BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem119o13
         (1127 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001048846.1| Oryza sativa (japonica cultivar-group) Os01g...   244   7e-61
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...   244   7e-61
dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D...   244   7e-61
ref|NM_001064381.1| Oryza sativa (japonica cultivar-group) Os06g...    86   4e-13
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...    86   4e-13

>ref|NM_001048846.1| Oryza sativa (japonica cultivar-group) Os01g0199700 (Os01g0199700)
           mRNA, complete cds
          Length = 615

 Score =  244 bits (123), Expect = 7e-61
 Identities = 179/197 (90%), Gaps = 3/197 (1%)
 Strand = Plus / Plus

                                                                       
Query: 448 cggaggaggcgctggcggcgcacatgagcgtgtgcggccggttcaaccgcgtggggcgcg 507
           ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||
Sbjct: 419 cggaggaggcgctggcggcgcacatggcggtgtgcgggcggttcaaccgcgtggggcgcg 478

                                                                       
Query: 508 ccaaccctgtgctcatgcagacggaggccatgagggagatcctcaggaagcggtccgcgt 567
           ||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||   ||
Sbjct: 479 ccaacccggtgctgatgcagacggaggccatgagggagatcctccgcaagaggtcgaggt 538

                                                                       
Query: 568 ccaacagccccagggaccacgccaatggcggcaccctcaccaggagctccagctgcatcc 627
           |||||||||| |||||||||| | |||||||   ||||||||||||||||||||||||||
Sbjct: 539 ccaacagcccgagggaccacggccatggcgg---cctcaccaggagctccagctgcatcc 595

                            
Query: 628 ccgccattaccaaggac 644
           |||||||||||||||||
Sbjct: 596 ccgccattaccaaggac 612



 Score =  184 bits (93), Expect = 5e-43
 Identities = 129/141 (91%)
 Strand = Plus / Plus

                                                                       
Query: 293 ggtggaggacgcgcggtgcgagtgctgcggcatgctggaggagtgcacccccgagtacgt 352
           ||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||| 
Sbjct: 240 ggtggaggaggcgcggtgcgagtgctgcggcatgcaggaggagtgcacgccggagtacgc 299

                                                                       
Query: 353 gcggcgcgtgcgggagcggtactgcgggcggtgggtgtgcggcctgtgcgccgcggcggt 412
           ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 300 gcgccgcgtccgggagcgctactgcgggcggtgggtgtgcggcctgtgcgccgccgcggc 359

                                
Query: 413 gagcggcgaggcggacaggag 433
           ||||| |||||| ||||||||
Sbjct: 360 gagcgccgaggccgacaggag 380



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                       
Query: 163 agaagccgcggaggatctcgatggaggggctccagcgcgcgatgtccgacctggccctgg 222
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 86  agaagccgcggaggatctcgatggaggggctccagcgcgccatgtccgacctggccctgg 145

                      
Query: 223 agctctccaag 233
           ||||| |||||
Sbjct: 146 agctcaccaag 156


>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score =  244 bits (123), Expect = 7e-61
 Identities = 179/197 (90%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                           
Query: 448     cggaggaggcgctggcggcgcacatgagcgtgtgcggccggttcaaccgcgtggggcgcg 507
               ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||
Sbjct: 5400597 cggaggaggcgctggcggcgcacatggcggtgtgcgggcggttcaaccgcgtggggcgcg 5400538

                                                                           
Query: 508     ccaaccctgtgctcatgcagacggaggccatgagggagatcctcaggaagcggtccgcgt 567
               ||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||   ||
Sbjct: 5400537 ccaacccggtgctgatgcagacggaggccatgagggagatcctccgcaagaggtcgaggt 5400478

                                                                           
Query: 568     ccaacagccccagggaccacgccaatggcggcaccctcaccaggagctccagctgcatcc 627
               |||||||||| |||||||||| | |||||||   ||||||||||||||||||||||||||
Sbjct: 5400477 ccaacagcccgagggaccacggccatggcgg---cctcaccaggagctccagctgcatcc 5400421

                                
Query: 628     ccgccattaccaaggac 644
               |||||||||||||||||
Sbjct: 5400420 ccgccattaccaaggac 5400404



 Score =  184 bits (93), Expect = 5e-43
 Identities = 129/141 (91%)
 Strand = Plus / Minus

                                                                           
Query: 293     ggtggaggacgcgcggtgcgagtgctgcggcatgctggaggagtgcacccccgagtacgt 352
               ||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||| 
Sbjct: 5400776 ggtggaggaggcgcggtgcgagtgctgcggcatgcaggaggagtgcacgccggagtacgc 5400717

                                                                           
Query: 353     gcggcgcgtgcgggagcggtactgcgggcggtgggtgtgcggcctgtgcgccgcggcggt 412
               ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5400716 gcgccgcgtccgggagcgctactgcgggcggtgggtgtgcggcctgtgcgccgccgcggc 5400657

                                    
Query: 413     gagcggcgaggcggacaggag 433
               ||||| |||||| ||||||||
Sbjct: 5400656 gagcgccgaggccgacaggag 5400636



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                           
Query: 163     agaagccgcggaggatctcgatggaggggctccagcgcgcgatgtccgacctggccctgg 222
               |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5400930 agaagccgcggaggatctcgatggaggggctccagcgcgccatgtccgacctggccctgg 5400871

                          
Query: 223     agctctccaag 233
               ||||| |||||
Sbjct: 5400870 agctcaccaag 5400860


>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1046G12
          Length = 163533

 Score =  244 bits (123), Expect = 7e-61
 Identities = 179/197 (90%), Gaps = 3/197 (1%)
 Strand = Plus / Minus

                                                                          
Query: 448    cggaggaggcgctggcggcgcacatgagcgtgtgcggccggttcaaccgcgtggggcgcg 507
              ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||
Sbjct: 151941 cggaggaggcgctggcggcgcacatggcggtgtgcgggcggttcaaccgcgtggggcgcg 151882

                                                                          
Query: 508    ccaaccctgtgctcatgcagacggaggccatgagggagatcctcaggaagcggtccgcgt 567
              ||||||| ||||| |||||||||||||||||||||||||||||| | ||| ||||   ||
Sbjct: 151881 ccaacccggtgctgatgcagacggaggccatgagggagatcctccgcaagaggtcgaggt 151822

                                                                          
Query: 568    ccaacagccccagggaccacgccaatggcggcaccctcaccaggagctccagctgcatcc 627
              |||||||||| |||||||||| | |||||||   ||||||||||||||||||||||||||
Sbjct: 151821 ccaacagcccgagggaccacggccatggcgg---cctcaccaggagctccagctgcatcc 151765

                               
Query: 628    ccgccattaccaaggac 644
              |||||||||||||||||
Sbjct: 151764 ccgccattaccaaggac 151748



 Score =  184 bits (93), Expect = 5e-43
 Identities = 129/141 (91%)
 Strand = Plus / Minus

                                                                          
Query: 293    ggtggaggacgcgcggtgcgagtgctgcggcatgctggaggagtgcacccccgagtacgt 352
              ||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||| 
Sbjct: 152120 ggtggaggaggcgcggtgcgagtgctgcggcatgcaggaggagtgcacgccggagtacgc 152061

                                                                          
Query: 353    gcggcgcgtgcgggagcggtactgcgggcggtgggtgtgcggcctgtgcgccgcggcggt 412
              ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 152060 gcgccgcgtccgggagcgctactgcgggcggtgggtgtgcggcctgtgcgccgccgcggc 152001

                                   
Query: 413    gagcggcgaggcggacaggag 433
              ||||| |||||| ||||||||
Sbjct: 152000 gagcgccgaggccgacaggag 151980



 Score =  125 bits (63), Expect = 4e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                          
Query: 163    agaagccgcggaggatctcgatggaggggctccagcgcgcgatgtccgacctggccctgg 222
              |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 152274 agaagccgcggaggatctcgatggaggggctccagcgcgccatgtccgacctggccctgg 152215

                         
Query: 223    agctctccaag 233
              ||||| |||||
Sbjct: 152214 agctcaccaag 152204


>ref|NM_001064381.1| Oryza sativa (japonica cultivar-group) Os06g0554200 (Os06g0554200)
           mRNA, complete cds
          Length = 642

 Score = 85.7 bits (43), Expect = 4e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 292 aggtggaggacgcgcggtgcgagtgctgcggcatgctggaggagtgcacccccgagtac 350
           |||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||
Sbjct: 224 aggtggaggacgcgcggtgcgagtgctgcggcatgtcggaggagtgcacgccggagtac 282


>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 85.7 bits (43), Expect = 4e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 292      aggtggaggacgcgcggtgcgagtgctgcggcatgctggaggagtgcacccccgagtac 350
                |||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||
Sbjct: 20715900 aggtggaggacgcgcggtgcgagtgctgcggcatgtcggaggagtgcacgccggagtac 20715842