaccctccgcaacgcacccggcggtggtggcacccgt 343 |||||||||||||||||||| ||||| |||||||||| |||| ||| || ||||| || Sbjct: 434 cgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgc 493 Query: 344 aagaagtcctc 354 ||||||||||| Sbjct: 494 aagaagtcctc 504 Score = 113 bits (57), Expect = 2e-21 Identities = 104/119 (87%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 495 cgagcgagatcaccacggagctcgtggtccccgccgcggaggaggactccttcacggacc 554 ||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||| Sbjct: 738 cgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacc 797 Query: 555 tgctgcagccggacgacgccgccgccgtcgcgctcgggctcgggttctcggactacccg 613 | ||||||||| ||| ||||||||||| | ||||| |||| ||||| ||||||||| Sbjct: 798 tcctgcagccg---gactccgccgccgtcaccctcggcctcgacttctccgactacccg 853 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 70 cggccaccggccggcgcagcagttcgccagcgtcgacctccgccgccccaagggctacgc 129 ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 184 cggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgc 243 >ref|NM_001068645.1| Oryza sativa (japonica cultivar-group) Os08g0490100 (Os08g0490100) mRNA, complete cds Length = 1128 Score = 220 bits (111), Expect = 9e-54 Identities = 171/191 (89%) Strand = Plus / Plus Query: 164 gcggcagcaacggcggcgggggaaggggccccgtgcccgcggtgcgagtcgcgggacacc 223 |||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 451 gcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacacc 510 Query: 224 aagttctgctactacaacaactacaacacctcccagccgcgccaattctgcaagtgctga 283 || ||||||||||||||||||||||||||||||||||| || || ||||||||||| || Sbjct: 511 aaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgc 570 Query: 284 cgccgctactggaccaagggaggcaccctccgcaacgcacccggcggtggtggcacccgt 343 |||||||||||||||||||| ||||| |||||||||| |||| ||| || ||||| || Sbjct: 571 cgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgc 630 Query: 344 aagaagtcctc 354 ||||||||||| Sbjct: 631 aagaagtcctc 641 Score = 113 bits (57), Expect = 2e-21 Identities = 104/119 (87%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 495 cgagcgagatcaccacggagctcgtggtccccgccgcggaggaggactccttcacggacc 554 ||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||| Sbjct: 875 cgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacc 934 Query: 555 tgctgcagccggacgacgccgccgccgtcgcgctcgggctcgggttctcggactacccg 613 | ||||||||| ||| ||||||||||| | ||||| |||| ||||| ||||||||| Sbjct: 935 tcctgcagccg---gactccgccgccgtcaccctcggcctcgacttctccgactacccg 990 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 70 cggccaccggccggcgcagcagttcgccagcgtcgacctccgccgccccaagggctacgc 129 ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 321 cggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgc 380 >dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 220 bits (111), Expect = 9e-54 Identities = 171/191 (89%) Strand = Plus / Plus Query: 164 gcggcagcaacggcggcgggggaaggggccccgtgcccgcggtgcgagtcgcgggacacc 223 |||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 24225745 gcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacacc 24225804 Query: 224 aagttctgctactacaacaactacaacacctcccagccgcgccaattctgcaagtgctga 283 || ||||||||||||||||||||||||||||||||||| || || ||||||||||| || Sbjct: 24225805 aaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgc 24225864 Query: 284 cgccgctactggaccaagggaggcaccctccgcaacgcacccggcggtggtggcacccgt 343 |||||||||||||||||||| ||||| |||||||||| |||| ||| || ||||| || Sbjct: 24225865 cgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgc 24225924 Query: 344 aagaagtcctc 354 ||||||||||| Sbjct: 24225925 aagaagtcctc 24225935 Score = 113 bits (57), Expect = 2e-21 Identities = 104/119 (87%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 495 cgagcgagatcaccacggagctcgtggtccccgccgcggaggaggactccttcacggacc 554 ||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||| Sbjct: 24226169 cgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacc 24226228 Query: 555 tgctgcagccggacgacgccgccgccgtcgcgctcgggctcgggttctcggactacccg 613 | ||||||||| ||| ||||||||||| | ||||| |||| ||||| ||||||||| Sbjct: 24226229 tcctgcagccg---gactccgccgccgtcaccctcggcctcgacttctccgactacccg 24226284 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 70 cggccaccggccggcgcagcagttcgccagcgtcgacctccgccgccccaagggctacgc 129 ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 24225615 cggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgc 24225674 >dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 220 bits (111), Expect = 9e-54 Identities = 171/191 (89%) Strand = Plus / Plus Query: 164 gcggcagcaacggcggcgggggaaggggccccgtgcccgcggtgcgagtcgcgggacacc 223 |||||||| ||||||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 92084 gcggcagcggcggcggcgggggagggtgacccgtgcccgcggtgcgagtcgcgggacacc 92143 Query: 224 aagttctgctactacaacaactacaacacctcccagccgcgccaattctgcaagtgctga 283 || ||||||||||||||||||||||||||||||||||| || || ||||||||||| || Sbjct: 92144 aaattctgctactacaacaactacaacacctcccagccccggcacttctgcaagtgttgc 92203 Query: 284 cgccgctactggaccaagggaggcaccctccgcaacgcacccggcggtggtggcacccgt 343 |||||||||||||||||||| ||||| |||||||||| |||| ||| || ||||| || Sbjct: 92204 cgccgctactggaccaagggtggcacgctccgcaacgtccccgtcggcggcggcacgcgc 92263 Query: 344 aagaagtcctc 354 ||||||||||| Sbjct: 92264 aagaagtcctc 92274 Score = 113 bits (57), Expect = 2e-21 Identities = 104/119 (87%), Gaps = 3/119 (2%) Strand = Plus / Plus Query: 495 cgagcgagatcaccacggagctcgtggtccccgccgcggaggaggactccttcacggacc 554 ||||||||||||||||||||||||| ||||| |||| |||||||||||| |||||||||| Sbjct: 92508 cgagcgagatcaccacggagctcgtcgtcccggccgtggaggaggactcgttcacggacc 92567 Query: 555 tgctgcagccggacgacgccgccgccgtcgcgctcgggctcgggttctcggactacccg 613 | ||||||||| ||| ||||||||||| | ||||| |||| ||||| ||||||||| Sbjct: 92568 tcctgcagccg---gactccgccgccgtcaccctcggcctcgacttctccgactacccg 92623 Score = 87.7 bits (44), Expect = 9e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 70 cggccaccggccggcgcagcagttcgccagcgtcgacctccgccgccccaagggctacgc 129 ||||| ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 91954 cggccgccggccggcgcagcagttcgccaccgtcgacctgcgccgtcccaagggctacgc 92013