BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem119b18 (830 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|AK241337.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 458 e-125 ref|NM_001059297.1| Oryza sativa (japonica cultivar-group) Os04g... 456 e-125 dbj|AK242123.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 391 e-105 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 202 2e-48 emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4,... 202 2e-48 >dbj|AK241337.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065144L23, full insert sequence Length = 1896 Score = 458 bits (231), Expect = e-125 Identities = 397/450 (88%), Gaps = 3/450 (0%) Strand = Plus / Plus Query: 186 ggcggctgtccgccgtccaggaaacgaaggaggaggaggcgaagacgaccgaggagctca 245 ||||||| |||||||| ||||| || ||||||| |||||| ||||| |||||||| ||| Sbjct: 205 ggcggctctccgccgtgcaggagaccaaggagggggaggcccagacggccgaggagatca 264 Query: 246 cggagaagtacggcctcgagttcggcctctggaaaatatttagctccaaggaggagggaa 305 | ||||||||||||||||||||||||||||||||| | || ||||||||||| |||| | Sbjct: 265 ccgagaagtacggcctcgagttcggcctctggaaagtgttcagctccaagga--agggga 322 Query: 306 gcgaggaaggggaggggaagaagaagtcgaggaccgaccaggcgaaggagctcctggcca 365 | ||||| | || | || || |||||||||||| || |||||||||||||||||||||| Sbjct: 323 g-gaggaggaggggaagacgaggaagtcgaggacggagcaggcgaaggagctcctggcca 381 Query: 366 agtacggcggcgcgtacctggccacctcgatcacgctctccctcatctccttcaccgcct 425 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 382 agtacggcggcgcgtacctggcgacctcgatcacgctctcgctcatctccttcacgctct 441 Query: 426 gctacctcctcatcagcgctggcatcgacgtccagcagctgctcggcaaggttgggatcg 485 ||||||||||| ||||||| ||| ||||||| ||| | || ||||||||||||||||||| Sbjct: 442 gctacctcctcgtcagcgccggcgtcgacgtgcaggacctcctcggcaaggttgggatcg 501 Query: 486 ccgcggacgagaccggagggaaggtcgggacgttcgcgctggcctacgccgcgcacaagg 545 | ||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 502 cgacgggggagacgggagggaaggtggggacgttcgcgctggcctacgcggcgcacaagg 561 Query: 546 cagcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtcgtggccaactgga 605 | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 562 cggcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtggtggccagctgga 621 Query: 606 tagggaagctcaggaagggggacgactgat 635 | |||| | ||| |||||||| |||||||| Sbjct: 622 ttgggaggatcaagaaggggggcgactgat 651 >ref|NM_001059297.1| Oryza sativa (japonica cultivar-group) Os04g0416000 (Os04g0416000) mRNA, complete cds Length = 564 Score = 456 bits (230), Expect = e-125 Identities = 396/449 (88%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 186 ggcggctgtccgccgtccaggaaacgaaggaggaggaggcgaagacgaccgaggagctca 245 ||||||| |||||||| ||||| || ||||||| |||||| ||||| |||||||| ||| Sbjct: 119 ggcggctctccgccgtgcaggagaccaaggagggggaggcccagacggccgaggagatca 178 Query: 246 cggagaagtacggcctcgagttcggcctctggaaaatatttagctccaaggaggagggaa 305 | ||||||||||||||||||||||||||||||||| | || ||||||||||| |||| | Sbjct: 179 ccgagaagtacggcctcgagttcggcctctggaaagtgttcagctccaagga--agggga 236 Query: 306 gcgaggaaggggaggggaagaagaagtcgaggaccgaccaggcgaaggagctcctggcca 365 | ||||| | || | || || |||||||||||| || |||||||||||||||||||||| Sbjct: 237 g-gaggaggaggggaagacgaggaagtcgaggacggagcaggcgaaggagctcctggcca 295 Query: 366 agtacggcggcgcgtacctggccacctcgatcacgctctccctcatctccttcaccgcct 425 |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| || Sbjct: 296 agtacggcggcgcgtacctggcgacctcgatcacgctctcgctcatctccttcacgctct 355 Query: 426 gctacctcctcatcagcgctggcatcgacgtccagcagctgctcggcaaggttgggatcg 485 ||||||||||| ||||||| ||| ||||||| ||| | || ||||||||||||||||||| Sbjct: 356 gctacctcctcgtcagcgccggcgtcgacgtgcaggacctcctcggcaaggttgggatcg 415 Query: 486 ccgcggacgagaccggagggaaggtcgggacgttcgcgctggcctacgccgcgcacaagg 545 | ||| ||||| ||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 416 cgacgggggagacgggagggaaggtggggacgttcgcgctggcctacgcggcgcacaagg 475 Query: 546 cagcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtcgtggccaactgga 605 | |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 476 cggcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtggtggccagctgga 535 Query: 606 tagggaagctcaggaagggggacgactga 634 | |||| | ||| |||||||| ||||||| Sbjct: 536 ttgggaggatcaagaaggggggcgactga 564 >dbj|AK242123.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075147L14, full insert sequence Length = 3705 Score = 391 bits (197), Expect = e-105 Identities = 333/376 (88%), Gaps = 3/376 (0%) Strand = Plus / Minus Query: 260 ctcgagttcggcctctggaaaatatttagctccaaggaggagggaagcgaggaaggggag 319 ||||||||||||||||||||| | || ||||||||||| |||| || ||||| | || | Sbjct: 2832 ctcgagttcggcctctggaaagtgttcagctccaagga--aggggag-gaggaggagggg 2776 Query: 320 gggaagaagaagtcgaggaccgaccaggcgaaggagctcctggccaagtacggcggcgcg 379 || || |||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 2775 aagacgaggaagtcgaggacggagcaggcgaaggagctcctggccaagtacggcggcgcg 2716 Query: 380 tacctggccacctcgatcacgctctccctcatctccttcaccgcctgctacctcctcatc 439 |||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| || Sbjct: 2715 tacctggcgacctcgatcacgctctcgctcatctccttcacgctctgctacctcctcgtc 2656 Query: 440 agcgctggcatcgacgtccagcagctgctcggcaaggttgggatcgccgcggacgagacc 499 ||||| ||| ||||||| ||| | || |||||||||||||||||||| ||| ||||| Sbjct: 2655 agcgccggcgtcgacgtgcaggacctcctcggcaaggttgggatcgcgacgggggagacg 2596 Query: 500 ggagggaaggtcgggacgttcgcgctggcctacgccgcgcacaaggcagcgtcgccgatc 559 ||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 2595 ggagggaaggtggggacgttcgcgctggcctacgcggcgcacaaggcggcgtcgccgatc 2536 Query: 560 aggttcccgccgacggtggcgctgacgccggtcgtggccaactggatagggaagctcagg 619 |||||||||||||||||||||||||||||||| ||||||| |||||| |||| | ||| | Sbjct: 2535 aggttcccgccgacggtggcgctgacgccggtggtggccagctggattgggaggatcaag 2476 Query: 620 aagggggacgactgat 635 ||||||| |||||||| Sbjct: 2475 aaggggggcgactgat 2460 >dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 202 bits (102), Expect = 2e-48 Identities = 147/162 (90%) Strand = Plus / Plus Query: 474 aggttgggatcgccgcggacgagaccggagggaaggtcgggacgttcgcgctggcctacg 533 ||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 20558546 aggttgggatcgcgacgggggagacgggagggaaggtggggacgttcgcgctggcctacg 20558605 Query: 534 ccgcgcacaaggcagcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtcg 593 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 20558606 cggcgcacaaggcggcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtgg 20558665 Query: 594 tggccaactggatagggaagctcaggaagggggacgactgat 635 |||||| |||||| |||| | ||| |||||||| |||||||| Sbjct: 20558666 tggccagctggattgggaggatcaagaaggggggcgactgat 20558707 Score = 186 bits (94), Expect = 1e-43 Identities = 136/150 (90%) Strand = Plus / Plus Query: 328 gaagtcgaggaccgaccaggcgaaggagctcctggccaagtacggcggcgcgtacctggc 387 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20558309 gaagtcgaggacggagcaggcgaaggagctcctggccaagtacggcggcgcgtacctggc 20558368 Query: 388 cacctcgatcacgctctccctcatctccttcaccgcctgctacctcctcatcagcgctgg 447 ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| || Sbjct: 20558369 gacctcgatcacgctctcgctcatctccttcacgctctgctacctcctcgtcagcgccgg 20558428 Query: 448 catcgacgtccagcagctgctcggcaaggt 477 | ||||||| ||| | || ||||||||||| Sbjct: 20558429 cgtcgacgtgcaggacctcctcggcaaggt 20558458 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 186 ggcggctgtccgccgtccaggaaacgaaggaggaggaggcgaagacgaccgaggagctca 245 ||||||| |||||||| ||||| || ||||||| |||||| ||||| |||||||| ||| Sbjct: 20558092 ggcggctctccgccgtgcaggagaccaaggagggggaggcccagacggccgaggagatca 20558151 Query: 246 cggagaagtacggcctcgagttcggcctctggaaa 280 | ||||||||||||||||||||||||||||||||| Sbjct: 20558152 ccgagaagtacggcctcgagttcggcctctggaaa 20558186 >emb|AL606453.2|OSJN00010 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ991214_12, complete sequence Length = 116952 Score = 202 bits (102), Expect = 2e-48 Identities = 147/162 (90%) Strand = Plus / Plus Query: 474 aggttgggatcgccgcggacgagaccggagggaaggtcgggacgttcgcgctggcctacg 533 ||||||||||||| ||| ||||| ||||||||||| |||||||||||||||||||||| Sbjct: 69174 aggttgggatcgcgacgggggagacgggagggaaggtggggacgttcgcgctggcctacg 69233 Query: 534 ccgcgcacaaggcagcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtcg 593 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 69234 cggcgcacaaggcggcgtcgccgatcaggttcccgccgacggtggcgctgacgccggtgg 69293 Query: 594 tggccaactggatagggaagctcaggaagggggacgactgat 635 |||||| |||||| |||| | ||| |||||||| |||||||| Sbjct: 69294 tggccagctggattgggaggatcaagaaggggggcgactgat 69335 Score = 186 bits (94), Expect = 1e-43 Identities = 136/150 (90%) Strand = Plus / Plus Query: 328 gaagtcgaggaccgaccaggcgaaggagctcctggccaagtacggcggcgcgtacctggc 387 |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68937 gaagtcgaggacggagcaggcgaaggagctcctggccaagtacggcggcgcgtacctggc 68996 Query: 388 cacctcgatcacgctctccctcatctccttcaccgcctgctacctcctcatcagcgctgg 447 ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||| || Sbjct: 68997 gacctcgatcacgctctcgctcatctccttcacgctctgctacctcctcgtcagcgccgg 69056 Query: 448 catcgacgtccagcagctgctcggcaaggt 477 | ||||||| ||| | || ||||||||||| Sbjct: 69057 cgtcgacgtgcaggacctcctcggcaaggt 69086 Score = 109 bits (55), Expect = 2e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 186 ggcggctgtccgccgtccaggaaacgaaggaggaggaggcgaagacgaccgaggagctca 245 ||||||| |||||||| ||||| || ||||||| |||||| ||||| |||||||| ||| Sbjct: 68720 ggcggctctccgccgtgcaggagaccaaggagggggaggcccagacggccgaggagatca 68779 Query: 246 cggagaagtacggcctcgagttcggcctctggaaa 280 | ||||||||||||||||||||||||||||||||| Sbjct: 68780 ccgagaagtacggcctcgagttcggcctctggaaa 68814