BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem119i04 (1097 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001066520.1| Oryza sativa (japonica cultivar-group) Os07g... 365 3e-97 dbj|AK072982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 3e-97 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 204 5e-49 dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic D... 204 5e-49 dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic D... 204 5e-49 >ref|NM_001066520.1| Oryza sativa (japonica cultivar-group) Os07g0561300 (Os07g0561300) mRNA, complete cds Length = 1145 Score = 365 bits (184), Expect = 3e-97 Identities = 358/414 (86%), Gaps = 9/414 (2%) Strand = Plus / Plus Query: 316 gcagcagcacaaggatcctggggaggaagagggtcgccgtctcgccggctccgagcccct 375 |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 378 gcagcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgcccccct 437 Query: 376 ccggc---ccgcattcgccggtgcgggctctgcgcaagcagcgcagcactaggctccaca 432 ||||| ||||| |||||||||||| |||| ||||||||||| ||||| |||||||||| Sbjct: 438 ccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctccaca 497 Query: 433 tggacgacgccataggccttcttgaatcactgcctcaagatgtcttggtcaaagtcttgt 492 ||||||||||| | |||| || |||||||||||||||||||||||| | || ||||||| Sbjct: 498 tggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtcttgt 557 Query: 493 gcaaggtgaaccatagcgacttgaggcagcttctcctcgtgtcgaaaccagtcagtgaag 552 ||||||||||||| || ||| |||||| ||| ||||| ||||| |||| ||| || |||| Sbjct: 558 gcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcgaag 617 Query: 553 caacggtagttgctagagagctgcatttcgccttcgcgacgccgtcctcgaaggccgcct 612 ||||||| ||||| ||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 618 caacggtggttgcgagagagcagcatttcgcgtttgcgacgccatcctcgaaggccgcct 677 Query: 613 tcagaggcgaggaggaggaggaggaaggccccggggcgcccaa---gcaacacagggttg 669 | ||||||| |||||||| || |||| |||||||||||||| ||||| |||||||| Sbjct: 678 tgagaggcggcgaggaggaagaagaagctcccggggcgcccaagctgcaacgcagggttg 737 Query: 670 caag---gtcgcgcgtccggggcaagaacctggcgagcatcgccgtcaacctgt 720 | || ||||| |||| ||||||||||||| || |||||| ||||||||||| Sbjct: 738 cgaggtcgtcgcccgtctggggcaagaaccttgccagcatcagcgtcaacctgt 791 >dbj|AK072982.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149I22, full insert sequence Length = 1146 Score = 365 bits (184), Expect = 3e-97 Identities = 358/414 (86%), Gaps = 9/414 (2%) Strand = Plus / Plus Query: 316 gcagcagcacaaggatcctggggaggaagagggtcgccgtctcgccggctccgagcccct 375 |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 379 gcagcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgcccccct 438 Query: 376 ccggc---ccgcattcgccggtgcgggctctgcgcaagcagcgcagcactaggctccaca 432 ||||| ||||| |||||||||||| |||| ||||||||||| ||||| |||||||||| Sbjct: 439 ccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctccaca 498 Query: 433 tggacgacgccataggccttcttgaatcactgcctcaagatgtcttggtcaaagtcttgt 492 ||||||||||| | |||| || |||||||||||||||||||||||| | || ||||||| Sbjct: 499 tggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttgattaaggtcttgt 558 Query: 493 gcaaggtgaaccatagcgacttgaggcagcttctcctcgtgtcgaaaccagtcagtgaag 552 ||||||||||||| || ||| |||||| ||| ||||| ||||| |||| ||| || |||| Sbjct: 559 gcaaggtgaaccacagtgacctgaggccgctgctcctagtgtcaaaacaagttagcgaag 618 Query: 553 caacggtagttgctagagagctgcatttcgccttcgcgacgccgtcctcgaaggccgcct 612 ||||||| ||||| ||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 619 caacggtggttgcgagagagcagcatttcgcgtttgcgacgccatcctcgaaggccgcct 678 Query: 613 tcagaggcgaggaggaggaggaggaaggccccggggcgcccaa---gcaacacagggttg 669 | ||||||| |||||||| || |||| |||||||||||||| ||||| |||||||| Sbjct: 679 tgagaggcggcgaggaggaagaagaagctcccggggcgcccaagctgcaacgcagggttg 738 Query: 670 caag---gtcgcgcgtccggggcaagaacctggcgagcatcgccgtcaacctgt 720 | || ||||| |||| ||||||||||||| || |||||| ||||||||||| Sbjct: 739 cgaggtcgtcgcccgtctggggcaagaaccttgccagcatcagcgtcaacctgt 792 >dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 204 bits (103), Expect = 5e-49 Identities = 153/169 (90%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 316 gcagcagcacaaggatcctggggaggaagagggtcgccgtctcgccggctccgagcccct 375 |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22358648 gcagcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgcccccct 22358589 Query: 376 ccggc---ccgcattcgccggtgcgggctctgcgcaagcagcgcagcactaggctccaca 432 ||||| ||||| |||||||||||| |||| ||||||||||| ||||| |||||||||| Sbjct: 22358588 ccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctccaca 22358529 Query: 433 tggacgacgccataggccttcttgaatcactgcctcaagatgtcttggt 481 ||||||||||| | |||| || |||||||||||||||||||||||||| Sbjct: 22358528 tggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 22358480 Score = 119 bits (60), Expect = 2e-23 Identities = 145/172 (84%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 555 acggtagttgctagagagctgcatttcgccttcgcgacgccgtcctcgaaggccgccttc 614 ||||| ||||| ||||||| ||||||||| || |||||||| ||||||||||||||||| Sbjct: 22358173 acggtggttgcgagagagcagcatttcgcgtttgcgacgccatcctcgaaggccgccttg 22358114 Query: 615 agaggcgaggaggaggaggaggaaggccccggggcgcccaa---gcaacacagggttgca 671 ||||||| |||||||| || |||| |||||||||||||| ||||| ||||||||| Sbjct: 22358113 agaggcggcgaggaggaagaagaagctcccggggcgcccaagctgcaacgcagggttgcg 22358054 Query: 672 ag---gtcgcgcgtccggggcaagaacctggcgagcatcgccgtcaacctgt 720 || ||||| |||| ||||||||||||| || |||||| ||||||||||| Sbjct: 22358053 aggtcgtcgcccgtctggggcaagaaccttgccagcatcagcgtcaacctgt 22358002 >dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 204 bits (103), Expect = 5e-49 Identities = 153/169 (90%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 316 gcagcagcacaaggatcctggggaggaagagggtcgccgtctcgccggctccgagcccct 375 |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 163894 gcagcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgcccccct 163835 Query: 376 ccggc---ccgcattcgccggtgcgggctctgcgcaagcagcgcagcactaggctccaca 432 ||||| ||||| |||||||||||| |||| ||||||||||| ||||| |||||||||| Sbjct: 163834 ccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctccaca 163775 Query: 433 tggacgacgccataggccttcttgaatcactgcctcaagatgtcttggt 481 ||||||||||| | |||| || |||||||||||||||||||||||||| Sbjct: 163774 tggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 163726 Score = 119 bits (60), Expect = 2e-23 Identities = 145/172 (84%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 555 acggtagttgctagagagctgcatttcgccttcgcgacgccgtcctcgaaggccgccttc 614 ||||| ||||| ||||||| ||||||||| || |||||||| ||||||||||||||||| Sbjct: 163419 acggtggttgcgagagagcagcatttcgcgtttgcgacgccatcctcgaaggccgccttg 163360 Query: 615 agaggcgaggaggaggaggaggaaggccccggggcgcccaa---gcaacacagggttgca 671 ||||||| |||||||| || |||| |||||||||||||| ||||| ||||||||| Sbjct: 163359 agaggcggcgaggaggaagaagaagctcccggggcgcccaagctgcaacgcagggttgcg 163300 Query: 672 ag---gtcgcgcgtccggggcaagaacctggcgagcatcgccgtcaacctgt 720 || ||||| |||| ||||||||||||| || |||||| ||||||||||| Sbjct: 163299 aggtcgtcgcccgtctggggcaagaaccttgccagcatcagcgtcaacctgt 163248 >dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 204 bits (103), Expect = 5e-49 Identities = 153/169 (90%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 316 gcagcagcacaaggatcctggggaggaagagggtcgccgtctcgccggctccgagcccct 375 |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19715 gcagcagcacgaggatcctggggaggaagagggtcgccgtctcgccggctccgcccccct 19656 Query: 376 ccggc---ccgcattcgccggtgcgggctctgcgcaagcagcgcagcactaggctccaca 432 ||||| ||||| |||||||||||| |||| ||||||||||| ||||| |||||||||| Sbjct: 19655 ccggcggcccgcactcgccggtgcggactctccgcaagcagcggagcaccaggctccaca 19596 Query: 433 tggacgacgccataggccttcttgaatcactgcctcaagatgtcttggt 481 ||||||||||| | |||| || |||||||||||||||||||||||||| Sbjct: 19595 tggacgacgccgtcagcctgctcgaatcactgcctcaagatgtcttggt 19547 Score = 119 bits (60), Expect = 2e-23 Identities = 145/172 (84%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 555 acggtagttgctagagagctgcatttcgccttcgcgacgccgtcctcgaaggccgccttc 614 ||||| ||||| ||||||| ||||||||| || |||||||| ||||||||||||||||| Sbjct: 19240 acggtggttgcgagagagcagcatttcgcgtttgcgacgccatcctcgaaggccgccttg 19181 Query: 615 agaggcgaggaggaggaggaggaaggccccggggcgcccaa---gcaacacagggttgca 671 ||||||| |||||||| || |||| |||||||||||||| ||||| ||||||||| Sbjct: 19180 agaggcggcgaggaggaagaagaagctcccggggcgcccaagctgcaacgcagggttgcg 19121 Query: 672 ag---gtcgcgcgtccggggcaagaacctggcgagcatcgccgtcaacctgt 720 || ||||| |||| ||||||||||||| || |||||| ||||||||||| Sbjct: 19120 aggtcgtcgcccgtctggggcaagaaccttgccagcatcagcgtcaacctgt 19069