BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121p07 (1044 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060691.1| Oryza sativa (japonica cultivar-group) Os04g... 236 1e-58 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 236 1e-58 emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 236 1e-58 dbj|AK108652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 236 1e-58 emb|CT831437.1| Oryza sativa (indica cultivar-group) cDNA clone:... 143 2e-30 >ref|NM_001060691.1| Oryza sativa (japonica cultivar-group) Os04g0662400 (Os04g0662400) mRNA, complete cds Length = 1050 Score = 236 bits (119), Expect = 1e-58 Identities = 199/225 (88%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 213 cgcggtgccggcggggcacgtggcggtgcgcgtggaaggccgcgccgggggctcgacgcg 272 |||||| |||||||| |||||||| ||||| |||| |||| ||| | || | ||| ||| Sbjct: 253 cgcggttccggcgggtcacgtggccgtgcgggtgggaggcggcggggaggacgcgaggcg 312 Query: 273 gttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggcaggc 332 |||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 313 gttcgtggtgcgggtggcgcacttgaaccacccggcgttccgggagctgctccgccaggc 372 Query: 333 ggaggaggaatacggcttcccgtc---cgcctccggccccatcgcgctcccctgcgacga 389 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 373 ggaggaggagtacggcttcccgtccggcgcctccggccccgtcgcgctcccctgcgacga 432 Query: 390 ggaccacctcctcgacgtcctccgccgcgcgtcgtccgaggagcg 434 ||||||| ||| ||||||||||||||||| ||| ||||| ||||| Sbjct: 433 ggaccacttccgcgacgtcctccgccgcgtgtcctccgacgagcg 477 Score = 87.7 bits (44), Expect = 8e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 106 atgtgcaagatcatcacgatcccttccctcgtgtggctgcgctgcaccgtgaggcggtgg 165 ||||||||| |||||||||||| || ||||| ||||||||| |||| ||| |||||||| Sbjct: 140 atgtgcaaggtcatcacgatccagtcgctcgtctggctgcgccgcacggtgcggcggtgg 199 Query: 166 cgctcccgcgccgcgg 181 |||||||||||||||| Sbjct: 200 cgctcccgcgccgcgg 215 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 236 bits (119), Expect = 1e-58 Identities = 199/225 (88%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 213 cgcggtgccggcggggcacgtggcggtgcgcgtggaaggccgcgccgggggctcgacgcg 272 |||||| |||||||| |||||||| ||||| |||| |||| ||| | || | ||| ||| Sbjct: 33839019 cgcggttccggcgggtcacgtggccgtgcgggtgggaggcggcggggaggacgcgaggcg 33838960 Query: 273 gttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggcaggc 332 |||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 33838959 gttcgtggtgcgggtggcgcacttgaaccacccggcgttccgggagctgctccgccaggc 33838900 Query: 333 ggaggaggaatacggcttcccgtc---cgcctccggccccatcgcgctcccctgcgacga 389 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 33838899 ggaggaggagtacggcttcccgtccggcgcctccggccccgtcgcgctcccctgcgacga 33838840 Query: 390 ggaccacctcctcgacgtcctccgccgcgcgtcgtccgaggagcg 434 ||||||| ||| ||||||||||||||||| ||| ||||| ||||| Sbjct: 33838839 ggaccacttccgcgacgtcctccgccgcgtgtcctccgacgagcg 33838795 Score = 143 bits (72), Expect = 2e-30 Identities = 115/128 (89%), Gaps = 6/128 (4%) Strand = Plus / Minus Query: 270 gcggttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggca 329 ||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 33823945 gcggttcgtggtgcgggcggcgcacctgaaccacccggtgttcagggagctgctccggca 33823886 Query: 330 ggcggaggaggaatacggcttcccgtc---cgcctcc---ggccccatcgcgctcccctg 383 |||||||||||| |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 33823885 ggcggaggaggagtacggcttcccgtcgggcgcctactgtggccccatcgcgctcccctg 33823826 Query: 384 cgacgagg 391 |||||||| Sbjct: 33823825 cgacgagg 33823818 Score = 87.7 bits (44), Expect = 8e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 106 atgtgcaagatcatcacgatcccttccctcgtgtggctgcgctgcaccgtgaggcggtgg 165 ||||||||| |||||||||||| || ||||| ||||||||| |||| ||| |||||||| Sbjct: 33839132 atgtgcaaggtcatcacgatccagtcgctcgtctggctgcgccgcacggtgcggcggtgg 33839073 Query: 166 cgctcccgcgccgcgg 181 |||||||||||||||| Sbjct: 33839072 cgctcccgcgccgcgg 33839057 >emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 236 bits (119), Expect = 1e-58 Identities = 199/225 (88%), Gaps = 3/225 (1%) Strand = Plus / Minus Query: 213 cgcggtgccggcggggcacgtggcggtgcgcgtggaaggccgcgccgggggctcgacgcg 272 |||||| |||||||| |||||||| ||||| |||| |||| ||| | || | ||| ||| Sbjct: 50918 cgcggttccggcgggtcacgtggccgtgcgggtgggaggcggcggggaggacgcgaggcg 50859 Query: 273 gttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggcaggc 332 |||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 50858 gttcgtggtgcgggtggcgcacttgaaccacccggcgttccgggagctgctccgccaggc 50799 Query: 333 ggaggaggaatacggcttcccgtc---cgcctccggccccatcgcgctcccctgcgacga 389 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 50798 ggaggaggagtacggcttcccgtccggcgcctccggccccgtcgcgctcccctgcgacga 50739 Query: 390 ggaccacctcctcgacgtcctccgccgcgcgtcgtccgaggagcg 434 ||||||| ||| ||||||||||||||||| ||| ||||| ||||| Sbjct: 50738 ggaccacttccgcgacgtcctccgccgcgtgtcctccgacgagcg 50694 Score = 143 bits (72), Expect = 2e-30 Identities = 115/128 (89%), Gaps = 6/128 (4%) Strand = Plus / Minus Query: 270 gcggttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggca 329 ||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 35844 gcggttcgtggtgcgggcggcgcacctgaaccacccggtgttcagggagctgctccggca 35785 Query: 330 ggcggaggaggaatacggcttcccgtc---cgcctcc---ggccccatcgcgctcccctg 383 |||||||||||| |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 35784 ggcggaggaggagtacggcttcccgtcgggcgcctactgtggccccatcgcgctcccctg 35725 Query: 384 cgacgagg 391 |||||||| Sbjct: 35724 cgacgagg 35717 Score = 87.7 bits (44), Expect = 8e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 106 atgtgcaagatcatcacgatcccttccctcgtgtggctgcgctgcaccgtgaggcggtgg 165 ||||||||| |||||||||||| || ||||| ||||||||| |||| ||| |||||||| Sbjct: 51031 atgtgcaaggtcatcacgatccagtcgctcgtctggctgcgccgcacggtgcggcggtgg 50972 Query: 166 cgctcccgcgccgcgg 181 |||||||||||||||| Sbjct: 50971 cgctcccgcgccgcgg 50956 >dbj|AK108652.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-C10, full insert sequence Length = 1050 Score = 236 bits (119), Expect = 1e-58 Identities = 199/225 (88%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 213 cgcggtgccggcggggcacgtggcggtgcgcgtggaaggccgcgccgggggctcgacgcg 272 |||||| |||||||| |||||||| ||||| |||| |||| ||| | || | ||| ||| Sbjct: 253 cgcggttccggcgggtcacgtggccgtgcgggtgggaggcggcggggaggacgcgaggcg 312 Query: 273 gttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggcaggc 332 |||| |||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 313 gttcgtggtgcgggtggcgcacttgaaccacccggcgttccgggagctgctccgccaggc 372 Query: 333 ggaggaggaatacggcttcccgtc---cgcctccggccccatcgcgctcccctgcgacga 389 ||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 373 ggaggaggagtacggcttcccgtccggcgcctccggccccgtcgcgctcccctgcgacga 432 Query: 390 ggaccacctcctcgacgtcctccgccgcgcgtcgtccgaggagcg 434 ||||||| ||| ||||||||||||||||| ||| ||||| ||||| Sbjct: 433 ggaccacttccgcgacgtcctccgccgcgtgtcctccgacgagcg 477 Score = 87.7 bits (44), Expect = 8e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 106 atgtgcaagatcatcacgatcccttccctcgtgtggctgcgctgcaccgtgaggcggtgg 165 ||||||||| |||||||||||| || ||||| ||||||||| |||| ||| |||||||| Sbjct: 140 atgtgcaaggtcatcacgatccagtcgctcgtctggctgcgccgcacggtgcggcggtgg 199 Query: 166 cgctcccgcgccgcgg 181 |||||||||||||||| Sbjct: 200 cgctcccgcgccgcgg 215 >emb|CT831437.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA055P12, full insert sequence Length = 974 Score = 143 bits (72), Expect = 2e-30 Identities = 115/128 (89%), Gaps = 6/128 (4%) Strand = Plus / Plus Query: 270 gcggttcctggtgcggctggcgcacctgaaccacccggcgttccgggagctgctccggca 329 ||||||| |||||||| |||||||||||||||||||| |||| |||||||||||||||| Sbjct: 280 gcggttcgtggtgcgggcggcgcacctgaaccacccggtgttcagggagctgctccggca 339 Query: 330 ggcggaggaggaatacggcttcccgtc---cgcctcc---ggccccatcgcgctcccctg 383 |||||||||||| |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 340 ggcggaggaggagtacggcttcccgtcgggcgcctactgtggccccatcgcgctcccctg 399 Query: 384 cgacgagg 391 |||||||| Sbjct: 400 cgacgagg 407