BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem120i03 (1329 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|DQ245292.1| Zea mays clone 14335 mRNA sequence 428 e-116 ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g... 392 e-105 dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 248 5e-62 dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic D... 248 5e-62 >gb|DQ245292.1| Zea mays clone 14335 mRNA sequence Length = 1193 Score = 428 bits (216), Expect = e-116 Identities = 578/697 (82%), Gaps = 15/697 (2%) Strand = Plus / Plus Query: 278 cccgcggttccacctccgatggttcacccccgtcgccgaggtcgagctctgcgggcacgc 337 ||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 301 cccgctgttccagctccgatggttcacccccgtcgctgaggtggagctctgcggccacgc 360 Query: 338 gacattggcctccgcgcacttcctcttcacatccgttcttgcgaggcatgaca---tggt 394 || |||| ||||| |||||||||||||||||||| || ||| ||| || | | || Sbjct: 361 cacgctggcttccgcccacttcctcttcacatccgtcctcgcggagcacgagaagctcgt 420 Query: 395 tgagttcgcgaccaagtccgggatcctgactgccaagaaggttccagcaccggagagcac 454 |||||| |||||||||||||||| || || ||||| ||||| || || ||| ||||||| Sbjct: 421 cgagttctcgaccaagtccgggattcttacggccaaaaaggtccctgcgccgcagagcac 480 Query: 455 gggcgtctcaggtgaggaggagcaggggaagctgttcatcgagttggatttccccatggt 514 |||||| || || ||| |||||||||||||| ||| |||||||||||| | | Sbjct: 481 gggcgtgtcgggcgag---------gggaagctgttcattgagctggatttccccacgat 531 Query: 515 tgatctcgtggagtgcaactcc--gcgaggtgccgtcgatccccgagactctaaacggcg 572 ||| || || || ||| | ||| |||| ||||| | |||||||| || || ||||| | Sbjct: 532 tgaccttgttgattgcca-tccttccgagctgccggcaatccccgacaccctcaacggag 590 Query: 573 cacccgtcgtcagcgttcacaaatcggcaaccgccggggacctcattgtggaactttctt 632 | || | |||||||||||||| || | || ||||| |||||||||||||| ||||| | Sbjct: 591 cctccattgtcagcgttcacaagtcaacgacggccggtgacctcattgtggagctttcat 650 Query: 633 caggaaaagaggttgctgatatcattcctaacattgacgaaatcaaaaaatgtgccggca 692 ||||||| ||||||||||||||||||||||||||| | ||||| |||| ||| |||||| Sbjct: 651 caggaaaggaggttgctgatatcattcctaacattcatgaaattgaaaagtgttccggca 710 Query: 693 gaggagttattgttacagggccggcacctgctggatctggatatgacttcttcacacgtt 752 ||||| |||||||||||||||| || |||||||||||||| || ||||||||||| |||| Sbjct: 711 gaggaattattgttacagggccagcgcctgctggatctggctacgacttcttcacgcgtt 770 Query: 753 tcttctgcccaaaatttggggtagatgaggatcctgtttgtggtagcgcacattgcgttt 812 | ||||||||||||||||| ||||||||||||| |||||||| || |||||||| |||| Sbjct: 771 ttttctgcccaaaatttggaatagatgaggatcccgtttgtggcagtgcacattgtgttt 830 Query: 813 tggcaccctattggggtggaaagctggggaaacaaaaactgacagcgtttcaagcatctc 872 | ||||| || |||||||| |||||||||||||| ||||||| ||||||||||||||| | Sbjct: 831 tagcaccttactggggtgggaagctggggaaacacaaactgatagcgtttcaagcatccc 890 Query: 873 caaggagcggaacattatacctggagttggaagatgcatctaggagagtgcggattcagg 932 | |||| |||| | ||||||||||||| |||| | || ||||||||||| ||||||| Sbjct: 891 ctcggagtggaatactatacctggagttagaagctacaggcaggagagtgcgaattcagg 950 Query: 933 gagaagctgttactgtgatggctgggaccctcctagc 969 ||||||| || | ||||||| |||| |||||| |||| Sbjct: 951 gagaagcggtcagtgtgatgactggcaccctcttagc 987 Score = 182 bits (92), Expect = 2e-42 Identities = 145/162 (89%), Gaps = 3/162 (1%) Strand = Plus / Plus Query: 86 catccaatacgccgtggtggacgcgttcgcggcggagccgttcaagggcaaccccgccgc 145 |||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||| Sbjct: 115 catccagtacgcagtggtggacgccttcacggcggagccgttcaagggcaacccagccgc 174 Query: 146 ggtgtgcctcctcgaggaggaggcggcggcggcggcggacgagcggtggatgcagtccgt 205 ||||||||||||| ||||| || || ||| || ||||||||||||||||||||||| Sbjct: 175 ggtgtgcctcctc---gaggacgccgccaaggccgccgacgagcggtggatgcagtccgt 231 Query: 206 cgccgccgagttcaacctctccgagaccgccttcctcgtccg 247 |||||||||||||||| |||||||||||||||||||| |||| Sbjct: 232 cgccgccgagttcaacatctccgagaccgccttcctcctccg 273 >ref|NM_001049214.1| Oryza sativa (japonica cultivar-group) Os01g0266500 (Os01g0266500) mRNA, complete cds Length = 1159 Score = 392 bits (198), Expect = e-105 Identities = 424/498 (85%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 482 gaagctgttcatcgagttggatttccccatggttgatctcgtggagtgcaactccgcg-a 540 |||||||||||||||| |||||||||||||| | ||||||||||||| | | |||||| | Sbjct: 518 gaagctgttcatcgagctggatttccccatgatcgatctcgtggagtacgattccgcgga 577 Query: 541 ggtgccgtcgatccccgagactctaaacggcgcacccgtcgtcagcgttcacaaatcggc 600 | || |||||| || |||||||| || ||||| | |||||||| ||| ||||| | Sbjct: 578 gacgctgtcgattccggagactctgaatggcgcccgagtcgtcagtgtttggaaatcatc 637 Query: 601 aaccgccggggacctcattgtggaactttcttcaggaaaagaggttgctgatatcattcc 660 ||||||||| |||||||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 638 aaccgccggtgacctcatcgtggaactttcttccggaaaagaggttgctgatattatccc 697 Query: 661 taacattgacgaaatcaaaaaatgtgccggcagaggagttattgttacagggccggcacc 720 ||||||| | ||||| |||||||||| || ||||||||||||||||| || || ||||| Sbjct: 698 taacattaatgaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacc 757 Query: 721 tgctggatctggatatgacttcttcacacgtttcttctgcccaaaatttggggtagatga 780 ||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||| Sbjct: 758 tgctggatctgattatgacttcttttcacgattcttctgcccaaaatttgggatagatga 817 Query: 781 ggatcctgtttgtggtagcgcacattgcgttttggcaccctattggggtggaaagctggg 840 ||||||||| ||||| ||||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 818 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 877 Query: 841 gaaacaaaaactgacagcgtttcaagcatctccaaggagcggaacattatacctggagtt 900 |||||||||||| || |||||||| || || |||||||| |||||||| ||| ||||| | Sbjct: 878 gaaacaaaaacttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagct 937 Query: 901 ggaagatgcatctaggagagtgcggattcagggagaagctgttactgtgatggctgggac 960 ||| | | |||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 938 ggacggcgagaacaggagagtccggatccagggagaagctgtcactgtgatggccgggac 997 Query: 961 cctcctagcctagcatct 978 ||| | || |||||||| Sbjct: 998 tctcttggcgtagcatct 1015 Score = 309 bits (156), Expect = 2e-80 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 68 ggaaatggccaggaaagccatccaatacgccgtggtggacgcgttcgcggcggagccgtt 127 |||||||| || ||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 77 ggaaatggtcaagaacgccatccagtacgccgtggtggacgcgttcgcggccgagccgtt 136 Query: 128 caagggcaaccccgccgcggtgtgcctcctcga---ggaggaggcggcggcggcggcgga 184 |||||||||||||||||| || |||||||| || |||||| || |||||||||||||| Sbjct: 137 caagggcaaccccgccgccgtatgcctcctggaaggggaggatgccgcggcggcggcgga 196 Query: 185 cgagcggtggatgcagtccgtcgccgccgagttcaacctctccgagaccgccttcctcgt 244 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 197 cgagcggtggatgcagtccgtcgcagccgagttcaacctctccgagaccgccttcctcat 256 Query: 245 ccgcga------ctcctccagcgccggcaccgtatccgccccgcggttccacctccgatg 298 |||||| ||||||| ||||| | ||| ||||||||||||||| |||||| || Sbjct: 257 ccgcgacccctcctcctccgccgccgccgccgacgccgccccgcggttccgcctccgctg 316 Query: 299 gttcacccccgtcgccgaggtcgagctctgcgggcacgcgacattggcctccgcgcactt 358 ||||||||||||||||||||| | |||||||| |||||||| |||| ||||| ||||| Sbjct: 317 gttcacccccgtcgccgaggtgaatctctgcggccacgcgacgctggcatccgcccactt 376 Query: 359 cctcttcac 367 ||||||||| Sbjct: 377 cctcttcac 385 >dbj|AK101084.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024I08, full insert sequence Length = 1161 Score = 385 bits (194), Expect = e-103 Identities = 423/498 (84%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 482 gaagctgttcatcgagttggatttccccatggttgatctcgtggagtgcaactccgcg-a 540 |||| ||||||||||| |||||||||||||| | ||||||||||||| | | |||||| | Sbjct: 520 gaagttgttcatcgagctggatttccccatgatcgatctcgtggagtacgattccgcgga 579 Query: 541 ggtgccgtcgatccccgagactctaaacggcgcacccgtcgtcagcgttcacaaatcggc 600 | || |||||| || |||||||| || ||||| | |||||||| ||| ||||| | Sbjct: 580 gacgctgtcgattccggagactctgaatggcgcccgagtcgtcagtgtttggaaatcatc 639 Query: 601 aaccgccggggacctcattgtggaactttcttcaggaaaagaggttgctgatatcattcc 660 ||||||||| |||||||| |||||||||||||| |||||||||||||||||||| || || Sbjct: 640 aaccgccggtgacctcatcgtggaactttcttccggaaaagaggttgctgatattatccc 699 Query: 661 taacattgacgaaatcaaaaaatgtgccggcagaggagttattgttacagggccggcacc 720 ||||||| | ||||| |||||||||| || ||||||||||||||||| || || ||||| Sbjct: 700 taacattaatgaaattaaaaaatgtgatggtagaggagttattgttacgggaccagcacc 759 Query: 721 tgctggatctggatatgacttcttcacacgtttcttctgcccaaaatttggggtagatga 780 ||||||||||| ||||||||||| |||| ||||||||||||||||||||| ||||||| Sbjct: 760 tgctggatctgattatgacttcttttcacgattcttctgcccaaaatttgggatagatga 819 Query: 781 ggatcctgtttgtggtagcgcacattgcgttttggcaccctattggggtggaaagctggg 840 ||||||||| ||||| ||||||||||| ||| ||||||| || ||||||||||||||||| Sbjct: 820 ggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctggg 879 Query: 841 gaaacaaaaactgacagcgtttcaagcatctccaaggagcggaacattatacctggagtt 900 |||||||||||| || |||||||| || || |||||||| |||||||| ||| ||||| | Sbjct: 880 gaaacaaaaacttacggcgtttcaggcttcgccaaggagtggaacattgtacttggagct 939 Query: 901 ggaagatgcatctaggagagtgcggattcagggagaagctgttactgtgatggctgggac 960 ||| | | |||||||| ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 940 ggacggcgagaacaggagagtccggatccagggagaagctgtcactgtgatggccgggac 999 Query: 961 cctcctagcctagcatct 978 ||| | || |||||||| Sbjct: 1000 tctcttggcgtagcatct 1017 Score = 309 bits (156), Expect = 2e-80 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 68 ggaaatggccaggaaagccatccaatacgccgtggtggacgcgttcgcggcggagccgtt 127 |||||||| || ||| |||||||| |||||||||||||||||||||||||| |||||||| Sbjct: 79 ggaaatggtcaagaacgccatccagtacgccgtggtggacgcgttcgcggccgagccgtt 138 Query: 128 caagggcaaccccgccgcggtgtgcctcctcga---ggaggaggcggcggcggcggcgga 184 |||||||||||||||||| || |||||||| || |||||| || |||||||||||||| Sbjct: 139 caagggcaaccccgccgccgtatgcctcctggaaggggaggatgccgcggcggcggcgga 198 Query: 185 cgagcggtggatgcagtccgtcgccgccgagttcaacctctccgagaccgccttcctcgt 244 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 199 cgagcggtggatgcagtccgtcgcagccgagttcaacctctccgagaccgccttcctcat 258 Query: 245 ccgcga------ctcctccagcgccggcaccgtatccgccccgcggttccacctccgatg 298 |||||| ||||||| ||||| | ||| ||||||||||||||| |||||| || Sbjct: 259 ccgcgacccctcctcctccgccgccgccgccgacgccgccccgcggttccgcctccgctg 318 Query: 299 gttcacccccgtcgccgaggtcgagctctgcgggcacgcgacattggcctccgcgcactt 358 ||||||||||||||||||||| | |||||||| |||||||| |||| ||||| ||||| Sbjct: 319 gttcacccccgtcgccgaggtgaatctctgcggccacgcgacgctggcatccgcccactt 378 Query: 359 cctcttcac 367 ||||||||| Sbjct: 379 cctcttcac 387 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 248 bits (125), Expect = 5e-62 Identities = 204/230 (88%), Gaps = 9/230 (3%) Strand = Plus / Minus Query: 101 ggtggacgcgttcgcggcggagccgttcaagggcaaccccgccgcggtgtgcctcctcga 160 |||||||||||||||||| |||||||||||||||||||||||||| || |||||||| || Sbjct: 9116217 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 9116158 Query: 161 ---ggaggaggcggcggcggcggcggacgagcggtggatgcagtccgtcgccgccgagtt 217 |||||| || |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 9116157 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 9116098 Query: 218 caacctctccgagaccgccttcctcgtccgcga------ctcctccagcgccggcaccgt 271 ||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||| Sbjct: 9116097 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 9116038 Query: 272 atccgccccgcggttccacctccgatggttcacccccgtcgccgaggtcg 321 ||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 9116037 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtcg 9115988 Score = 180 bits (91), Expect = 1e-41 Identities = 145/163 (88%) Strand = Plus / Minus Query: 620 gtggaactttcttcaggaaaagaggttgctgatatcattcctaacattgacgaaatcaaa 679 |||||||||||||| |||||||||||||||||||| || ||||||||| | ||||| ||| Sbjct: 9114992 gtggaactttcttccggaaaagaggttgctgatattatccctaacattaatgaaattaaa 9114933 Query: 680 aaatgtgccggcagaggagttattgttacagggccggcacctgctggatctggatatgac 739 ||||||| || ||||||||||||||||| || || |||||||||||||||| |||||| Sbjct: 9114932 aaatgtgatggtagaggagttattgttacgggaccagcacctgctggatctgattatgac 9114873 Query: 740 ttcttcacacgtttcttctgcccaaaatttggggtagatgagg 782 ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 9114872 ttcttttcacgattcttctgcccaaaatttgggatagatgagg 9114830 Score = 105 bits (53), Expect = 5e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 780 aggatcctgtttgtggtagcgcacattgcgttttggcaccctattggggtggaaagctgg 839 |||||||||| ||||| ||||||||||| ||| ||||||| || |||||||||||||||| Sbjct: 9114037 aggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctgg 9113978 Query: 840 ggaaacaaaaactgacagcgtttca 864 ||||||||||||| || |||||||| Sbjct: 9113977 ggaaacaaaaacttacggcgtttca 9113953 >dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0499C11 Length = 151369 Score = 248 bits (125), Expect = 5e-62 Identities = 204/230 (88%), Gaps = 9/230 (3%) Strand = Plus / Minus Query: 101 ggtggacgcgttcgcggcggagccgttcaagggcaaccccgccgcggtgtgcctcctcga 160 |||||||||||||||||| |||||||||||||||||||||||||| || |||||||| || Sbjct: 145224 ggtggacgcgttcgcggccgagccgttcaagggcaaccccgccgccgtatgcctcctgga 145165 Query: 161 ---ggaggaggcggcggcggcggcggacgagcggtggatgcagtccgtcgccgccgagtt 217 |||||| || |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 145164 aggggaggatgccgcggcggcggcggacgagcggtggatgcagtccgtcgcagccgagtt 145105 Query: 218 caacctctccgagaccgccttcctcgtccgcga------ctcctccagcgccggcaccgt 271 ||||||||||||||||||||||||| ||||||| ||||||| ||||| | ||| Sbjct: 145104 caacctctccgagaccgccttcctcatccgcgacccctcctcctccgccgccgccgccga 145045 Query: 272 atccgccccgcggttccacctccgatggttcacccccgtcgccgaggtcg 321 ||||||||||||||| |||||| ||||||||||||||||||||||||| Sbjct: 145044 cgccgccccgcggttccgcctccgctggttcacccccgtcgccgaggtcg 144995 Score = 180 bits (91), Expect = 1e-41 Identities = 145/163 (88%) Strand = Plus / Minus Query: 620 gtggaactttcttcaggaaaagaggttgctgatatcattcctaacattgacgaaatcaaa 679 |||||||||||||| |||||||||||||||||||| || ||||||||| | ||||| ||| Sbjct: 143999 gtggaactttcttccggaaaagaggttgctgatattatccctaacattaatgaaattaaa 143940 Query: 680 aaatgtgccggcagaggagttattgttacagggccggcacctgctggatctggatatgac 739 ||||||| || ||||||||||||||||| || || |||||||||||||||| |||||| Sbjct: 143939 aaatgtgatggtagaggagttattgttacgggaccagcacctgctggatctgattatgac 143880 Query: 740 ttcttcacacgtttcttctgcccaaaatttggggtagatgagg 782 ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 143879 ttcttttcacgattcttctgcccaaaatttgggatagatgagg 143837 Score = 105 bits (53), Expect = 5e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 780 aggatcctgtttgtggtagcgcacattgcgttttggcaccctattggggtggaaagctgg 839 |||||||||| ||||| ||||||||||| ||| ||||||| || |||||||||||||||| Sbjct: 143044 aggatcctgtgtgtggaagcgcacattgtgttctggcaccttactggggtggaaagctgg 142985 Query: 840 ggaaacaaaaactgacagcgtttca 864 ||||||||||||| || |||||||| Sbjct: 142984 ggaaacaaaaacttacggcgtttca 142960