BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121d10 (1076 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001053240.1| Oryza sativa (japonica cultivar-group) Os02g... 285 2e-73 dbj|AK242355.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 190 8e-45 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic D... 155 4e-34 dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic D... 100 2e-17 >ref|NM_001053240.1| Oryza sativa (japonica cultivar-group) Os02g0326200 (Os02g0326200) mRNA, complete cds Length = 843 Score = 285 bits (144), Expect = 2e-73 Identities = 397/480 (82%), Gaps = 6/480 (1%) Strand = Plus / Plus Query: 261 gaggtggaggttgaggaggatgcctggctggagaagcgtcccaaaccggtcgggttcggc 320 |||||||||||||| ||||||| | ||| |||| || || || ||||| || |||||| Sbjct: 268 gaggtggaggttgatgaggatgaatttctgaagaaccggccgaagccggttggattcggc 327 Query: 321 gcagggaggacctactccactgacattgaggagcggcttctccaggagatgggcctgggc 380 || |||| ||| |||||||| ||||| ||||||| |||||||| ||||||||| ||||| Sbjct: 328 gccgggaagacgtactccaccgacatcgaggagcagcttctccgggagatgggtttgggc 387 Query: 381 ggcgcgctgcgcaggagcg--agccggcc----ctggccaagcaccgcgcggccgctaac 434 ||| || |||||| |||| ||| |||| | ||||||| |||||||||| || ||| Sbjct: 388 ggcaggcggcgcagcagcggaagcgggccgacgccggccaagaaccgcgcggcggccaac 447 Query: 435 tcggccaaagaaaccggcttagatctcagtaatgatggtgttcatgttcgtctttggaac 494 |||||||| | ||| || |||||||| | ||| |||||| ||||||| ||||||| Sbjct: 448 tcggccaagggaacgggtgaagatctcaatgatggcggtgtttgtgttcgtgtttggaat 507 Query: 495 ctcccaaaaaagaagaacatacacaaagacttgaagctagctttcaaagggtttcctggc 554 |||||||||||||| ||||||||||| ||| |||| || |||||||| || ||||| ||| Sbjct: 508 ctcccaaaaaagaaaaacatacacaaggacctgaatcttgctttcaagggatttccaggc 567 Query: 555 ctgataactataaatccagcagtttctgcaaataagaagactcgtgatcctatttgtaag 614 || ||| ||| | ||||| ||||||||||| |||||||||||||||||||| || ||| Sbjct: 568 cttgtaaatattgagccagcggtttctgcaaacaagaagactcgtgatcctatatgcaag 627 Query: 615 ggttttgcatatctcaaacttgagtctctggaggctgcgaccaggtttgttgaactatac 674 |||||||| ||||| ||||| || ||| |||||||||| ||||||||||||||||||||| Sbjct: 628 ggttttgcctatcttaaactggaatctgtggaggctgctaccaggtttgttgaactatac 687 Query: 675 tctagcaaaactgtgtcgttcggcaaggttcagaagccaatcaggtgttgtattgttgat 734 || ||| ||||||| |||||||||||||||||||| |||||||| ||| |||||||| Sbjct: 688 tcccagaaagctgtgtcattcggcaaggttcagaagccgatcaggtgctgtgttgttgat 747 Score = 125 bits (63), Expect = 4e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 104 cgccttctcgcggccccagccttcccggatccgtgcgtcccacctgctcttcgccttccc 163 |||| |||||| ||||| |||||| ||| | || ||||||||||| |||||||||||||| Sbjct: 78 cgccgtctcgctgcccccgccttctcggctacgcgcgtcccacctcctcttcgccttccc 137 Query: 164 tcgcctgaggaaatacggtcgccgggaccgcgagcccgtaaccaccagcttcgacgagga 223 ||||||| |||||||||| |||||||||||||||||||| | |||||||| | |||| Sbjct: 138 tcgcctgcggaaatacggccgccgggaccgcgagcccgtggcgaccagcttgggcgagtt 197 Query: 224 ggcagaggaggacgaggagtacgacgaggaggaggaagaggtggagg 270 | |||||||| ||||| |||| ||||||||||| |||| ||||| Sbjct: 198 agaggaggaggatgaggatgacgaggaggaggaggaggaggaggagg 244 >dbj|AK242355.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080018L02, full insert sequence Length = 1391 Score = 190 bits (96), Expect = 8e-45 Identities = 234/280 (83%) Strand = Plus / Plus Query: 570 ccagcagtttctgcaaataagaagactcgtgatcctatttgtaagggttttgcatatctc 629 ||||| ||||||||||| |||||||||||||||||||| || ||||||||||| ||||| Sbjct: 919 ccagcggtttctgcaaacaagaagactcgtgatcctatatgcaagggttttgcctatctt 978 Query: 630 aaacttgagtctctggaggctgcgaccaggtttgttgaactatactctagcaaaactgtg 689 ||||| || ||| |||||||||| ||||||||||||||||||||||| ||| ||||| Sbjct: 979 aaactggaatctgtggaggctgctaccaggtttgttgaactatactcccagaaagctgtg 1038 Query: 690 tcgttcggcaaggttcagaagccaatcaggtgttgtattgttgatggggacagttctatt 749 || |||||||||||||||||||| |||||||| ||| |||||||| | || ||| || Sbjct: 1039 tcattcggcaaggttcagaagccgatcaggtgctgtgttgttgattcacaaagctctgtt 1098 Query: 750 gatccttcaaatcaagcatctagtaatcaggcaatctttcaaccgggattgaacccccaa 809 || | ||||||| |||| ||| |||||||||| |||||| || |||| || || Sbjct: 1099 gactcccaaaatcaaccatccagtggtcaggcaatccgtcaacccgggttgatggccaaa 1158 Query: 810 aatttggtggccgcaagttgaatgacacattgatctgtca 849 ||||||||||| ||||| ||||||||| |||||||||||| Sbjct: 1159 aatttggtggcagcaagctgaatgacaaattgatctgtca 1198 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 155 bits (78), Expect = 4e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 479 tgttcgtctttggaacctcccaaaaaagaagaacatacacaaagacttgaagctagcttt 538 ||||||| ||||||| |||||||||||||| ||||||||||| ||| |||| || ||||| Sbjct: 13128688 tgttcgtgtttggaatctcccaaaaaagaaaaacatacacaaggacctgaatcttgcttt 13128747 Query: 539 caaagggtttcctggcctgataactataaatccagcagtttctgcaaataagaagactcg 598 ||| || ||||| ||||| ||| ||| | ||||| ||||||||||| ||||||||||| Sbjct: 13128748 caagggatttccaggccttgtaaatattgagccagcggtttctgcaaacaagaagactcg 13128807 Query: 599 tgatcctatttgtaagggttttgcatatctcaaacttgagtctctggaggctgcgaccag 658 ||||||||| || ||||||||||| ||||| ||||| || ||| |||||||||| ||||| Sbjct: 13128808 tgatcctatatgcaagggttttgcctatcttaaactggaatctgtggaggctgctaccag 13128867 Query: 659 gt 660 || Sbjct: 13128868 gt 13128869 Score = 125 bits (63), Expect = 4e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 104 cgccttctcgcggccccagccttcccggatccgtgcgtcccacctgctcttcgccttccc 163 |||| |||||| ||||| |||||| ||| | || ||||||||||| |||||||||||||| Sbjct: 13126253 cgccgtctcgctgcccccgccttctcggctacgcgcgtcccacctcctcttcgccttccc 13126312 Query: 164 tcgcctgaggaaatacggtcgccgggaccgcgagcccgtaaccaccagcttcgacgagga 223 ||||||| |||||||||| |||||||||||||||||||| | |||||||| | |||| Sbjct: 13126313 tcgcctgcggaaatacggccgccgggaccgcgagcccgtggcgaccagcttgggcgagtt 13126372 Query: 224 ggcagaggaggacgaggagtacgacgaggaggaggaagaggtggagg 270 | |||||||| ||||| |||| ||||||||||| |||| ||||| Sbjct: 13126373 agaggaggaggatgaggatgacgaggaggaggaggaggaggaggagg 13126419 Score = 99.6 bits (50), Expect = 2e-17 Identities = 158/194 (81%) Strand = Plus / Plus Query: 656 caggtttgttgaactatactctagcaaaactgtgtcgttcggcaaggttcagaagccaat 715 ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || Sbjct: 13131292 caggtttgttgaactatactcccagaaagctgtgtcattcggcaaggttcagaagccgat 13131351 Query: 716 caggtgttgtattgttgatggggacagttctattgatccttcaaatcaagcatctagtaa 775 |||||| ||| |||||||| | || ||| |||| | ||||||| |||| ||| Sbjct: 13131352 caggtgctgtgttgttgattcacaaagctctgttgactcccaaaatcaaccatccagtgg 13131411 Query: 776 tcaggcaatctttcaaccgggattgaacccccaaaatttggtggccgcaagttgaatgac 835 |||||||||| |||||| || |||| || ||||||||||||| ||||| |||||||| Sbjct: 13131412 tcaggcaatccgtcaacccgggttgatggccaaaaatttggtggcagcaagctgaatgac 13131471 Query: 836 acattgatctgtca 849 | |||||||||||| Sbjct: 13131472 aaattgatctgtca 13131485 Score = 79.8 bits (40), Expect = 2e-11 Identities = 152/188 (80%), Gaps = 6/188 (3%) Strand = Plus / Plus Query: 261 gaggtggaggttgaggaggatgcctggctggagaagcgtcccaaaccggtcgggttcggc 320 |||||||||||||| ||||||| | ||| |||| || || || ||||| || |||||| Sbjct: 13126443 gaggtggaggttgatgaggatgaatttctgaagaaccggccgaagccggttggattcggc 13126502 Query: 321 gcagggaggacctactccactgacattgaggagcggcttctccaggagatgggcctgggc 380 || |||| ||| |||||||| ||||| ||||||| |||||||| ||||||||| ||||| Sbjct: 13126503 gccgggaagacgtactccaccgacatcgaggagcagcttctccgggagatgggtttgggc 13126562 Query: 381 ggcgcgctgcgcaggagcg--agccggcc----ctggccaagcaccgcgcggccgctaac 434 ||| || |||||| |||| ||| |||| | ||||||| |||||||||| || ||| Sbjct: 13126563 ggcaggcggcgcagcagcggaagcgggccgacgccggccaagaaccgcgcggcggccaac 13126622 Query: 435 tcggccaa 442 |||||||| Sbjct: 13126623 tcggccaa 13126630 >dbj|AP004789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476C12 Length = 157570 Score = 155 bits (78), Expect = 4e-34 Identities = 156/182 (85%) Strand = Plus / Plus Query: 479 tgttcgtctttggaacctcccaaaaaagaagaacatacacaaagacttgaagctagcttt 538 ||||||| ||||||| |||||||||||||| ||||||||||| ||| |||| || ||||| Sbjct: 105265 tgttcgtgtttggaatctcccaaaaaagaaaaacatacacaaggacctgaatcttgcttt 105324 Query: 539 caaagggtttcctggcctgataactataaatccagcagtttctgcaaataagaagactcg 598 ||| || ||||| ||||| ||| ||| | ||||| ||||||||||| ||||||||||| Sbjct: 105325 caagggatttccaggccttgtaaatattgagccagcggtttctgcaaacaagaagactcg 105384 Query: 599 tgatcctatttgtaagggttttgcatatctcaaacttgagtctctggaggctgcgaccag 658 ||||||||| || ||||||||||| ||||| ||||| || ||| |||||||||| ||||| Sbjct: 105385 tgatcctatatgcaagggttttgcctatcttaaactggaatctgtggaggctgctaccag 105444 Query: 659 gt 660 || Sbjct: 105445 gt 105446 Score = 125 bits (63), Expect = 4e-25 Identities = 141/167 (84%) Strand = Plus / Plus Query: 104 cgccttctcgcggccccagccttcccggatccgtgcgtcccacctgctcttcgccttccc 163 |||| |||||| ||||| |||||| ||| | || ||||||||||| |||||||||||||| Sbjct: 102830 cgccgtctcgctgcccccgccttctcggctacgcgcgtcccacctcctcttcgccttccc 102889 Query: 164 tcgcctgaggaaatacggtcgccgggaccgcgagcccgtaaccaccagcttcgacgagga 223 ||||||| |||||||||| |||||||||||||||||||| | |||||||| | |||| Sbjct: 102890 tcgcctgcggaaatacggccgccgggaccgcgagcccgtggcgaccagcttgggcgagtt 102949 Query: 224 ggcagaggaggacgaggagtacgacgaggaggaggaagaggtggagg 270 | |||||||| ||||| |||| ||||||||||| |||| ||||| Sbjct: 102950 agaggaggaggatgaggatgacgaggaggaggaggaggaggaggagg 102996 Score = 99.6 bits (50), Expect = 2e-17 Identities = 158/194 (81%) Strand = Plus / Plus Query: 656 caggtttgttgaactatactctagcaaaactgtgtcgttcggcaaggttcagaagccaat 715 ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || Sbjct: 107869 caggtttgttgaactatactcccagaaagctgtgtcattcggcaaggttcagaagccgat 107928 Query: 716 caggtgttgtattgttgatggggacagttctattgatccttcaaatcaagcatctagtaa 775 |||||| ||| |||||||| | || ||| |||| | ||||||| |||| ||| Sbjct: 107929 caggtgctgtgttgttgattcacaaagctctgttgactcccaaaatcaaccatccagtgg 107988 Query: 776 tcaggcaatctttcaaccgggattgaacccccaaaatttggtggccgcaagttgaatgac 835 |||||||||| |||||| || |||| || ||||||||||||| ||||| |||||||| Sbjct: 107989 tcaggcaatccgtcaacccgggttgatggccaaaaatttggtggcagcaagctgaatgac 108048 Query: 836 acattgatctgtca 849 | |||||||||||| Sbjct: 108049 aaattgatctgtca 108062 Score = 79.8 bits (40), Expect = 2e-11 Identities = 152/188 (80%), Gaps = 6/188 (3%) Strand = Plus / Plus Query: 261 gaggtggaggttgaggaggatgcctggctggagaagcgtcccaaaccggtcgggttcggc 320 |||||||||||||| ||||||| | ||| |||| || || || ||||| || |||||| Sbjct: 103020 gaggtggaggttgatgaggatgaatttctgaagaaccggccgaagccggttggattcggc 103079 Query: 321 gcagggaggacctactccactgacattgaggagcggcttctccaggagatgggcctgggc 380 || |||| ||| |||||||| ||||| ||||||| |||||||| ||||||||| ||||| Sbjct: 103080 gccgggaagacgtactccaccgacatcgaggagcagcttctccgggagatgggtttgggc 103139 Query: 381 ggcgcgctgcgcaggagcg--agccggcc----ctggccaagcaccgcgcggccgctaac 434 ||| || |||||| |||| ||| |||| | ||||||| |||||||||| || ||| Sbjct: 103140 ggcaggcggcgcagcagcggaagcgggccgacgccggccaagaaccgcgcggcggccaac 103199 Query: 435 tcggccaa 442 |||||||| Sbjct: 103200 tcggccaa 103207 >dbj|AP005778.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0042G06 Length = 123571 Score = 99.6 bits (50), Expect = 2e-17 Identities = 158/194 (81%) Strand = Plus / Plus Query: 656 caggtttgttgaactatactctagcaaaactgtgtcgttcggcaaggttcagaagccaat 715 ||||||||||||||||||||| ||| ||||||| |||||||||||||||||||| || Sbjct: 1322 caggtttgttgaactatactcccagaaagctgtgtcattcggcaaggttcagaagccgat 1381 Query: 716 caggtgttgtattgttgatggggacagttctattgatccttcaaatcaagcatctagtaa 775 |||||| ||| |||||||| | || ||| |||| | ||||||| |||| ||| Sbjct: 1382 caggtgctgtgttgttgattcacaaagctctgttgactcccaaaatcaaccatccagtgg 1441 Query: 776 tcaggcaatctttcaaccgggattgaacccccaaaatttggtggccgcaagttgaatgac 835 |||||||||| |||||| || |||| || ||||||||||||| ||||| |||||||| Sbjct: 1442 tcaggcaatccgtcaacccgggttgatggccaaaaatttggtggcagcaagctgaatgac 1501 Query: 836 acattgatctgtca 849 | |||||||||||| Sbjct: 1502 aaattgatctgtca 1515