BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem121a01 (1120 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001060843.1| Oryza sativa (japonica cultivar-group) Os04g... 448 e-122 dbj|AK101506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 448 e-122 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 133 2e-27 emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 125 4e-25 emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4,... 119 3e-23 >ref|NM_001060843.1| Oryza sativa (japonica cultivar-group) Os04g0684200 (Os04g0684200) mRNA, complete cds Length = 2324 Score = 448 bits (226), Expect = e-122 Identities = 559/670 (83%) Strand = Plus / Plus Query: 225 ggggactcgtacgacctgccgcccttccaggagttctccttcgagcagctgcgcctcgct 284 ||||| ||||| || |||||| |||| ||||| |||||||||||||||||| | || || Sbjct: 429 ggggagtcgtatgagctgccggcctttcaggaattctccttcgagcagctgaggctggcc 488 Query: 285 acctctggcttcgccgcccagaatatcgtctccgaacacggcgacaaggcccccaacgtc 344 ||||| ||||| || | |||| ||||| || || || || || ||||| ||||| || Sbjct: 489 acctcaggctttgcggtggagaacatcgtgtctgagcatggtgagaaggcgcccaatgtg 548 Query: 345 gtctataagggcaagctccacgcccagcgccggattgccgtcaagcgcttcaaccgcgcc 404 || || ||||| |||||| |||| ||||| || || || || ||| | |||||||| | Sbjct: 549 gtgtacaaggggaagctcgacgcgcagcgtcgcatcgctgtgaagaggttcaaccgttct 608 Query: 405 gcctggcccgacccacgccaattcttggaagaagccaagtctgttggccagcttcggagc 464 || ||||| ||||| || || |||||||||||||| || || ||||| || ||||||||| Sbjct: 609 gcatggcctgacccgcggcagttcttggaagaagctaaatcagttggacaacttcggagc 668 Query: 465 aaaagattagcaaatttacttggttgttgcagcgaagctgatgaaagattgcttgttgct 524 ||||| ||||||||||| ||||| |||||| |||||| ||| || |||||||||||||| Sbjct: 669 aaaaggttagcaaatttgcttggctgttgctgcgaaggtgacgagagattgcttgttgca 728 Query: 525 gagtacatgcccaatgacacgctggcaaaacatcttttccattgggagtcacaggcaatg 584 || ||||||||||||||||| || || || |||||||||||||||||| | || |||||| Sbjct: 729 gaatacatgcccaatgacacactagcgaagcatcttttccattgggaggcgcaagcaatg 788 Query: 585 acatggcccatgagattaagggttgttctttatcttgccgaggctttagaatactgtgcg 644 | |||||||||||||||||| |||||||| ||||| || |||||||||||||| || | Sbjct: 789 aaatggcccatgagattaagagttgttctctatctggctgaggctttagaatattgcacc 848 Query: 645 agtaaggggcgggctctctatcatgatcttaatgcctatagagttttgtttgatgatgac 704 || |||||||| ||||| || ||||||||||||||||| |||||| | |||||||||||| Sbjct: 849 agcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgatgatgac 908 Query: 705 tgcaaccctaggctttcatgttttggtctgatgaagaacaatcgggatggcaaaagttat 764 || ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| || Sbjct: 909 tgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagctac 968 Query: 765 agcaccaatttggcattcactcctcctgaatatatgaggactggaagaataaccccggaa 824 || |||||| |||| || |||||||| || || ||||| |||||| | || || || || Sbjct: 969 agtaccaatctggcgtttactcctccagagtacatgagaactggacgtatcacacctgag 1028 Query: 825 agcgtcatatacagctttggcacattgttgttggatgttcttagtgggaagcatattcct 884 || ||||| ||||||||||| || ||| | |||||||||||||||||||||||||||||| Sbjct: 1029 agtgtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcct 1088 Query: 885 cctagccatg 894 |||||||||| Sbjct: 1089 cctagccatg 1098 >dbj|AK101506.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044N06, full insert sequence Length = 2325 Score = 448 bits (226), Expect = e-122 Identities = 559/670 (83%) Strand = Plus / Plus Query: 225 ggggactcgtacgacctgccgcccttccaggagttctccttcgagcagctgcgcctcgct 284 ||||| ||||| || |||||| |||| ||||| |||||||||||||||||| | || || Sbjct: 430 ggggagtcgtatgagctgccggcctttcaggaattctccttcgagcagctgaggctggcc 489 Query: 285 acctctggcttcgccgcccagaatatcgtctccgaacacggcgacaaggcccccaacgtc 344 ||||| ||||| || | |||| ||||| || || || || || ||||| ||||| || Sbjct: 490 acctcaggctttgcggtggagaacatcgtgtctgagcatggtgagaaggcgcccaatgtg 549 Query: 345 gtctataagggcaagctccacgcccagcgccggattgccgtcaagcgcttcaaccgcgcc 404 || || ||||| |||||| |||| ||||| || || || || ||| | |||||||| | Sbjct: 550 gtgtacaaggggaagctcgacgcgcagcgtcgcatcgctgtgaagaggttcaaccgttct 609 Query: 405 gcctggcccgacccacgccaattcttggaagaagccaagtctgttggccagcttcggagc 464 || ||||| ||||| || || |||||||||||||| || || ||||| || ||||||||| Sbjct: 610 gcatggcctgacccgcggcagttcttggaagaagctaaatcagttggacaacttcggagc 669 Query: 465 aaaagattagcaaatttacttggttgttgcagcgaagctgatgaaagattgcttgttgct 524 ||||| ||||||||||| ||||| |||||| |||||| ||| || |||||||||||||| Sbjct: 670 aaaaggttagcaaatttgcttggctgttgctgcgaaggtgacgagagattgcttgttgca 729 Query: 525 gagtacatgcccaatgacacgctggcaaaacatcttttccattgggagtcacaggcaatg 584 || ||||||||||||||||| || || || |||||||||||||||||| | || |||||| Sbjct: 730 gaatacatgcccaatgacacactagcgaagcatcttttccattgggaggcgcaagcaatg 789 Query: 585 acatggcccatgagattaagggttgttctttatcttgccgaggctttagaatactgtgcg 644 | |||||||||||||||||| |||||||| ||||| || |||||||||||||| || | Sbjct: 790 aaatggcccatgagattaagagttgttctctatctggctgaggctttagaatattgcacc 849 Query: 645 agtaaggggcgggctctctatcatgatcttaatgcctatagagttttgtttgatgatgac 704 || |||||||| ||||| || ||||||||||||||||| |||||| | |||||||||||| Sbjct: 850 agcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgatgatgac 909 Query: 705 tgcaaccctaggctttcatgttttggtctgatgaagaacaatcgggatggcaaaagttat 764 || ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| || Sbjct: 910 tgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagctac 969 Query: 765 agcaccaatttggcattcactcctcctgaatatatgaggactggaagaataaccccggaa 824 || |||||| |||| || |||||||| || || ||||| |||||| | || || || || Sbjct: 970 agtaccaatctggcgtttactcctccagagtacatgagaactggacgtatcacacctgag 1029 Query: 825 agcgtcatatacagctttggcacattgttgttggatgttcttagtgggaagcatattcct 884 || ||||| ||||||||||| || ||| | |||||||||||||||||||||||||||||| Sbjct: 1030 agtgtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcct 1089 Query: 885 cctagccatg 894 |||||||||| Sbjct: 1090 cctagccatg 1099 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 133 bits (67), Expect = 2e-27 Identities = 124/143 (86%) Strand = Plus / Plus Query: 431 ggaagaagccaagtctgttggccagcttcggagcaaaagattagcaaatttacttggttg 490 ||||||||| || || ||||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 34980069 ggaagaagctaaatcagttggacaacttcggagcaaaaggttagcaaatttgcttggctg 34980128 Query: 491 ttgcagcgaagctgatgaaagattgcttgttgctgagtacatgcccaatgacacgctggc 550 |||| |||||| ||| || |||||||||||||| || ||||||||||||||||| || || Sbjct: 34980129 ttgctgcgaaggtgacgagagattgcttgttgcagaatacatgcccaatgacacactagc 34980188 Query: 551 aaaacatcttttccattgggagt 573 || |||||||||||||| |||| Sbjct: 34980189 gaagcatcttttccattgtgagt 34980211 Score = 119 bits (60), Expect = 3e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 579 gcaatgacatggcccatgagattaagggttgttctttatcttgccgaggctttagaatac 638 ||||||| |||||||||||||||||| |||||||| ||||| || |||||||||||||| Sbjct: 34980666 gcaatgaaatggcccatgagattaagagttgttctctatctggctgaggctttagaatat 34980725 Query: 639 tgtgcgagtaaggggcgggctctctatcatgatcttaatgcctatagagttttgtttgat 698 || | || |||||||| ||||| || ||||||||||||||||| |||||| | |||||| Sbjct: 34980726 tgcaccagcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgat 34980785 Query: 699 gatg 702 |||| Sbjct: 34980786 gatg 34980789 Score = 97.6 bits (49), Expect = 9e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 828 gtcatatacagctttggcacattgttgttggatgttcttagtgggaagcatattcctcct 887 ||||| ||||||||||| || ||| | ||||||||||||||||||||||||||||||||| Sbjct: 34981471 gtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcctcct 34981530 Query: 888 agccatgta 896 ||||||||| Sbjct: 34981531 agccatgta 34981539 Score = 85.7 bits (43), Expect = 4e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 702 gactgcaaccctaggctttcatgttttggtctgatgaagaacaatcgggatggcaaaagt 761 ||||| ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| Sbjct: 34980868 gactgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagc 34980927 Query: 762 tatagcaccaatttggcattcactcctcctgaatatatgaggactgg 808 || || |||||| |||| || |||||||| || || ||||| ||||| Sbjct: 34980928 tacagtaccaatctggcgtttactcctccagagtacatgagaactgg 34980974 >emb|AL732343.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0913C04, complete sequence Length = 94152 Score = 125 bits (63), Expect = 4e-25 Identities = 123/143 (86%) Strand = Plus / Plus Query: 431 ggaagaagccaagtctgttggccagcttcggagcaaaagattagcaaatttacttggttg 490 ||||||||| || || ||||| || || ||||||||||| ||||||||||| ||||| || Sbjct: 10238 ggaagaagctaaatcagttggacaactccggagcaaaaggttagcaaatttgcttggctg 10297 Query: 491 ttgcagcgaagctgatgaaagattgcttgttgctgagtacatgcccaatgacacgctggc 550 |||| |||||| ||| || |||||||||||||| || ||||||||||||||||| || || Sbjct: 10298 ttgctgcgaaggtgacgagagattgcttgttgcagaatacatgcccaatgacacactagc 10357 Query: 551 aaaacatcttttccattgggagt 573 || |||||||||||||| |||| Sbjct: 10358 gaagcatcttttccattgtgagt 10380 Score = 119 bits (60), Expect = 3e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 579 gcaatgacatggcccatgagattaagggttgttctttatcttgccgaggctttagaatac 638 ||||||| |||||||||||||||||| |||||||| ||||| || |||||||||||||| Sbjct: 10835 gcaatgaaatggcccatgagattaagagttgttctctatctggctgaggctttagaatat 10894 Query: 639 tgtgcgagtaaggggcgggctctctatcatgatcttaatgcctatagagttttgtttgat 698 || | || |||||||| ||||| || ||||||||||||||||| |||||| | |||||| Sbjct: 10895 tgcaccagcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgat 10954 Query: 699 gatg 702 |||| Sbjct: 10955 gatg 10958 Score = 97.6 bits (49), Expect = 9e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 828 gtcatatacagctttggcacattgttgttggatgttcttagtgggaagcatattcctcct 887 ||||| ||||||||||| || ||| | ||||||||||||||||||||||||||||||||| Sbjct: 11640 gtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcctcct 11699 Query: 888 agccatgta 896 ||||||||| Sbjct: 11700 agccatgta 11708 Score = 85.7 bits (43), Expect = 4e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 702 gactgcaaccctaggctttcatgttttggtctgatgaagaacaatcgggatggcaaaagt 761 ||||| ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| Sbjct: 11037 gactgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagc 11096 Query: 762 tatagcaccaatttggcattcactcctcctgaatatatgaggactgg 808 || || |||||| |||| || |||||||| || || ||||| ||||| Sbjct: 11097 tacagtaccaatctggcgtttactcctccagagtacatgagaactgg 11143 >emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09, complete sequence Length = 145391 Score = 119 bits (60), Expect = 3e-23 Identities = 108/124 (87%) Strand = Plus / Plus Query: 579 gcaatgacatggcccatgagattaagggttgttctttatcttgccgaggctttagaatac 638 ||||||| |||||||||||||||||| |||||||| ||||| || |||||||||||||| Sbjct: 39716 gcaatgaaatggcccatgagattaagagttgttctctatctggctgaggctttagaatat 39775 Query: 639 tgtgcgagtaaggggcgggctctctatcatgatcttaatgcctatagagttttgtttgat 698 || | || |||||||| ||||| || ||||||||||||||||| |||||| | |||||| Sbjct: 39776 tgcaccagcaaggggcgtgctctgtaccatgatcttaatgcctacagagttctctttgat 39835 Query: 699 gatg 702 |||| Sbjct: 39836 gatg 39839 Score = 101 bits (51), Expect = 6e-18 Identities = 122/143 (85%), Gaps = 2/143 (1%) Strand = Plus / Plus Query: 431 ggaagaagccaagtctgttggccagcttcggagcaaaagattagcaaatttacttggttg 490 ||||||||| || || ||||| || |||||||||||| | ||||||| ||| ||||| || Sbjct: 39121 ggaagaagctaaatcagttggacaacttcggagcaaagg-ttagcaa-tttgcttggctg 39178 Query: 491 ttgcagcgaagctgatgaaagattgcttgttgctgagtacatgcccaatgacacgctggc 550 |||| |||||| ||| || |||||||||||||| || ||||||||||||||||| || || Sbjct: 39179 ttgctgcgaaggtgacgagagattgcttgttgcagaatacatgcccaatgacacactagc 39238 Query: 551 aaaacatcttttccattgggagt 573 || |||||||||||||| |||| Sbjct: 39239 gaagcatcttttccattgtgagt 39261 Score = 97.6 bits (49), Expect = 9e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 828 gtcatatacagctttggcacattgttgttggatgttcttagtgggaagcatattcctcct 887 ||||| ||||||||||| || ||| | ||||||||||||||||||||||||||||||||| Sbjct: 40521 gtcatttacagctttggtaccttgcttttggatgttcttagtgggaagcatattcctcct 40580 Query: 888 agccatgta 896 ||||||||| Sbjct: 40581 agccatgta 40589 Score = 85.7 bits (43), Expect = 4e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 702 gactgcaaccctaggctttcatgttttggtctgatgaagaacaatcgggatggcaaaagt 761 ||||| ||||||||||||||||||||||| || |||||||||| ||| ||||| ||||| Sbjct: 39918 gactgtaaccctaggctttcatgttttggcctcatgaagaacagtcgagatggtaaaagc 39977 Query: 762 tatagcaccaatttggcattcactcctcctgaatatatgaggactgg 808 || || |||||| |||| || |||||||| || || ||||| ||||| Sbjct: 39978 tacagtaccaatctggcgtttactcctccagagtacatgagaactgg 40024