BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem120e11 (980 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001073010.1| Oryza sativa (japonica cultivar-group) Os12g... 613 e-172 dbj|AK068925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 613 e-172 ref|NM_001073011.1| Oryza sativa (japonica cultivar-group) Os12g... 283 7e-73 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 240 9e-60 emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa... 240 9e-60 >ref|NM_001073010.1| Oryza sativa (japonica cultivar-group) Os12g0241000 (Os12g0241000) mRNA, complete cds Length = 811 Score = 613 bits (309), Expect = e-172 Identities = 417/453 (92%) Strand = Plus / Minus Query: 148 cgcccgcgcggcaggctgagcttctggagctgtcggaggtggagaaggtgctacgcgacg 207 |||| ||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 689 cgcctgcgcggcaggcggcgctgctggagctcccggaggtggagaaggtgctgcgcgacg 630 Query: 208 tccaggcgggcgacgtgcgggtgttccccgtcggtgagggcgggcggcacggcggcgcct 267 | | |||||| |||||||| || ||||||||||| |||||||||| ||| |||||| ||| Sbjct: 629 tgcgggcgggggacgtgcgcgtcttccccgtcggcgagggcgggctgcatggcggctcct 570 Query: 268 gcgctgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 327 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 gcgccgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 510 Query: 328 aggctcttctctataagataaagcagaagcagaagggttctgatagaatattgatgccga 387 ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 509 aggctctactctacaagataaaacagaagcagaagggttctgatagaatattgatgccaa 450 Query: 388 gtgtagagggccagcaagctggaaagtggattgtcattgattctggaagtatcatcatcc 447 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 449 gtgttgaaggccagcaagctggaaagtggattgtcattgattctggaagtatcatcattc 390 Query: 448 atgcgcttgaagaaagagcaagagagtattatgatttggaaagcatttggacaaaagagg 507 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 389 atgcacttgaagaaagagcaagagaatattatgatttggaaagcatttggacaaaagaag 330 Query: 508 tgtctcctaacatttccattcaggagttggagaccttacttgtgaagacacgccgcaggg 567 ||||||| |||||||| ||||||| ||||| || | |||||||||||||||||||||| Sbjct: 329 tgtctccaaacatttctgttcaggaattggaaacttcccttgtgaagacacgccgcaggg 270 Query: 568 accactcgcagaaacccatgaagagcatttgag 600 ||||||| ||||||||||||||||||||||||| Sbjct: 269 accactctcagaaacccatgaagagcatttgag 237 >dbj|AK068925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001D05, full insert sequence Length = 812 Score = 613 bits (309), Expect = e-172 Identities = 417/453 (92%) Strand = Plus / Plus Query: 148 cgcccgcgcggcaggctgagcttctggagctgtcggaggtggagaaggtgctacgcgacg 207 |||| ||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 124 cgcctgcgcggcaggcggcgctgctggagctcccggaggtggagaaggtgctgcgcgacg 183 Query: 208 tccaggcgggcgacgtgcgggtgttccccgtcggtgagggcgggcggcacggcggcgcct 267 | | |||||| |||||||| || ||||||||||| |||||||||| ||| |||||| ||| Sbjct: 184 tgcgggcgggggacgtgcgcgtcttccccgtcggcgagggcgggctgcatggcggctcct 243 Query: 268 gcgctgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 327 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 gcgccgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 303 Query: 328 aggctcttctctataagataaagcagaagcagaagggttctgatagaatattgatgccga 387 ||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 304 aggctctactctacaagataaaacagaagcagaagggttctgatagaatattgatgccaa 363 Query: 388 gtgtagagggccagcaagctggaaagtggattgtcattgattctggaagtatcatcatcc 447 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 364 gtgttgaaggccagcaagctggaaagtggattgtcattgattctggaagtatcatcattc 423 Query: 448 atgcgcttgaagaaagagcaagagagtattatgatttggaaagcatttggacaaaagagg 507 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 424 atgcacttgaagaaagagcaagagaatattatgatttggaaagcatttggacaaaagaag 483 Query: 508 tgtctcctaacatttccattcaggagttggagaccttacttgtgaagacacgccgcaggg 567 ||||||| |||||||| ||||||| ||||| || | |||||||||||||||||||||| Sbjct: 484 tgtctccaaacatttctgttcaggaattggaaacttcccttgtgaagacacgccgcaggg 543 Query: 568 accactcgcagaaacccatgaagagcatttgag 600 ||||||| ||||||||||||||||||||||||| Sbjct: 544 accactctcagaaacccatgaagagcatttgag 576 >ref|NM_001073011.1| Oryza sativa (japonica cultivar-group) Os12g0241100 (Os12g0241100) mRNA, complete cds Length = 549 Score = 283 bits (143), Expect = 7e-73 Identities = 170/179 (94%) Strand = Plus / Plus Query: 345 ataaagcagaagcagaagggttctgatagaatattgatgccgagtgtagagggccagcaa 404 ||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||||| Sbjct: 316 ataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagcaa 375 Query: 405 gctggaaagtggattgtcattgattctggaagtatcatcatccatgcgcttgaagaaaga 464 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 376 gctggaaagtggattgtcattgattctggaagtatcatcattcatgcacttgaagaaaga 435 Query: 465 gcaagagagtattatgatttggaaagcatttggacaaaagaggtgtctcctaacatttc 523 |||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 436 gcaagagaatattatgatttggaaagcatttggacaaaagaagtgtctccaaacatttc 494 Score = 192 bits (97), Expect = 2e-45 Identities = 148/165 (89%) Strand = Plus / Plus Query: 148 cgcccgcgcggcaggctgagcttctggagctgtcggaggtggagaaggtgctacgcgacg 207 |||| ||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 101 cgcctgcgcggcaggcggcgctgctggagctcccggaggtggagaaggtgctgcgcgacg 160 Query: 208 tccaggcgggcgacgtgcgggtgttccccgtcggtgagggcgggcggcacggcggcgcct 267 | | |||||| |||||||| || ||||||||||| |||||||||| ||| |||||| ||| Sbjct: 161 tgcgggcgggggacgtgcgcgtcttccccgtcggcgagggcgggctgcatggcggctcct 220 Query: 268 gcgctgactacatggtcgtcgccaccggccgctccgactggcacg 312 |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gcgccgactacatggtcgtcgccaccggccgctccgactggcacg 265 >dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 240 bits (121), Expect = 9e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 148 cgcccgcgcggcaggctgagcttctggagctgtcggaggtggagaaggtgctacgcgacg 207 |||| ||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 7823935 cgcctgcgcggcaggcggcgctgctggagctcccggaggtggagaaggtgctgcgcgacg 7823876 Query: 208 tccaggcgggcgacgtgcgggtgttccccgtcggtgagggcgggcggcacggcggcgcct 267 | | |||||| |||||||| || ||||||||||| |||||||||| ||| |||||| ||| Sbjct: 7823875 tgcgggcgggggacgtgcgcgtcttccccgtcggcgagggcgggctgcatggcggctcct 7823816 Query: 268 gcgctgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 327 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7823815 gcgccgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 7823756 Query: 328 aggctcttctcta 340 ||||||| ||||| Sbjct: 7823755 aggctctactcta 7823743 Score = 149 bits (75), Expect = 2e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 343 agataaagcagaagcagaagggttctgatagaatattgatgccgagtgtagagggccagc 402 ||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 7822029 agataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagc 7821970 Query: 403 aagctggaaagtggattgtcattgattctgg 433 ||||||||||||||||||||||||||||||| Sbjct: 7821969 aagctggaaagtggattgtcattgattctgg 7821939 Score = 143 bits (72), Expect = 2e-30 Identities = 87/92 (94%) Strand = Plus / Minus Query: 432 ggaagtatcatcatccatgcgcttgaagaaagagcaagagagtattatgatttggaaagc 491 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 7821182 ggaagtatcatcattcatgcacttgaagaaagagcaagagaatattatgatttggaaagc 7821123 Query: 492 atttggacaaaagaggtgtctcctaacatttc 523 |||||||||||||| |||||||| |||||||| Sbjct: 7821122 atttggacaaaagaagtgtctccaaacatttc 7821091 Score = 101 bits (51), Expect = 5e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 546 cttgtgaagacacgccgcagggaccactcgcagaaacccatgaagagcatttgag 600 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 7819614 cttgtgaagacacgccgcagggaccactctcagaaacccatgaagagcatttgag 7819560 >emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146055 Score = 240 bits (121), Expect = 9e-60 Identities = 175/193 (90%) Strand = Plus / Minus Query: 148 cgcccgcgcggcaggctgagcttctggagctgtcggaggtggagaaggtgctacgcgacg 207 |||| ||||||||||| | ||| |||||||| ||||||||||||||||||| ||||||| Sbjct: 122926 cgcctgcgcggcaggcggcgctgctggagctcccggaggtggagaaggtgctgcgcgacg 122867 Query: 208 tccaggcgggcgacgtgcgggtgttccccgtcggtgagggcgggcggcacggcggcgcct 267 | | |||||| |||||||| || ||||||||||| |||||||||| ||| |||||| ||| Sbjct: 122866 tgcgggcgggggacgtgcgcgtcttccccgtcggcgagggcgggctgcatggcggctcct 122807 Query: 268 gcgctgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 327 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122806 gcgccgactacatggtcgtcgccaccggccgctccgactggcacgtccgcaacatcgccc 122747 Query: 328 aggctcttctcta 340 ||||||| ||||| Sbjct: 122746 aggctctactcta 122734 Score = 149 bits (75), Expect = 2e-32 Identities = 87/91 (95%) Strand = Plus / Minus Query: 343 agataaagcagaagcagaagggttctgatagaatattgatgccgagtgtagagggccagc 402 ||||||| ||||||||||||||||||||||||||||||||||| ||||| || ||||||| Sbjct: 121020 agataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagc 120961 Query: 403 aagctggaaagtggattgtcattgattctgg 433 ||||||||||||||||||||||||||||||| Sbjct: 120960 aagctggaaagtggattgtcattgattctgg 120930 Score = 143 bits (72), Expect = 2e-30 Identities = 87/92 (94%) Strand = Plus / Minus Query: 432 ggaagtatcatcatccatgcgcttgaagaaagagcaagagagtattatgatttggaaagc 491 |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 120173 ggaagtatcatcattcatgcacttgaagaaagagcaagagaatattatgatttggaaagc 120114 Query: 492 atttggacaaaagaggtgtctcctaacatttc 523 |||||||||||||| |||||||| |||||||| Sbjct: 120113 atttggacaaaagaagtgtctccaaacatttc 120082 Score = 101 bits (51), Expect = 5e-18 Identities = 54/55 (98%) Strand = Plus / Minus Query: 546 cttgtgaagacacgccgcagggaccactcgcagaaacccatgaagagcatttgag 600 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118605 cttgtgaagacacgccgcagggaccactctcagaaacccatgaagagcatttgag 118551