BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem120c20 (945 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001074299.1| Oryza sativa (japonica cultivar-group) Os11g... 117 8e-23 dbj|AK106317.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 8e-23 gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 94 1e-15 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 94 1e-15 >ref|NM_001074299.1| Oryza sativa (japonica cultivar-group) Os11g0421800 (Os11g0421800) mRNA, complete cds Length = 1154 Score = 117 bits (59), Expect = 8e-23 Identities = 115/133 (86%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 380 ggtggtcaaagctgtggacgaagacctctacgagatcccacccgacatgctctgccacaa 439 ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 478 ggtggtcaaggccgtggaccgggacctctacgagatcccacccgacatgctctgcaacaa 537 Query: 440 gccaaggaagaagaggctgacgaggagcctgtggatgagttgcctggggttcaactgcat 499 |||||| ||||||| |||| ||||||||||||||| | |||||||| ||| |||| | Sbjct: 538 gccaag---gaagagggtgaccaggagcctgtggatggggtgcctgggactcagctgcgt 594 Query: 500 ggcctagggatct 512 |||||||||||| Sbjct: 595 tgcctagggatct 607 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 108 ggctacggatacggcgacggcgactggccggtcacccagtacttcgacgccgccatgcag 167 |||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 167 ggctacggctaccgcgacggcgactggccggtcacacagtacttcgactccgccatgcag 226 Query: 168 gcc 170 ||| Sbjct: 227 gcc 229 Score = 77.8 bits (39), Expect = 7e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 56 gaggcagcggcgcatcccggcgttcggggagtggaactacgac 98 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88 gaggcggcggcgcatcccggcgttcggggagtggaactacgac 130 >dbj|AK106317.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E02, full insert sequence Length = 1154 Score = 117 bits (59), Expect = 8e-23 Identities = 115/133 (86%), Gaps = 3/133 (2%) Strand = Plus / Plus Query: 380 ggtggtcaaagctgtggacgaagacctctacgagatcccacccgacatgctctgccacaa 439 ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 478 ggtggtcaaggccgtggaccgggacctctacgagatcccacccgacatgctctgcaacaa 537 Query: 440 gccaaggaagaagaggctgacgaggagcctgtggatgagttgcctggggttcaactgcat 499 |||||| ||||||| |||| ||||||||||||||| | |||||||| ||| |||| | Sbjct: 538 gccaag---gaagagggtgaccaggagcctgtggatggggtgcctgggactcagctgcgt 594 Query: 500 ggcctagggatct 512 |||||||||||| Sbjct: 595 tgcctagggatct 607 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Plus Query: 108 ggctacggatacggcgacggcgactggccggtcacccagtacttcgacgccgccatgcag 167 |||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 167 ggctacggctaccgcgacggcgactggccggtcacacagtacttcgactccgccatgcag 226 Query: 168 gcc 170 ||| Sbjct: 227 gcc 229 Score = 77.8 bits (39), Expect = 7e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 56 gaggcagcggcgcatcccggcgttcggggagtggaactacgac 98 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88 gaggcggcggcgcatcccggcgttcggggagtggaactacgac 130 >gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09 map near S6115, complete sequence Length = 215240 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 108 ggctacggatacggcgacggcgactggccggtcacccagtacttcgacgccgccatgcag 167 |||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 26705 ggctacggctaccgcgacggcgactggccggtcacacagtacttcgactccgccatgcag 26646 Query: 168 gcc 170 ||| Sbjct: 26645 gcc 26643 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 380 ggtggtcaaagctgtggacgaagacctctacgagatcccacccgacatgctctgccacaa 439 ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 26094 ggtggtcaaggccgtggaccgggacctctacgagatcccacccgacatgctctgcaacaa 26035 Query: 440 gccaagg 446 ||||||| Sbjct: 26034 gccaagg 26028 Score = 77.8 bits (39), Expect = 7e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 56 gaggcagcggcgcatcccggcgttcggggagtggaactacgac 98 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 26784 gaggcggcggcgcatcccggcgttcggggagtggaactacgac 26742 >dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 93.7 bits (47), Expect = 1e-15 Identities = 59/63 (93%) Strand = Plus / Minus Query: 108 ggctacggatacggcgacggcgactggccggtcacccagtacttcgacgccgccatgcag 167 |||||||| ||| |||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 12644029 ggctacggctaccgcgacggcgactggccggtcacacagtacttcgactccgccatgcag 12643970 Query: 168 gcc 170 ||| Sbjct: 12643969 gcc 12643967 Score = 85.7 bits (43), Expect = 3e-13 Identities = 61/67 (91%) Strand = Plus / Minus Query: 380 ggtggtcaaagctgtggacgaagacctctacgagatcccacccgacatgctctgccacaa 439 ||||||||| || |||||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 12643418 ggtggtcaaggccgtggaccgggacctctacgagatcccacccgacatgctctgcaacaa 12643359 Query: 440 gccaagg 446 ||||||| Sbjct: 12643358 gccaagg 12643352 Score = 77.8 bits (39), Expect = 7e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 56 gaggcagcggcgcatcccggcgttcggggagtggaactacgac 98 ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12644108 gaggcggcggcgcatcccggcgttcggggagtggaactacgac 12644066