BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem122c22 (1029 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome... 329 1e-86 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 216 1e-52 ref|NM_001074558.1| Oryza sativa (japonica cultivar-group) Os11g... 186 1e-43 >gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 329 bits (166), Expect = 1e-86 Identities = 259/290 (89%) Strand = Plus / Minus Query: 187 aggcggcggcggtaaggctggtggggtgcgacggccgggtgcagacgtaccggcggccag 246 ||||||||||||| |||||||||||| ||||||| |||| ||||||| || |||| | Sbjct: 133247 aggcggcggcggtgaggctggtggggagcgacgggaaggtgaggacgtacaggaggccgg 133188 Query: 247 tgacggcgctggaggtgatgcagcagcacccgaggcacctggtctgccgctccgacgcgc 306 |||||||| |||| ||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 133187 tgacggcgagggagctgatgcagcagcacccgcggcacctggtgtgccgctccgacgcgc 133128 Query: 307 tgctcatcggggagaagatcccggctgtggcgccgaccgaggagctgctgcccgggcagg 366 ||||||||||||||||||||||||| |||||||| ||||| ||| ||| || || | Sbjct: 133127 tgctcatcggggagaagatcccggcggtggcgcccggcgaggtgctcgagccgggccacg 133068 Query: 367 cctacttcctcctccccgcccacctcttccactccgtcctctccttcgtctccctcgcct 426 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133067 cctacttcctcctccccgcccacctgttccactccgtcctctccttcgtctccctcgcct 133008 Query: 427 cctccctcctcctcctcctctccacctcccccgcctctgccggcaagaag 476 ||||||||||||||||||||||| ||||| ||||||| |||| ||||||| Sbjct: 133007 cctccctcctcctcctcctctccgcctcctccgcctccgccgccaagaag 132958 Score = 143 bits (72), Expect = 2e-30 Identities = 108/120 (90%) Strand = Plus / Minus Query: 610 ccgtgctgcgcggggacgagaggctggagaaggactacgaggagctggtcgggtacggca 669 ||||||||||||||||| ||| |||||||||||| ||||||||||| ||||| ||| ||| Sbjct: 132830 ccgtgctgcgcggggacaagaagctggagaaggagtacgaggagctcgtcggctacagca 132771 Query: 670 aggcgcggcggtgggcgcccaagctggagaccatccaagaagtggtggtcgctgccgccg 729 |||||||||||||| ||||||||||||| |||||||||||||| || | ||| ||||||| Sbjct: 132770 aggcgcggcggtggtcgcccaagctggacaccatccaagaagtcgtcgccgccgccgccg 132711 Score = 103 bits (52), Expect = 1e-18 Identities = 58/60 (96%) Strand = Plus / Minus Query: 495 ttcgagctcctccgcaccgcctccggcaccctccagatcaagttctccgacgacttcctc 554 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 132942 ttcgagctcctccgcaccgcgtccggcacgctccagatcaagttctccgacgacttcctc 132883 Score = 97.6 bits (49), Expect = 9e-17 Identities = 97/110 (88%), Gaps = 6/110 (5%) Strand = Plus / Minus Query: 62 agccatgaagcagtggaagtccctcgtggcgctgcactcctccgcgc---cctcctgctt 118 ||||||||||||||||| ||| ||||| |||||||||||||| |||| |||||||||| Sbjct: 133384 agccatgaagcagtggaggtcgctcgtcgcgctgcactcctcggcgccctcctcctgctt 133325 Query: 119 cccgcagccgccgtcgacgccgtccccgtgcccctcgcctccgcgggagg 168 |||||||||||| || ||||||| ||||||||||| || |||||||||| Sbjct: 133324 cccgcagccgcc--cg-cgccgtcgccgtgcccctccccgccgcgggagg 133278 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 216 bits (109), Expect = 1e-52 Identities = 249/292 (85%), Gaps = 4/292 (1%) Strand = Plus / Minus Query: 189 gcggcggcggtaaggctggtggggtgcgacggccgggtgcagacgtaccggcggccagtg 248 ||||||||||| |||||||||||| ||||||| |||| ||| ||| || |||| || Sbjct: 18867418 gcggcggcggtgaggctggtggggagcgacgggaaggtgaggacttacaggaggccgttg 18867359 Query: 249 acggcgctggaggtgatgcagcagcacccgaggcacctggtctgccgctccg-acgc-gc 306 ||| || |||| ||||||| ||||||||| |||||||||| |||||||||| |||| | Sbjct: 18867358 acgtcgagggagctgatgcatcagcacccgcggcacctggtgtgccgctccggacgcagt 18867299 Query: 307 tgctcatcggggagaagatcccggctgtggcgccgaccgaggagctgctgcccgggcagg 366 ||||||||||||||||||||||||| ||||||| ||||| ||| ||| || || | Sbjct: 18867298 tgctcatcggggagaagatcccggcgttggcgcccggcgaggtgctcgagccgggccacg 18867239 Query: 367 cctacttcctcctccccgcccacctcttccactccgtcctctccttcgtctccctcg--c 424 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 18867238 cctacttcctcctcaccgcccacctgttccactccgtcctctccttcgtctccctcgcac 18867179 Query: 425 ctcctccctcctcctcctcctctccacctcccccgcctctgccggcaagaag 476 |||||||||||||||||||||||| ||||| ||||||| |||| ||||||| Sbjct: 18867178 atcctccctcctcctcctcctctccgcctcctccgcctccgccgccaagaag 18867127 Score = 143 bits (72), Expect = 2e-30 Identities = 108/120 (90%) Strand = Plus / Minus Query: 610 ccgtgctgcgcggggacgagaggctggagaaggactacgaggagctggtcgggtacggca 669 ||||||||||||||||| ||| |||||||||||| ||||||||||| ||||| ||| ||| Sbjct: 18866999 ccgtgctgcgcggggacaagaagctggagaaggagtacgaggagctcgtcggctacagca 18866940 Query: 670 aggcgcggcggtgggcgcccaagctggagaccatccaagaagtggtggtcgctgccgccg 729 |||||||||||||| ||||||||||||| |||||||||||||| || | ||| ||||||| Sbjct: 18866939 aggcgcggcggtggtcgcccaagctggacaccatccaagaagtcgtcgccgccgccgccg 18866880 Score = 103 bits (52), Expect = 1e-18 Identities = 58/60 (96%) Strand = Plus / Minus Query: 495 ttcgagctcctccgcaccgcctccggcaccctccagatcaagttctccgacgacttcctc 554 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 18867111 ttcgagctcctccgcaccgcgtccggcacgctccagatcaagttctccgacgacttcctc 18867052 Score = 83.8 bits (42), Expect = 1e-12 Identities = 97/111 (87%), Gaps = 7/111 (6%) Strand = Plus / Minus Query: 62 agccatgaagcagtggaag-tccctcgtggcgctgcactcctccgcgcc---ctcctgct 117 ||||||||||||||||| | || ||||| |||||||||||||| ||||| |||||||| Sbjct: 18867559 agccatgaagcagtggatggtcgctcgtcgcgctgcactcctcggcgccgtcctcctgct 18867500 Query: 118 tcccgcagccgccgtcgacgccgtccccgtgcccctcgcctccgcgggagg 168 ||||||||||||| || ||||||| ||||||||||| || |||||||||| Sbjct: 18867499 tcccgcagccgcc--cg-cgccgtcgccgtgcccctccccgccgcgggagg 18867452 >ref|NM_001074558.1| Oryza sativa (japonica cultivar-group) Os11g0536000 (Os11g0536000) mRNA, complete cds Length = 774 Score = 186 bits (94), Expect = 1e-43 Identities = 183/209 (87%), Gaps = 4/209 (1%) Strand = Plus / Plus Query: 272 gcacccgaggcacctggtctgccgctccg-acgc-gctgctcatcggggagaagatcccg 329 ||||||| |||||||||| |||||||||| |||| | ||||||||||||||||||||||| Sbjct: 146 gcacccgcggcacctggtgtgccgctccggacgcagttgctcatcggggagaagatcccg 205 Query: 330 gctgtggcgccgaccgaggagctgctgcccgggcaggcctacttcctcctccccgcccac 389 || ||||||| ||||| ||| ||| || || ||||||||||||||| |||||||| Sbjct: 206 gcgttggcgcccggcgaggtgctcgagccgggccacgcctacttcctcctcaccgcccac 265 Query: 390 ctcttccactccgtcctctccttcgtctccctcg--cctcctccctcctcctcctcctct 447 || ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 266 ctgttccactccgtcctctccttcgtctccctcgcacatcctccctcctcctcctcctct 325 Query: 448 ccacctcccccgcctctgccggcaagaag 476 || ||||| ||||||| |||| ||||||| Sbjct: 326 ccgcctcctccgcctccgccgccaagaag 354 Score = 143 bits (72), Expect = 2e-30 Identities = 108/120 (90%) Strand = Plus / Plus Query: 610 ccgtgctgcgcggggacgagaggctggagaaggactacgaggagctggtcgggtacggca 669 ||||||||||||||||| ||| |||||||||||| ||||||||||| ||||| ||| ||| Sbjct: 482 ccgtgctgcgcggggacaagaagctggagaaggagtacgaggagctcgtcggctacagca 541 Query: 670 aggcgcggcggtgggcgcccaagctggagaccatccaagaagtggtggtcgctgccgccg 729 |||||||||||||| ||||||||||||| |||||||||||||| || | ||| ||||||| Sbjct: 542 aggcgcggcggtggtcgcccaagctggacaccatccaagaagtcgtcgccgccgccgccg 601 Score = 103 bits (52), Expect = 1e-18 Identities = 58/60 (96%) Strand = Plus / Plus Query: 495 ttcgagctcctccgcaccgcctccggcaccctccagatcaagttctccgacgacttcctc 554 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 370 ttcgagctcctccgcaccgcgtccggcacgctccagatcaagttctccgacgacttcctc 429