BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem120m19
         (1200 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...   180   9e-42
dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D...   180   9e-42
ref|NM_001054307.1| Oryza sativa (japonica cultivar-group) Os02g...   168   3e-38
dbj|AK102917.1| Oryza sativa (japonica cultivar-group) cDNA clon...   168   3e-38
ref|NM_001061433.1| Oryza sativa (japonica cultivar-group) Os05g...   121   7e-24

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  180 bits (91), Expect = 9e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                            
Query: 683      agatccttgatatgctggatgctgtgcttgacgttggtggtgtccatgattccagctggc 742
                ||||||| ||||  ||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 28145596 agatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggc 28145537

                                                                            
Query: 743      atcgctatgatcatcaccagaagagcttcaacgaggtctttggacatggctttaacatga 802
                ||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||  |
Sbjct: 28145536 atcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaa 28145477

                                                   
Query: 803      aacttagcagtgctgggtttgtctacaaggtactt 837
                ||||||||||||| ||| |||| ||||||||||||
Sbjct: 28145476 aacttagcagtgccgggcttgtttacaaggtactt 28145442


>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score =  180 bits (91), Expect = 9e-42
 Identities = 139/155 (89%)
 Strand = Plus / Minus

                                                                          
Query: 683    agatccttgatatgctggatgctgtgcttgacgttggtggtgtccatgattccagctggc 742
              ||||||| ||||  ||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 135243 agatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggc 135184

                                                                          
Query: 743    atcgctatgatcatcaccagaagagcttcaacgaggtctttggacatggctttaacatga 802
              ||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||  |
Sbjct: 135183 atcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaa 135124

                                                 
Query: 803    aacttagcagtgctgggtttgtctacaaggtactt 837
              ||||||||||||| ||| |||| ||||||||||||
Sbjct: 135123 aacttagcagtgccgggcttgtttacaaggtactt 135089


>ref|NM_001054307.1| Oryza sativa (japonica cultivar-group) Os02g0686600 (Os02g0686600)
           mRNA, complete cds
          Length = 1367

 Score =  168 bits (85), Expect = 3e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                       
Query: 683 agatccttgatatgctggatgctgtgcttgacgttggtggtgtccatgattccagctggc 742
           ||||||| ||||  ||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 261 agatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggc 320

                                                                       
Query: 743 atcgctatgatcatcaccagaagagcttcaacgaggtctttggacatggctttaacatga 802
           ||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||  |
Sbjct: 321 atcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaa 380

                                        
Query: 803 aacttagcagtgctgggtttgtctacaag 831
           ||||||||||||| ||| |||| ||||||
Sbjct: 381 aacttagcagtgccgggcttgtttacaag 409


>dbj|AK102917.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A13, full
           insert sequence
          Length = 1368

 Score =  168 bits (85), Expect = 3e-38
 Identities = 133/149 (89%)
 Strand = Plus / Plus

                                                                       
Query: 683 agatccttgatatgctggatgctgtgcttgacgttggtggtgtccatgattccagctggc 742
           ||||||| ||||  ||||||||||||||||| |||||||||||| ||||| ||||| |||
Sbjct: 262 agatcctcgatactctggatgctgtgcttgatgttggtggtgtctatgatcccagccggc 321

                                                                       
Query: 743 atcgctatgatcatcaccagaagagcttcaacgaggtctttggacatggctttaacatga 802
           ||||||| ||||||||||||||| |||| || |||||||||||||||||||||||||  |
Sbjct: 322 atcgctacgatcatcaccagaagggctttaatgaggtctttggacatggctttaacacaa 381

                                        
Query: 803 aacttagcagtgctgggtttgtctacaag 831
           ||||||||||||| ||| |||| ||||||
Sbjct: 382 aacttagcagtgccgggcttgtttacaag 410


>ref|NM_001061433.1| Oryza sativa (japonica cultivar-group) Os05g0207200 (Os05g0207200)
           mRNA, complete cds
          Length = 1356

 Score =  121 bits (61), Expect = 7e-24
 Identities = 178/215 (82%), Gaps = 4/215 (1%)
 Strand = Plus / Plus

                                                                       
Query: 433 cgctcctccacgccctcctcgcctgccgcacgcctctccgcgacctcccctccatctgcc 492
           ||||||||||||||||||||||||||||| |||| ||||  || |||| ||||   ||||
Sbjct: 380 cgctcctccacgccctcctcgcctgccgcgcgcccctcccggagctcctctccgagtgcc 439

                                                                       
Query: 493 gggaggccgccatcc-cccggacgcgtgctcctacaacatccttatgcgtgcagagg--- 548
           | |   ||| ||||| ||| ||||||||| ||||||||||||| ||||| || | ||   
Sbjct: 440 gcggctccggcatccaccccgacgcgtgcacctacaacatcctaatgcgcgccgcggtgg 499

                                                                       
Query: 549 ccgtgtctggctccgtttaccacgcgcgtcacctgttcgacgaaatgctacagcagggga 608
           |||  |||||||||||  || ||||  | | |||||||||||||||||| |||| |||||
Sbjct: 500 ccgactctggctccgtcgacaacgcctgcctcctgttcgacgaaatgctgcagcggggga 559

                                              
Query: 609 tagcccccactgtcgtcacgtttggcaccctcgtc 643
           | ||||| |||||||||||||||||||||||||||
Sbjct: 560 tcgccccgactgtcgtcacgtttggcaccctcgtc 594



 Score = 85.7 bits (43), Expect = 4e-13
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                       
Query: 332 ctcctctgccgcgtcatcgccgcctacggtcgcgcccgcctcccagccgccgcccgccgc 391
           ||||| |||||||||||| |||| ||||| |||||||||||||| |||||||||||||||
Sbjct: 268 ctcctgtgccgcgtcatctccgcgtacggccgcgcccgcctccccgccgccgcccgccgc 327

              
Query: 392 gcc 394
           |||
Sbjct: 328 gcc 330