BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121m10 (1003 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001049976.1| Oryza sativa (japonica cultivar-group) Os01g... 389 e-104 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 389 e-104 dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D... 389 e-104 ref|NM_001050606.1| Oryza sativa (japonica cultivar-group) Os01g... 82 5e-12 dbj|AK101454.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 5e-12 >ref|NM_001049976.1| Oryza sativa (japonica cultivar-group) Os01g0589200 (Os01g0589200) mRNA, complete cds Length = 1116 Score = 389 bits (196), Expect = e-104 Identities = 308/343 (89%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 195 gagcactacgacagcgtgctggccacggacgtgagcgcggagcagctgcagcacaccgtc 254 |||||||||||||||||| |||| ||||||||||||||||||||||||| || | |||| Sbjct: 376 gagcactacgacagcgtggtggcgacggacgtgagcgcggagcagctgcggcgcgccgtg 435 Query: 255 ccgcacccgaaggtccggtacctccacacccccgacgccac-gcc--cggggacgacctc 311 ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 436 ccgcacccgaaggtccggtacctccacacccccgacgccggtgccgacgacgacgacctc 495 Query: 312 gtcgatgcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggtgcac 371 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 496 gtcgcggcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggcgcac 555 Query: 372 tggttcgacctcccaacgttctacggcgtcgccaaccgggtcctgcggaagcccggcggg 431 |||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||| Sbjct: 556 tggttcgacctcccggcgttctacggcgccgcgcggcggctcctgcggaagcccggcggc 615 Query: 432 gtcatcgcggtctggggctacaactaccgcgtcagcccgatagaggacatgatggcgcgc 491 || |||||||||||||| |||||||||||||||||||| | |||||||||||| | ||| Sbjct: 616 gtgatcgcggtctgggggtacaactaccgcgtcagccccgtggaggacatgatgtcccgc 675 Query: 492 ttcctccacaccaccctgccttactgggactcccgggctcggt 534 |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 676 ttcctccacaccaccctgccctactgggactccagagctcggt 718 Score = 303 bits (153), Expect = 7e-79 Identities = 234/261 (89%) Strand = Plus / Plus Query: 543 gacgggtaccggaacctgccgttcccgttcgacgacgtcggcctcgggagagagggagag 602 |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 832 gacgggtaccgggacctgccgttcccgttcgacggcgtcggcctcgggaaggagggcgag 891 Query: 603 cctgcgggcctcgacatggagcacgagatgtcgttcgcggggctcgtcggcatgctgagg 662 || |||||| |||||||||||||||||||| ||||| |||| |||||| | ||||||||| Sbjct: 892 ccggcgggcttcgacatggagcacgagatggcgttcccgggcctcgtccgaatgctgagg 951 Query: 663 tcgtggtcggcggtgacgacggcgaggcagcagggcgtcgacctgctggacgagcgcgcg 722 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| | Sbjct: 952 tcgtggtcggcggtggcgacggcgaggcagcggggcgtggacctgctggacgagcgcgtg 1011 Query: 723 gtgaaggagctggaggaagagtggggaggggcgtcgctgatccgcaaggtgacctacaag 782 |||| | |||||||||||||||||| || ||||||||| |||||||||| |||| |||| Sbjct: 1012 gtgaggcggctggaggaagagtggggtggcgcgtcgctggtccgcaaggtcaccttcaag 1071 Query: 783 gccttcctgctggcaggcacc 803 || |||||||| || |||||| Sbjct: 1072 gcgttcctgcttgccggcacc 1092 Score = 180 bits (91), Expect = 7e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 35 ccggatggctgggctgttcaccaagcaggctgctgtctacgccgcggcacggccggtcta 94 ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| Sbjct: 112 ccggatggctgggctgttcaccaggcaggctgccgagtacgccgcggcgcggccggtcta 171 Query: 95 cccgaaagatctgttcgccaagctagcggcgctcaccgcacaccgcagcctcgcctggga 154 ||| || || ||||||| |||||| ||| |||||||||| |||| | || |||||||||| Sbjct: 172 ccccaaggacctgttcgtcaagctcgcgtcgctcaccgcccaccaccgcgtcgcctggga 231 Query: 155 cgtcggcaccggcaatggccaggccgccatc 185 ||||||||||||||||||||||||||||||| Sbjct: 232 cgtcggcaccggcaatggccaggccgccatc 262 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 389 bits (196), Expect = e-104 Identities = 308/343 (89%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 195 gagcactacgacagcgtgctggccacggacgtgagcgcggagcagctgcagcacaccgtc 254 |||||||||||||||||| |||| ||||||||||||||||||||||||| || | |||| Sbjct: 22983152 gagcactacgacagcgtggtggcgacggacgtgagcgcggagcagctgcggcgcgccgtg 22983211 Query: 255 ccgcacccgaaggtccggtacctccacacccccgacgccac-gcc--cggggacgacctc 311 ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 22983212 ccgcacccgaaggtccggtacctccacacccccgacgccggtgccgacgacgacgacctc 22983271 Query: 312 gtcgatgcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggtgcac 371 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 22983272 gtcgcggcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggcgcac 22983331 Query: 372 tggttcgacctcccaacgttctacggcgtcgccaaccgggtcctgcggaagcccggcggg 431 |||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||| Sbjct: 22983332 tggttcgacctcccggcgttctacggcgccgcgcggcggctcctgcggaagcccggcggc 22983391 Query: 432 gtcatcgcggtctggggctacaactaccgcgtcagcccgatagaggacatgatggcgcgc 491 || |||||||||||||| |||||||||||||||||||| | |||||||||||| | ||| Sbjct: 22983392 gtgatcgcggtctgggggtacaactaccgcgtcagccccgtggaggacatgatgtcccgc 22983451 Query: 492 ttcctccacaccaccctgccttactgggactcccgggctcggt 534 |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 22983452 ttcctccacaccaccctgccctactgggactccagagctcggt 22983494 Score = 303 bits (153), Expect = 7e-79 Identities = 234/261 (89%) Strand = Plus / Plus Query: 543 gacgggtaccggaacctgccgttcccgttcgacgacgtcggcctcgggagagagggagag 602 |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 22983608 gacgggtaccgggacctgccgttcccgttcgacggcgtcggcctcgggaaggagggcgag 22983667 Query: 603 cctgcgggcctcgacatggagcacgagatgtcgttcgcggggctcgtcggcatgctgagg 662 || |||||| |||||||||||||||||||| ||||| |||| |||||| | ||||||||| Sbjct: 22983668 ccggcgggcttcgacatggagcacgagatggcgttcccgggcctcgtccgaatgctgagg 22983727 Query: 663 tcgtggtcggcggtgacgacggcgaggcagcagggcgtcgacctgctggacgagcgcgcg 722 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| | Sbjct: 22983728 tcgtggtcggcggtggcgacggcgaggcagcggggcgtggacctgctggacgagcgcgtg 22983787 Query: 723 gtgaaggagctggaggaagagtggggaggggcgtcgctgatccgcaaggtgacctacaag 782 |||| | |||||||||||||||||| || ||||||||| |||||||||| |||| |||| Sbjct: 22983788 gtgaggcggctggaggaagagtggggtggcgcgtcgctggtccgcaaggtcaccttcaag 22983847 Query: 783 gccttcctgctggcaggcacc 803 || |||||||| || |||||| Sbjct: 22983848 gcgttcctgcttgccggcacc 22983868 Score = 180 bits (91), Expect = 7e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 35 ccggatggctgggctgttcaccaagcaggctgctgtctacgccgcggcacggccggtcta 94 ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| Sbjct: 22982888 ccggatggctgggctgttcaccaggcaggctgccgagtacgccgcggcgcggccggtcta 22982947 Query: 95 cccgaaagatctgttcgccaagctagcggcgctcaccgcacaccgcagcctcgcctggga 154 ||| || || ||||||| |||||| ||| |||||||||| |||| | || |||||||||| Sbjct: 22982948 ccccaaggacctgttcgtcaagctcgcgtcgctcaccgcccaccaccgcgtcgcctggga 22983007 Query: 155 cgtcggcaccggcaatggccaggccgccatc 185 ||||||||||||||||||||||||||||||| Sbjct: 22983008 cgtcggcaccggcaatggccaggccgccatc 22983038 >dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 389 bits (196), Expect = e-104 Identities = 308/343 (89%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 195 gagcactacgacagcgtgctggccacggacgtgagcgcggagcagctgcagcacaccgtc 254 |||||||||||||||||| |||| ||||||||||||||||||||||||| || | |||| Sbjct: 53558 gagcactacgacagcgtggtggcgacggacgtgagcgcggagcagctgcggcgcgccgtg 53617 Query: 255 ccgcacccgaaggtccggtacctccacacccccgacgccac-gcc--cggggacgacctc 311 ||||||||||||||||||||||||||||||||||||||| ||| || ||||||||| Sbjct: 53618 ccgcacccgaaggtccggtacctccacacccccgacgccggtgccgacgacgacgacctc 53677 Query: 312 gtcgatgcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggtgcac 371 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 53678 gtcgcggcgctcggcggcgagggctgcgtcgacctcatcacggtggccgaggcggcgcac 53737 Query: 372 tggttcgacctcccaacgttctacggcgtcgccaaccgggtcctgcggaagcccggcggg 431 |||||||||||||| |||||||||||| ||| ||| ||||||||||||||||||| Sbjct: 53738 tggttcgacctcccggcgttctacggcgccgcgcggcggctcctgcggaagcccggcggc 53797 Query: 432 gtcatcgcggtctggggctacaactaccgcgtcagcccgatagaggacatgatggcgcgc 491 || |||||||||||||| |||||||||||||||||||| | |||||||||||| | ||| Sbjct: 53798 gtgatcgcggtctgggggtacaactaccgcgtcagccccgtggaggacatgatgtcccgc 53857 Query: 492 ttcctccacaccaccctgccttactgggactcccgggctcggt 534 |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 53858 ttcctccacaccaccctgccctactgggactccagagctcggt 53900 Score = 303 bits (153), Expect = 7e-79 Identities = 234/261 (89%) Strand = Plus / Plus Query: 543 gacgggtaccggaacctgccgttcccgttcgacgacgtcggcctcgggagagagggagag 602 |||||||||||| ||||||||||||||||||||| |||||||||||||| ||||| ||| Sbjct: 54014 gacgggtaccgggacctgccgttcccgttcgacggcgtcggcctcgggaaggagggcgag 54073 Query: 603 cctgcgggcctcgacatggagcacgagatgtcgttcgcggggctcgtcggcatgctgagg 662 || |||||| |||||||||||||||||||| ||||| |||| |||||| | ||||||||| Sbjct: 54074 ccggcgggcttcgacatggagcacgagatggcgttcccgggcctcgtccgaatgctgagg 54133 Query: 663 tcgtggtcggcggtgacgacggcgaggcagcagggcgtcgacctgctggacgagcgcgcg 722 ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||| | Sbjct: 54134 tcgtggtcggcggtggcgacggcgaggcagcggggcgtggacctgctggacgagcgcgtg 54193 Query: 723 gtgaaggagctggaggaagagtggggaggggcgtcgctgatccgcaaggtgacctacaag 782 |||| | |||||||||||||||||| || ||||||||| |||||||||| |||| |||| Sbjct: 54194 gtgaggcggctggaggaagagtggggtggcgcgtcgctggtccgcaaggtcaccttcaag 54253 Query: 783 gccttcctgctggcaggcacc 803 || |||||||| || |||||| Sbjct: 54254 gcgttcctgcttgccggcacc 54274 Score = 180 bits (91), Expect = 7e-42 Identities = 136/151 (90%) Strand = Plus / Plus Query: 35 ccggatggctgggctgttcaccaagcaggctgctgtctacgccgcggcacggccggtcta 94 ||||||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| Sbjct: 53294 ccggatggctgggctgttcaccaggcaggctgccgagtacgccgcggcgcggccggtcta 53353 Query: 95 cccgaaagatctgttcgccaagctagcggcgctcaccgcacaccgcagcctcgcctggga 154 ||| || || ||||||| |||||| ||| |||||||||| |||| | || |||||||||| Sbjct: 53354 ccccaaggacctgttcgtcaagctcgcgtcgctcaccgcccaccaccgcgtcgcctggga 53413 Query: 155 cgtcggcaccggcaatggccaggccgccatc 185 ||||||||||||||||||||||||||||||| Sbjct: 53414 cgtcggcaccggcaatggccaggccgccatc 53444 >ref|NM_001050606.1| Oryza sativa (japonica cultivar-group) Os01g0716500 (Os01g0716500) mRNA, complete cds Length = 1046 Score = 81.8 bits (41), Expect = 5e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 146 cgcctgggacgtcggcaccggcaatggccaggccgccatcagtgttgcagagcactacga 205 ||||||||||| |||| ||||| ||||||||| ||||||| | || ||||||||||| Sbjct: 175 cgcctgggacgccggctgcggcaccggccaggcctccatcagcatcgcggagcactacga 234 Query: 206 cagcgtgctggccacggacgtgagcgcggagcagctgcagcacaccgtcccgcacccgaa 265 ||||||| | || ||||||| ||||| || |||| | | ||| ||||| ||||||| || Sbjct: 235 cagcgtggtcgcgacggacgcgagcgaggggcagatccgccacgccgtcgcgcaccccaa 294 Query: 266 ggtccggtacctccacacccc 286 ||| |||||||| |||||||| Sbjct: 295 ggtgcggtacctgcacacccc 315 >dbj|AK101454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A11, full insert sequence Length = 1048 Score = 81.8 bits (41), Expect = 5e-12 Identities = 116/141 (82%) Strand = Plus / Plus Query: 146 cgcctgggacgtcggcaccggcaatggccaggccgccatcagtgttgcagagcactacga 205 ||||||||||| |||| ||||| ||||||||| ||||||| | || ||||||||||| Sbjct: 177 cgcctgggacgccggctgcggcaccggccaggcctccatcagcatcgcggagcactacga 236 Query: 206 cagcgtgctggccacggacgtgagcgcggagcagctgcagcacaccgtcccgcacccgaa 265 ||||||| | || ||||||| ||||| || |||| | | ||| ||||| ||||||| || Sbjct: 237 cagcgtggtcgcgacggacgcgagcgaggggcagatccgccacgccgtcgcgcaccccaa 296 Query: 266 ggtccggtacctccacacccc 286 ||| |||||||| |||||||| Sbjct: 297 ggtgcggtacctgcacacccc 317