BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121f24 (1111 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK243244.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 327 6e-86 ref|NM_001073289.1| Oryza sativa (japonica cultivar-group) Os12g... 327 6e-86 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 182 2e-42 emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa... 182 2e-42 emb|CT829369.1| Oryza sativa (indica cultivar-group) cDNA clone:... 90 2e-14 >dbj|AK243244.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100046N20, full insert sequence Length = 1205 Score = 327 bits (165), Expect = 6e-86 Identities = 246/273 (90%) Strand = Plus / Plus Query: 191 gctgccgccggggttccggttccgccccaccgacgaggagctggtcgtgcactacctccg 250 |||||||||||||||| ||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 147 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 206 Query: 251 ccgccgcgcgctcgcctcgccgctccccgccgccgtcgatatccccgacgtccgccttct 310 |||||||||||||| ||| || ||||| |||||||||| |||||||| |||||||| || Sbjct: 207 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 266 Query: 311 ggcccacgacccctccgacctcctgcccccagggtggagtgagcaggagaggtacttctt 370 || || |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 267 cgcgcatgacccctccgacctgcttcctccagggtggagtgagcaggagaggtacttctt 326 Query: 371 cacgtgcaaggaggccaagtacgtgaagggctgccgcgcgaaccgggccaccggcgccgg 430 ||||||||||||||||||||| || ||||| ||||||| ||||| ||||| |||||||| Sbjct: 327 cacgtgcaaggaggccaagtatgtcaaggggcgccgcgccaaccgcgccacgggcgccgg 386 Query: 431 gtactggaaggccacggggaaggagaagccggt 463 |||||||||||| |||||||||||||||||||| Sbjct: 387 gtactggaaggcgacggggaaggagaagccggt 419 Score = 165 bits (83), Expect = 5e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 508 ccgtggtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 567 |||| ||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 461 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 520 Query: 568 agaagacggactgggtcatgcacgagtaccgcctcgcaggcgccgggctcggcccttgcc 627 ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 521 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 580 Query: 628 gccgcgc 634 ||||||| Sbjct: 581 gccgcgc 587 Score = 125 bits (63), Expect = 4e-25 Identities = 113/129 (87%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 768 ggcgtccggttcatcgacttcttcgcgcgggcggacaccctgcggcggcggcgcgcggcg 827 |||||||||||||||||||||||||| || || ||| | ||||||||| ||||||||| Sbjct: 742 ggcgtccggttcatcgacttcttcgcccgcgccgacgc---gcggcggcgccgcgcggcg 798 Query: 828 tcgccggtgtcgtcgagctgcgtgaccgacggctcggccgaccattgcagggggcaggag 887 |||||||||||||||||||||||||| || | ||||| || |||||||||| ||||||| Sbjct: 799 tcgccggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggag 858 Query: 888 accacgagc 896 || |||||| Sbjct: 859 acgacgagc 867 >ref|NM_001073289.1| Oryza sativa (japonica cultivar-group) Os12g0477400 (Os12g0477400) mRNA, complete cds Length = 783 Score = 327 bits (165), Expect = 6e-86 Identities = 246/273 (90%) Strand = Plus / Plus Query: 191 gctgccgccggggttccggttccgccccaccgacgaggagctggtcgtgcactacctccg 250 |||||||||||||||| ||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 24 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 83 Query: 251 ccgccgcgcgctcgcctcgccgctccccgccgccgtcgatatccccgacgtccgccttct 310 |||||||||||||| ||| || ||||| |||||||||| |||||||| |||||||| || Sbjct: 84 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 143 Query: 311 ggcccacgacccctccgacctcctgcccccagggtggagtgagcaggagaggtacttctt 370 || || |||||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 144 cgcgcatgacccctccgacctgcttcctccagggtggagtgagcaggagaggtacttctt 203 Query: 371 cacgtgcaaggaggccaagtacgtgaagggctgccgcgcgaaccgggccaccggcgccgg 430 ||||||||||||||||||||| || ||||| ||||||| ||||| ||||| |||||||| Sbjct: 204 cacgtgcaaggaggccaagtatgtcaaggggcgccgcgccaaccgcgccacgggcgccgg 263 Query: 431 gtactggaaggccacggggaaggagaagccggt 463 |||||||||||| |||||||||||||||||||| Sbjct: 264 gtactggaaggcgacggggaaggagaagccggt 296 Score = 165 bits (83), Expect = 5e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 508 ccgtggtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 567 |||| ||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 338 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 397 Query: 568 agaagacggactgggtcatgcacgagtaccgcctcgcaggcgccgggctcggcccttgcc 627 ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 398 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 457 Query: 628 gccgcgc 634 ||||||| Sbjct: 458 gccgcgc 464 Score = 125 bits (63), Expect = 4e-25 Identities = 113/129 (87%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 768 ggcgtccggttcatcgacttcttcgcgcgggcggacaccctgcggcggcggcgcgcggcg 827 |||||||||||||||||||||||||| || || ||| | ||||||||| ||||||||| Sbjct: 619 ggcgtccggttcatcgacttcttcgcccgcgccgacgc---gcggcggcgccgcgcggcg 675 Query: 828 tcgccggtgtcgtcgagctgcgtgaccgacggctcggccgaccattgcagggggcaggag 887 |||||||||||||||||||||||||| || | ||||| || |||||||||| ||||||| Sbjct: 676 tcgccggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggag 735 Query: 888 accacgagc 896 || |||||| Sbjct: 736 acgacgagc 744 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 182 bits (92), Expect = 2e-42 Identities = 116/124 (93%) Strand = Plus / Plus Query: 340 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtacgtgaagg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 17432601 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtatgtcaagg 17432660 Query: 400 gctgccgcgcgaaccgggccaccggcgccgggtactggaaggccacggggaaggagaagc 459 | ||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 17432661 ggcgccgcgccaaccgcgccacgggcgccgggtactggaaggcgacggggaaggagaagc 17432720 Query: 460 cggt 463 |||| Sbjct: 17432721 cggt 17432724 Score = 165 bits (83), Expect = 5e-37 Identities = 116/127 (91%) Strand = Plus / Plus Query: 508 ccgtggtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 567 |||| ||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 17432766 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 17432825 Query: 568 agaagacggactgggtcatgcacgagtaccgcctcgcaggcgccgggctcggcccttgcc 627 ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 17432826 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 17432885 Query: 628 gccgcgc 634 ||||||| Sbjct: 17432886 gccgcgc 17432892 Score = 153 bits (77), Expect = 2e-33 Identities = 125/141 (88%) Strand = Plus / Plus Query: 191 gctgccgccggggttccggttccgccccaccgacgaggagctggtcgtgcactacctccg 250 |||||||||||||||| ||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 17432369 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 17432428 Query: 251 ccgccgcgcgctcgcctcgccgctccccgccgccgtcgatatccccgacgtccgccttct 310 |||||||||||||| ||| || ||||| |||||||||| |||||||| |||||||| || Sbjct: 17432429 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 17432488 Query: 311 ggcccacgacccctccgacct 331 || || |||||||||||||| Sbjct: 17432489 cgcgcatgacccctccgacct 17432509 Score = 125 bits (63), Expect = 4e-25 Identities = 113/129 (87%), Gaps = 3/129 (2%) Strand = Plus / Plus Query: 768 ggcgtccggttcatcgacttcttcgcgcgggcggacaccctgcggcggcggcgcgcggcg 827 |||||||||||||||||||||||||| || || ||| | ||||||||| ||||||||| Sbjct: 17433047 ggcgtccggttcatcgacttcttcgcccgcgccgacgc---gcggcggcgccgcgcggcg 17433103 Query: 828 tcgccggtgtcgtcgagctgcgtgaccgacggctcggccgaccattgcagggggcaggag 887 |||||||||||||||||||||||||| || | ||||| || |||||||||| ||||||| Sbjct: 17433104 tcgccggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggag 17433163 Query: 888 accacgagc 896 || |||||| Sbjct: 17433164 acgacgagc 17433172 >emb|AL731763.1|CNS07YQA Oryza sativa chromosome 12, . BAC OSJNBa0090O14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 129619 Score = 182 bits (92), Expect = 2e-42 Identities = 116/124 (93%) Strand = Plus / Minus Query: 340 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtacgtgaagg 399 |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 99805 cagggtggagtgagcaggagaggtacttcttcacgtgcaaggaggccaagtatgtcaagg 99746 Query: 400 gctgccgcgcgaaccgggccaccggcgccgggtactggaaggccacggggaaggagaagc 459 | ||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 99745 ggcgccgcgccaaccgcgccacgggcgccgggtactggaaggcgacggggaaggagaagc 99686 Query: 460 cggt 463 |||| Sbjct: 99685 cggt 99682 Score = 165 bits (83), Expect = 5e-37 Identities = 116/127 (91%) Strand = Plus / Minus Query: 508 ccgtggtcgtgggcatgaagcggtcgctggtgttctaccgggggaagccgccgagcggca 567 |||| ||||| ||||||||||| || || ||||||||||| ||||||||||||| ||||| Sbjct: 99640 ccgtcgtcgtcggcatgaagcgctccctcgtgttctaccgcgggaagccgccgaccggca 99581 Query: 568 agaagacggactgggtcatgcacgagtaccgcctcgcaggcgccgggctcggcccttgcc 627 ||||||||||||||||||||||||||||||||||||| |||||||| |||| ||| |||| Sbjct: 99580 agaagacggactgggtcatgcacgagtaccgcctcgccggcgccggcctcgccccgtgcc 99521 Query: 628 gccgcgc 634 ||||||| Sbjct: 99520 gccgcgc 99514 Score = 153 bits (77), Expect = 2e-33 Identities = 125/141 (88%) Strand = Plus / Minus Query: 191 gctgccgccggggttccggttccgccccaccgacgaggagctggtcgtgcactacctccg 250 |||||||||||||||| ||||| | ||||||||||||||||| || |||||||||||||| Sbjct: 100037 gctgccgccggggttcaggttcaggcccaccgacgaggagcttgtggtgcactacctccg 99978 Query: 251 ccgccgcgcgctcgcctcgccgctccccgccgccgtcgatatccccgacgtccgccttct 310 |||||||||||||| ||| || ||||| |||||||||| |||||||| |||||||| || Sbjct: 99977 ccgccgcgcgctcggctcccctctcccgcccgccgtcgacatccccgatgtccgcctcct 99918 Query: 311 ggcccacgacccctccgacct 331 || || |||||||||||||| Sbjct: 99917 cgcgcatgacccctccgacct 99897 Score = 125 bits (63), Expect = 4e-25 Identities = 113/129 (87%), Gaps = 3/129 (2%) Strand = Plus / Minus Query: 768 ggcgtccggttcatcgacttcttcgcgcgggcggacaccctgcggcggcggcgcgcggcg 827 |||||||||||||||||||||||||| || || ||| | ||||||||| ||||||||| Sbjct: 99359 ggcgtccggttcatcgacttcttcgcccgcgccgacgc---gcggcggcgccgcgcggcg 99303 Query: 828 tcgccggtgtcgtcgagctgcgtgaccgacggctcggccgaccattgcagggggcaggag 887 |||||||||||||||||||||||||| || | ||||| || |||||||||| ||||||| Sbjct: 99302 tcgccggtgtcgtcgagctgcgtgacggatgcgtcggcggagcattgcagggagcaggag 99243 Query: 888 accacgagc 896 || |||||| Sbjct: 99242 acgacgagc 99234 >emb|CT829369.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA056N06, full insert sequence Length = 1536 Score = 89.7 bits (45), Expect = 2e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 191 gctgccgccggggttccggttccgccccaccgacgaggagctggtcgtgcactacctccg 250 ||||||||||||||||||||||| ||| || |||||||||||| || ||||||||||||| Sbjct: 126 gctgccgccggggttccggttccacccgacggacgaggagctgatcctgcactacctccg 185 Query: 251 ccgccgcgc 259 | ||||||| Sbjct: 186 cagccgcgc 194