BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem121m06
         (1241 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g...   210   1e-50
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...   186   1e-43
dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic D...   186   1e-43
dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D...   186   1e-43
gb|AF502250.1| Triticum aestivum HMG-I/Y protein HMGa (HMGa) gen...   180   9e-42

>ref|NM_001068385.1| Oryza sativa (japonica cultivar-group) Os08g0428800 (Os08g0428800)
           mRNA, complete cds
          Length = 1416

 Score =  210 bits (106), Expect = 1e-50
 Identities = 217/254 (85%)
 Strand = Plus / Plus

                                                                       
Query: 172 ctcccgccctaccccgagatgattcttgcggcgatcgaggcgctggacgacaagaacggc 231
           |||||||||||||| |||||||| || ||||||||||||| |||| |||| |||| ||| 
Sbjct: 37  ctcccgccctacccggagatgatactggcggcgatcgaggggctgaacgagaagagcggg 96

                                                                       
Query: 232 tccagcaagtcggcgatctcgagctacatcgagggcaagtacggcgacctccccccggcg 291
           || | ||||||||||||||| |  | ||||||||| |||||||| ||||| || ||||||
Sbjct: 97  tcgaacaagtcggcgatctccaagttcatcgaggggaagtacggggacctgccgccggcg 156

                                                                       
Query: 292 catgcatccctcctcacggcacacctcgcccgcatgaaggaggccggcgagctcgtcttc 351
           || || || || |||||||| ||||| ||| | ||||||||| |||| |||||| |||||
Sbjct: 157 cacgcgtcgctgctcacggcgcacctggccaggatgaaggagtccggtgagctcatcttc 216

                                                                       
Query: 352 tccaataacaactacttccgcgccgacgcccccggcgcgccgcccaagcgcggacgcggc 411
             ||| ||||||||||||||||||||||| |||| |||||||||||||||||| || |||
Sbjct: 217 ctcaagaacaactacttccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggc 276

                         
Query: 412 cgcccgcccaagcc 425
           ||||| ||||||||
Sbjct: 277 cgcccccccaagcc 290



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 46/48 (95%)
 Strand = Plus / Plus

                                                           
Query: 470 cctccccgccgcgcccccgcggccgcccgcccaagcccaaggacccca 517
           ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 326 cctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacccca 373


>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score =  186 bits (94), Expect = 1e-43
 Identities = 202/238 (84%)
 Strand = Plus / Minus

                                                                            
Query: 188      agatgattcttgcggcgatcgaggcgctggacgacaagaacggctccagcaagtcggcga 247
                ||||||| || ||||||||||||| |||| |||| |||| ||| || | |||||||||||
Sbjct: 20650572 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 20650513

                                                                            
Query: 248      tctcgagctacatcgagggcaagtacggcgacctccccccggcgcatgcatccctcctca 307
                |||| |  | ||||||||| |||||||| ||||| || |||||||| || || || ||||
Sbjct: 20650512 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 20650453

                                                                            
Query: 308      cggcacacctcgcccgcatgaaggaggccggcgagctcgtcttctccaataacaactact 367
                |||| ||||| ||| | ||||||||| |||| |||||| |||||  ||| ||||||||||
Sbjct: 20650452 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 20650393

                                                                          
Query: 368      tccgcgccgacgcccccggcgcgccgcccaagcgcggacgcggccgcccgcccaagcc 425
                ||||||||||||| |||| |||||||||||||||||| || |||||||| ||||||||
Sbjct: 20650392 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagcc 20650335



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                                
Query: 470      cctccccgccgcgcccccgcggccgcccgcccaagcccaaggacccca 517
                ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 20650299 cctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacccca 20650252


>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1663_D06
          Length = 139103

 Score =  186 bits (94), Expect = 1e-43
 Identities = 202/238 (84%)
 Strand = Plus / Minus

                                                                          
Query: 188    agatgattcttgcggcgatcgaggcgctggacgacaagaacggctccagcaagtcggcga 247
              ||||||| || ||||||||||||| |||| |||| |||| ||| || | |||||||||||
Sbjct: 124944 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 124885

                                                                          
Query: 248    tctcgagctacatcgagggcaagtacggcgacctccccccggcgcatgcatccctcctca 307
              |||| |  | ||||||||| |||||||| ||||| || |||||||| || || || ||||
Sbjct: 124884 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 124825

                                                                          
Query: 308    cggcacacctcgcccgcatgaaggaggccggcgagctcgtcttctccaataacaactact 367
              |||| ||||| ||| | ||||||||| |||| |||||| |||||  ||| ||||||||||
Sbjct: 124824 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 124765

                                                                        
Query: 368    tccgcgccgacgcccccggcgcgccgcccaagcgcggacgcggccgcccgcccaagcc 425
              ||||||||||||| |||| |||||||||||||||||| || |||||||| ||||||||
Sbjct: 124764 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagcc 124707



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                              
Query: 470    cctccccgccgcgcccccgcggccgcccgcccaagcccaaggacccca 517
              ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 124671 cctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacccca 124624


>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C08
          Length = 152460

 Score =  186 bits (94), Expect = 1e-43
 Identities = 202/238 (84%)
 Strand = Plus / Minus

                                                                         
Query: 188   agatgattcttgcggcgatcgaggcgctggacgacaagaacggctccagcaagtcggcga 247
             ||||||| || ||||||||||||| |||| |||| |||| ||| || | |||||||||||
Sbjct: 23025 agatgatactggcggcgatcgaggggctgaacgagaagagcgggtcgaacaagtcggcga 22966

                                                                         
Query: 248   tctcgagctacatcgagggcaagtacggcgacctccccccggcgcatgcatccctcctca 307
             |||| |  | ||||||||| |||||||| ||||| || |||||||| || || || ||||
Sbjct: 22965 tctccaagttcatcgaggggaagtacggggacctgccgccggcgcacgcgtcgctgctca 22906

                                                                         
Query: 308   cggcacacctcgcccgcatgaaggaggccggcgagctcgtcttctccaataacaactact 367
             |||| ||||| ||| | ||||||||| |||| |||||| |||||  ||| ||||||||||
Sbjct: 22905 cggcgcacctggccaggatgaaggagtccggtgagctcatcttcctcaagaacaactact 22846

                                                                       
Query: 368   tccgcgccgacgcccccggcgcgccgcccaagcgcggacgcggccgcccgcccaagcc 425
             ||||||||||||| |||| |||||||||||||||||| || |||||||| ||||||||
Sbjct: 22845 tccgcgccgacgcgcccgacgcgccgcccaagcgcggccggggccgcccccccaagcc 22788



 Score = 79.8 bits (40), Expect = 2e-11
 Identities = 46/48 (95%)
 Strand = Plus / Minus

                                                             
Query: 470   cctccccgccgcgcccccgcggccgcccgcccaagcccaaggacccca 517
             ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 22752 cctcctcgccgcgcccccgcggccgcccgcccaagtccaaggacccca 22705


>gb|AF502250.1| Triticum aestivum HMG-I/Y protein HMGa (HMGa) gene, complete cds
          Length = 989

 Score =  180 bits (91), Expect = 9e-42
 Identities = 157/179 (87%)
 Strand = Plus / Plus

                                                                       
Query: 188 agatgattcttgcggcgatcgaggcgctggacgacaagaacggctccagcaagtcggcga 247
           |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct: 236 agatgattctcgcggcgatcgaggcgctgggcgacaagaacggctcgagcaagtcggcca 295

                                                                       
Query: 248 tctcgagctacatcgagggcaagtacggcgacctccccccggcgcatgcatccctcctca 307
           |||| |||||||||||||  |||||||  | ||| ||| | ||||| || ||||||||||
Sbjct: 296 tctccagctacatcgaggagaagtacgagggccttccctccgcgcacgcctccctcctca 355

                                                                      
Query: 308 cggcacacctcgcccgcatgaaggaggccggcgagctcgtcttctccaataacaactac 366
           ||||  |||||||| ||||||||||||||||| |||||| |||| |||| |||||||||
Sbjct: 356 cggccaacctcgccagcatgaaggaggccggcaagctcgccttcgccaagaacaactac 414