BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121m23 (1036 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073516.1| Oryza sativa (japonica cultivar-group) Os12g... 496 e-136 dbj|AK060492.1| Oryza sativa (japonica cultivar-group) cDNA clon... 496 e-136 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 260 1e-65 emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa... 260 1e-65 gb|AY111008.1| Zea mays CL30631_-2 mRNA sequence 137 1e-28 >ref|NM_001073516.1| Oryza sativa (japonica cultivar-group) Os12g0552700 (Os12g0552700) mRNA, complete cds Length = 1705 Score = 496 bits (250), Expect = e-136 Identities = 586/698 (83%) Strand = Plus / Plus Query: 34 ttgcagcgcttggcaaagtgctcagaactgctaatattaaaacttggcctgtgctcaagc 93 ||||||| |||||| |||||||| |||||||| || | ||| | |||||||||||||| Sbjct: 430 ttgcagcacttggccaagtgctctgaactgcttgtactgaaattaggcctgtgctcaagt 489 Query: 94 atttctgacaaaggacttgcatatgttagttcaaactgtggaaagatcgtggaacttgat 153 |||||||||||||| ||||| | | | ||||||| |||||||||| | | || |||||| Sbjct: 490 atttctgacaaaggtcttgcttttatcagttcaagctgtggaaagctgattgagcttgat 549 Query: 154 ctatatcgttgcagtgctattactgatgatgggctggcagctttagctagtggctgcaag 213 || ||||| |||| | ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 550 ctctatcgctgcaattctattaccgatgatgggctggcagctttagctaatggctgcaag 609 Query: 214 aagatcaagatgctaaacctgtgctactgcacccaaatcactgataatggtttgaagcat 273 ||||| |||||||||||||| |||||||||| | | || || || | ||||||| || Sbjct: 610 aagattaagatgctaaacctatgctactgcaacaagattaccgacagtggtttgggccac 669 Query: 274 gtaagctctctggaagaactcacaaaccttgagttgagatgtctggtgcgcatcacaggc 333 || ||||||| || || |||||||||||||| |||| || |||| || || ||||| Sbjct: 670 ctaggctctctagaggagctcacaaaccttgaactgaggtgcttggtccgtataacaggt 729 Query: 334 attggaatcacctccattgccattggttgcacaagcctgatagaactagacttgaagcgc 393 ||||||||| | || ||||||| || |||| | ||||||||| ||||||||||||| Sbjct: 730 attggaatctcatcagttgccatcggctgcaagaacctgatagagatagacttgaagcgt 789 Query: 394 tgttattctgtggatgatgctggcctgtgggctcttgccagatactctcaaaacctcaga 453 || |||||||| |||||||||||| |||||||||||||| |||| | | |||||| ||| Sbjct: 790 tgctattctgtcgatgatgctggcttgtgggctcttgcccgatatgcactaaaccttaga 849 Query: 454 caacttacaatatcatactgccaagtcacaggtttgggcctgtgccgtctgctgagctcc 513 || ||||| |||||||||||||||||||| || |||||||||| | ||| | |||||| Sbjct: 850 cagcttactatatcatactgccaagtcactggcctgggcctgtgtcacctgttaagctcc 909 Query: 514 ctgaggtgccttcaggatgtgaagatggttcacctctcctgggtctccattgaagggttc 573 ||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 910 ctgaggtgcctccaggatgttaagatggtacacctctcatgggtctctatagaagggttc 969 Query: 574 gagatggcgctgcgagctgcttgtggaaggctgaagaagctgaagttgctcggtgggttg 633 |||||||| ||| |||| ||||| || ||||||||||| |||||| |||| ||||| || Sbjct: 970 gagatggcactgagagcggcttgcgggaggctgaagaaactgaagatgctgagtgggctg 1029 Query: 634 aagttagtgctttcccctgagctgcttcagatgctgcaggcctgtggctgccgcgtccgg 693 |||| ||||| || ||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1030 aagtctgtgctgtctcctgagctgctccagatgctgcaggcctgcggctgccgcatccgt 1089 Query: 694 tgggtcaacaagcctctcgtctacaagggctgaacctg 731 ||||||||||||||||| |||||||||| || |||||| Sbjct: 1090 tgggtcaacaagcctcttgtctacaaggactaaacctg 1127 >dbj|AK060492.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C10, full insert sequence Length = 1723 Score = 496 bits (250), Expect = e-136 Identities = 586/698 (83%) Strand = Plus / Plus Query: 34 ttgcagcgcttggcaaagtgctcagaactgctaatattaaaacttggcctgtgctcaagc 93 ||||||| |||||| |||||||| |||||||| || | ||| | |||||||||||||| Sbjct: 448 ttgcagcacttggccaagtgctctgaactgcttgtactgaaattaggcctgtgctcaagt 507 Query: 94 atttctgacaaaggacttgcatatgttagttcaaactgtggaaagatcgtggaacttgat 153 |||||||||||||| ||||| | | | ||||||| |||||||||| | | || |||||| Sbjct: 508 atttctgacaaaggtcttgcttttatcagttcaagctgtggaaagctgattgagcttgat 567 Query: 154 ctatatcgttgcagtgctattactgatgatgggctggcagctttagctagtggctgcaag 213 || ||||| |||| | ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 568 ctctatcgctgcaattctattaccgatgatgggctggcagctttagctaatggctgcaag 627 Query: 214 aagatcaagatgctaaacctgtgctactgcacccaaatcactgataatggtttgaagcat 273 ||||| |||||||||||||| |||||||||| | | || || || | ||||||| || Sbjct: 628 aagattaagatgctaaacctatgctactgcaacaagattaccgacagtggtttgggccac 687 Query: 274 gtaagctctctggaagaactcacaaaccttgagttgagatgtctggtgcgcatcacaggc 333 || ||||||| || || |||||||||||||| |||| || |||| || || ||||| Sbjct: 688 ctaggctctctagaggagctcacaaaccttgaactgaggtgcttggtccgtataacaggt 747 Query: 334 attggaatcacctccattgccattggttgcacaagcctgatagaactagacttgaagcgc 393 ||||||||| | || ||||||| || |||| | ||||||||| ||||||||||||| Sbjct: 748 attggaatctcatcagttgccatcggctgcaagaacctgatagagatagacttgaagcgt 807 Query: 394 tgttattctgtggatgatgctggcctgtgggctcttgccagatactctcaaaacctcaga 453 || |||||||| |||||||||||| |||||||||||||| |||| | | |||||| ||| Sbjct: 808 tgctattctgtcgatgatgctggcttgtgggctcttgcccgatatgcactaaaccttaga 867 Query: 454 caacttacaatatcatactgccaagtcacaggtttgggcctgtgccgtctgctgagctcc 513 || ||||| |||||||||||||||||||| || |||||||||| | ||| | |||||| Sbjct: 868 cagcttactatatcatactgccaagtcactggcctgggcctgtgtcacctgttaagctcc 927 Query: 514 ctgaggtgccttcaggatgtgaagatggttcacctctcctgggtctccattgaagggttc 573 ||||||||||| |||||||| |||||||| |||||||| |||||||| || ||||||||| Sbjct: 928 ctgaggtgcctccaggatgttaagatggtacacctctcatgggtctctatagaagggttc 987 Query: 574 gagatggcgctgcgagctgcttgtggaaggctgaagaagctgaagttgctcggtgggttg 633 |||||||| ||| |||| ||||| || ||||||||||| |||||| |||| ||||| || Sbjct: 988 gagatggcactgagagcggcttgcgggaggctgaagaaactgaagatgctgagtgggctg 1047 Query: 634 aagttagtgctttcccctgagctgcttcagatgctgcaggcctgtggctgccgcgtccgg 693 |||| ||||| || ||||||||||| ||||||||||||||||| ||||||||| |||| Sbjct: 1048 aagtctgtgctgtctcctgagctgctccagatgctgcaggcctgcggctgccgcatccgt 1107 Query: 694 tgggtcaacaagcctctcgtctacaagggctgaacctg 731 ||||||||||||||||| |||||||||| || |||||| Sbjct: 1108 tgggtcaacaagcctcttgtctacaaggactaaacctg 1145 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 260 bits (131), Expect = 1e-65 Identities = 239/275 (86%) Strand = Plus / Plus Query: 457 cttacaatatcatactgccaagtcacaggtttgggcctgtgccgtctgctgagctccctg 516 ||||| |||||||||||||||||||| || |||||||||| | ||| | ||||||||| Sbjct: 22494736 cttactatatcatactgccaagtcactggcctgggcctgtgtcacctgttaagctccctg 22494795 Query: 517 aggtgccttcaggatgtgaagatggttcacctctcctgggtctccattgaagggttcgag 576 |||||||| |||||||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 22494796 aggtgcctccaggatgttaagatggtacacctctcatgggtctctatagaagggttcgag 22494855 Query: 577 atggcgctgcgagctgcttgtggaaggctgaagaagctgaagttgctcggtgggttgaag 636 ||||| ||| |||| ||||| || ||||||||||| |||||| |||| ||||| ||||| Sbjct: 22494856 atggcactgagagcggcttgcgggaggctgaagaaactgaagatgctgagtgggctgaag 22494915 Query: 637 ttagtgctttcccctgagctgcttcagatgctgcaggcctgtggctgccgcgtccggtgg 696 | ||||| || ||||||||||| ||||||||||||||||| ||||||||| |||| ||| Sbjct: 22494916 tctgtgctgtctcctgagctgctccagatgctgcaggcctgcggctgccgcatccgttgg 22494975 Query: 697 gtcaacaagcctctcgtctacaagggctgaacctg 731 |||||||||||||| |||||||||| || |||||| Sbjct: 22494976 gtcaacaagcctcttgtctacaaggactaaacctg 22495010 Score = 174 bits (88), Expect = 5e-40 Identities = 223/268 (83%) Strand = Plus / Plus Query: 170 ctattactgatgatgggctggcagctttagctagtggctgcaagaagatcaagatgctaa 229 ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 22494366 ctattaccgatgatgggctggcagctttagctaatggctgcaagaagattaagatgctaa 22494425 Query: 230 acctgtgctactgcacccaaatcactgataatggtttgaagcatgtaagctctctggaag 289 |||| |||||||||| | | || || || | ||||||| || || ||||||| || | Sbjct: 22494426 acctatgctactgcaacaagattaccgacagtggtttgggccacctaggctctctagagg 22494485 Query: 290 aactcacaaaccttgagttgagatgtctggtgcgcatcacaggcattggaatcacctcca 349 | |||||||||||||| |||| || |||| || || ||||| ||||||||| | || Sbjct: 22494486 agctcacaaaccttgaactgaggtgcttggtccgtataacaggtattggaatctcatcag 22494545 Query: 350 ttgccattggttgcacaagcctgatagaactagacttgaagcgctgttattctgtggatg 409 ||||||| || |||| | ||||||||| ||||||||||||| || |||||||| |||| Sbjct: 22494546 ttgccatcggctgcaagaacctgatagagatagacttgaagcgttgctattctgtcgatg 22494605 Query: 410 atgctggcctgtgggctcttgccagata 437 |||||||| |||||||||||||| |||| Sbjct: 22494606 atgctggcttgtgggctcttgcccgata 22494633 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Plus Query: 34 ttgcagcgcttggcaaagtgctcagaactgctaatattaaaacttggcctgtgctcaagc 93 ||||||| |||||| |||||||| |||||||| || | ||| | |||||||||||||| Sbjct: 22494146 ttgcagcacttggccaagtgctctgaactgcttgtactgaaattaggcctgtgctcaagt 22494205 Query: 94 atttctgacaaaggacttgcatatgttagttcaaactgtggaaag 138 |||||||||||||| ||||| | | | ||||||| |||||||||| Sbjct: 22494206 atttctgacaaaggtcttgcttttatcagttcaagctgtggaaag 22494250 >emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 260 bits (131), Expect = 1e-65 Identities = 239/275 (86%) Strand = Plus / Minus Query: 457 cttacaatatcatactgccaagtcacaggtttgggcctgtgccgtctgctgagctccctg 516 ||||| |||||||||||||||||||| || |||||||||| | ||| | ||||||||| Sbjct: 12798 cttactatatcatactgccaagtcactggcctgggcctgtgtcacctgttaagctccctg 12739 Query: 517 aggtgccttcaggatgtgaagatggttcacctctcctgggtctccattgaagggttcgag 576 |||||||| |||||||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 12738 aggtgcctccaggatgttaagatggtacacctctcatgggtctctatagaagggttcgag 12679 Query: 577 atggcgctgcgagctgcttgtggaaggctgaagaagctgaagttgctcggtgggttgaag 636 ||||| ||| |||| ||||| || ||||||||||| |||||| |||| ||||| ||||| Sbjct: 12678 atggcactgagagcggcttgcgggaggctgaagaaactgaagatgctgagtgggctgaag 12619 Query: 637 ttagtgctttcccctgagctgcttcagatgctgcaggcctgtggctgccgcgtccggtgg 696 | ||||| || ||||||||||| ||||||||||||||||| ||||||||| |||| ||| Sbjct: 12618 tctgtgctgtctcctgagctgctccagatgctgcaggcctgcggctgccgcatccgttgg 12559 Query: 697 gtcaacaagcctctcgtctacaagggctgaacctg 731 |||||||||||||| |||||||||| || |||||| Sbjct: 12558 gtcaacaagcctcttgtctacaaggactaaacctg 12524 Score = 174 bits (88), Expect = 5e-40 Identities = 223/268 (83%) Strand = Plus / Minus Query: 170 ctattactgatgatgggctggcagctttagctagtggctgcaagaagatcaagatgctaa 229 ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 13168 ctattaccgatgatgggctggcagctttagctaatggctgcaagaagattaagatgctaa 13109 Query: 230 acctgtgctactgcacccaaatcactgataatggtttgaagcatgtaagctctctggaag 289 |||| |||||||||| | | || || || | ||||||| || || ||||||| || | Sbjct: 13108 acctatgctactgcaacaagattaccgacagtggtttgggccacctaggctctctagagg 13049 Query: 290 aactcacaaaccttgagttgagatgtctggtgcgcatcacaggcattggaatcacctcca 349 | |||||||||||||| |||| || |||| || || ||||| ||||||||| | || Sbjct: 13048 agctcacaaaccttgaactgaggtgcttggtccgtataacaggtattggaatctcatcag 12989 Query: 350 ttgccattggttgcacaagcctgatagaactagacttgaagcgctgttattctgtggatg 409 ||||||| || |||| | ||||||||| ||||||||||||| || |||||||| |||| Sbjct: 12988 ttgccatcggctgcaagaacctgatagagatagacttgaagcgttgctattctgtcgatg 12929 Query: 410 atgctggcctgtgggctcttgccagata 437 |||||||| |||||||||||||| |||| Sbjct: 12928 atgctggcttgtgggctcttgcccgata 12901 Score = 81.8 bits (41), Expect = 5e-12 Identities = 89/105 (84%) Strand = Plus / Minus Query: 34 ttgcagcgcttggcaaagtgctcagaactgctaatattaaaacttggcctgtgctcaagc 93 ||||||| |||||| |||||||| |||||||| || | ||| | |||||||||||||| Sbjct: 13388 ttgcagcacttggccaagtgctctgaactgcttgtactgaaattaggcctgtgctcaagt 13329 Query: 94 atttctgacaaaggacttgcatatgttagttcaaactgtggaaag 138 |||||||||||||| ||||| | | | ||||||| |||||||||| Sbjct: 13328 atttctgacaaaggtcttgcttttatcagttcaagctgtggaaag 13284 >gb|AY111008.1| Zea mays CL30631_-2 mRNA sequence Length = 548 Score = 137 bits (69), Expect = 1e-28 Identities = 144/169 (85%) Strand = Plus / Minus Query: 553 tgggtctccattgaagggttcgagatggcgctgcgagctgcttgtggaaggctgaagaag 612 |||||||| || |||||||| |||||||| |||||||| || || || |||||||||||| Sbjct: 548 tgggtctcaatagaagggtttgagatggctctgcgagcagcctgcgggaggctgaagaag 489 Query: 613 ctgaagttgctcggtgggttgaagttagtgctttcccctgagctgcttcagatgctgcag 672 |||||| ||||| | ||| ||||| ||||| ||||||||||| || |||||||||||| Sbjct: 488 ctgaagatgctctgcgggctgaagaccgtgctctcccctgagctcctccagatgctgcag 429 Query: 673 gcctgtggctgccgcgtccggtgggtcaacaagcctctcgtctacaagg 721 || ||||||||||| | | ||||||||||||||||| |||||||||| Sbjct: 428 gcttgtggctgccgaataagatgggtcaacaagcctcttgtctacaagg 380