BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem118m16 (988 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001048992.1| Oryza sativa (japonica cultivar-group) Os01g... 163 2e-36 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic D... 163 2e-36 dbj|AK100398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 163 2e-36 >ref|NM_001048992.1| Oryza sativa (japonica cultivar-group) Os01g0225100 (Os01g0225100) mRNA, complete cds Length = 3420 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 392 gcctccaccgcgtcttcgtcggccacgggagacgagcggcgcgacctcgcgtggctgttc 451 |||||||||||||| ||||||||| | || ||||||||||||||| | ||||||||| | Sbjct: 313 gcctccaccgcgtcgtcgtcggccgccggcgacgagcggcgcgacatggcgtggctgctg 372 Query: 452 aacgctttcggcagcgccacaatcgaccaggtggactccgcctaccgggaggccggcggc 511 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 373 gacgccttcggcaccgccacgatcgaccaggtggactccgcctaccgcgaggccggcggc 432 Query: 512 gatccctttctcgcggccggcatcct 537 || |||| ||||||||||||||||| Sbjct: 433 gacgccttcctcgcggccggcatcct 458 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 777 gtggtgaccgaaagtgtaatgttgaagaggccgaacagttcctatgctccatgcttgggg 836 |||| ||||| |||| || ||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 683 gtggcgaccgcaagtatagtgttgaagaggccgagcagttcctgtgctctatgctggggg 742 Query: 837 ataattcggagctcagcatgggtgtggttagagacgtgctcggt 880 ||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 743 ataattcggagcttggcatgggtgtggtcagagacgtgctcggt 786 Score = 87.7 bits (44), Expect = 8e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 563 ccggatctctcgccgcgcgcggtatctggcgggaggaaggccgctcgcaggccaaagagg 622 ||||||||||||||||| || | |||||| || ||||||||| | ||||| |||| | Sbjct: 502 ccggatctctcgccgcgggccggatctggtggcaggaaggccagcaggaggccgaagaag 561 Query: 623 gttgccgtggccgtaaccggcatggtcgcggacgtgattggcaagggctacacgcggcct 682 || |||||||| | ||||| ||||| ||||||||||| || |||| |||||||| ||| Sbjct: 562 gtagccgtggctgcgaccgggatggttgcggacgtgatcggtaaggcgtacacgcgacct 621 Query: 683 gccacttcgcccgtaa 698 |||||||||||||||| Sbjct: 622 gccacttcgcccgtaa 637 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 392 gcctccaccgcgtcttcgtcggccacgggagacgagcggcgcgacctcgcgtggctgttc 451 |||||||||||||| ||||||||| | || ||||||||||||||| | ||||||||| | Sbjct: 6888756 gcctccaccgcgtcgtcgtcggccgccggcgacgagcggcgcgacatggcgtggctgctg 6888815 Query: 452 aacgctttcggcagcgccacaatcgaccaggtggactccgcctaccgggaggccggcggc 511 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 6888816 gacgccttcggcaccgccacgatcgaccaggtggactccgcctaccgcgaggccggcggc 6888875 Query: 512 gatccctttctcgcggccggcatcct 537 || |||| ||||||||||||||||| Sbjct: 6888876 gacgccttcctcgcggccggcatcct 6888901 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 777 gtggtgaccgaaagtgtaatgttgaagaggccgaacagttcctatgctccatgcttgggg 836 |||| ||||| |||| || ||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 6889126 gtggcgaccgcaagtatagtgttgaagaggccgagcagttcctgtgctctatgctggggg 6889185 Query: 837 ataattcggagctcagcatgggtgtggttagagacgtgctcggt 880 ||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 6889186 ataattcggagcttggcatgggtgtggtcagagacgtgctcggt 6889229 Score = 87.7 bits (44), Expect = 8e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 563 ccggatctctcgccgcgcgcggtatctggcgggaggaaggccgctcgcaggccaaagagg 622 ||||||||||||||||| || | |||||| || ||||||||| | ||||| |||| | Sbjct: 6888945 ccggatctctcgccgcgggccggatctggtggcaggaaggccagcaggaggccgaagaag 6889004 Query: 623 gttgccgtggccgtaaccggcatggtcgcggacgtgattggcaagggctacacgcggcct 682 || |||||||| | ||||| ||||| ||||||||||| || |||| |||||||| ||| Sbjct: 6889005 gtagccgtggctgcgaccgggatggttgcggacgtgatcggtaaggcgtacacgcgacct 6889064 Query: 683 gccacttcgcccgtaa 698 |||||||||||||||| Sbjct: 6889065 gccacttcgcccgtaa 6889080 >dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 392 gcctccaccgcgtcttcgtcggccacgggagacgagcggcgcgacctcgcgtggctgttc 451 |||||||||||||| ||||||||| | || ||||||||||||||| | ||||||||| | Sbjct: 56480 gcctccaccgcgtcgtcgtcggccgccggcgacgagcggcgcgacatggcgtggctgctg 56539 Query: 452 aacgctttcggcagcgccacaatcgaccaggtggactccgcctaccgggaggccggcggc 511 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 56540 gacgccttcggcaccgccacgatcgaccaggtggactccgcctaccgcgaggccggcggc 56599 Query: 512 gatccctttctcgcggccggcatcct 537 || |||| ||||||||||||||||| Sbjct: 56600 gacgccttcctcgcggccggcatcct 56625 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 777 gtggtgaccgaaagtgtaatgttgaagaggccgaacagttcctatgctccatgcttgggg 836 |||| ||||| |||| || ||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 56850 gtggcgaccgcaagtatagtgttgaagaggccgagcagttcctgtgctctatgctggggg 56909 Query: 837 ataattcggagctcagcatgggtgtggttagagacgtgctcggt 880 ||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 56910 ataattcggagcttggcatgggtgtggtcagagacgtgctcggt 56953 Score = 87.7 bits (44), Expect = 8e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 563 ccggatctctcgccgcgcgcggtatctggcgggaggaaggccgctcgcaggccaaagagg 622 ||||||||||||||||| || | |||||| || ||||||||| | ||||| |||| | Sbjct: 56669 ccggatctctcgccgcgggccggatctggtggcaggaaggccagcaggaggccgaagaag 56728 Query: 623 gttgccgtggccgtaaccggcatggtcgcggacgtgattggcaagggctacacgcggcct 682 || |||||||| | ||||| ||||| ||||||||||| || |||| |||||||| ||| Sbjct: 56729 gtagccgtggctgcgaccgggatggttgcggacgtgatcggtaaggcgtacacgcgacct 56788 Query: 683 gccacttcgcccgtaa 698 |||||||||||||||| Sbjct: 56789 gccacttcgcccgtaa 56804 >dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 392 gcctccaccgcgtcttcgtcggccacgggagacgagcggcgcgacctcgcgtggctgttc 451 |||||||||||||| ||||||||| | || ||||||||||||||| | ||||||||| | Sbjct: 10574 gcctccaccgcgtcgtcgtcggccgccggcgacgagcggcgcgacatggcgtggctgctg 10633 Query: 452 aacgctttcggcagcgccacaatcgaccaggtggactccgcctaccgggaggccggcggc 511 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 10634 gacgccttcggcaccgccacgatcgaccaggtggactccgcctaccgcgaggccggcggc 10693 Query: 512 gatccctttctcgcggccggcatcct 537 || |||| ||||||||||||||||| Sbjct: 10694 gacgccttcctcgcggccggcatcct 10719 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 777 gtggtgaccgaaagtgtaatgttgaagaggccgaacagttcctatgctccatgcttgggg 836 |||| ||||| |||| || ||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 10944 gtggcgaccgcaagtatagtgttgaagaggccgagcagttcctgtgctctatgctggggg 11003 Query: 837 ataattcggagctcagcatgggtgtggttagagacgtgctcggt 880 ||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 11004 ataattcggagcttggcatgggtgtggtcagagacgtgctcggt 11047 Score = 87.7 bits (44), Expect = 8e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 563 ccggatctctcgccgcgcgcggtatctggcgggaggaaggccgctcgcaggccaaagagg 622 ||||||||||||||||| || | |||||| || ||||||||| | ||||| |||| | Sbjct: 10763 ccggatctctcgccgcgggccggatctggtggcaggaaggccagcaggaggccgaagaag 10822 Query: 623 gttgccgtggccgtaaccggcatggtcgcggacgtgattggcaagggctacacgcggcct 682 || |||||||| | ||||| ||||| ||||||||||| || |||| |||||||| ||| Sbjct: 10823 gtagccgtggctgcgaccgggatggttgcggacgtgatcggtaaggcgtacacgcgacct 10882 Query: 683 gccacttcgcccgtaa 698 |||||||||||||||| Sbjct: 10883 gccacttcgcccgtaa 10898 >dbj|AK100398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M16, full insert sequence Length = 3420 Score = 163 bits (82), Expect = 2e-36 Identities = 130/146 (89%) Strand = Plus / Plus Query: 392 gcctccaccgcgtcttcgtcggccacgggagacgagcggcgcgacctcgcgtggctgttc 451 |||||||||||||| ||||||||| | || ||||||||||||||| | ||||||||| | Sbjct: 313 gcctccaccgcgtcgtcgtcggccgccggcgacgagcggcgcgacatggcgtggctgctg 372 Query: 452 aacgctttcggcagcgccacaatcgaccaggtggactccgcctaccgggaggccggcggc 511 |||| ||||||| |||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 373 gacgccttcggcaccgccacgatcgaccaggtggactccgcctaccgcgaggccggcggc 432 Query: 512 gatccctttctcgcggccggcatcct 537 || |||| ||||||||||||||||| Sbjct: 433 gacgccttcctcgcggccggcatcct 458 Score = 119 bits (60), Expect = 2e-23 Identities = 93/104 (89%) Strand = Plus / Plus Query: 777 gtggtgaccgaaagtgtaatgttgaagaggccgaacagttcctatgctccatgcttgggg 836 |||| ||||| |||| || ||||||||||||||| |||||||| ||||| ||||| |||| Sbjct: 683 gtggcgaccgcaagtatagtgttgaagaggccgagcagttcctgtgctctatgctggggg 742 Query: 837 ataattcggagctcagcatgggtgtggttagagacgtgctcggt 880 ||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 743 ataattcggagcttggcatgggtgtggtcagagacgtgctcggt 786 Score = 87.7 bits (44), Expect = 8e-14 Identities = 113/136 (83%) Strand = Plus / Plus Query: 563 ccggatctctcgccgcgcgcggtatctggcgggaggaaggccgctcgcaggccaaagagg 622 ||||||||||||||||| || | |||||| || ||||||||| | ||||| |||| | Sbjct: 502 ccggatctctcgccgcgggccggatctggtggcaggaaggccagcaggaggccgaagaag 561 Query: 623 gttgccgtggccgtaaccggcatggtcgcggacgtgattggcaagggctacacgcggcct 682 || |||||||| | ||||| ||||| ||||||||||| || |||| |||||||| ||| Sbjct: 562 gtagccgtggctgcgaccgggatggttgcggacgtgatcggtaaggcgtacacgcgacct 621 Query: 683 gccacttcgcccgtaa 698 |||||||||||||||| Sbjct: 622 gccacttcgcccgtaa 637