BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem117j06 (944 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052032.1| Oryza sativa (japonica cultivar-group) Os01g... 406 e-110 dbj|AK108889.1| Oryza sativa (japonica cultivar-group) cDNA clon... 406 e-110 emb|CT831348.1| Oryza sativa (indica cultivar-group) cDNA clone:... 398 e-107 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 226 1e-55 dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic D... 226 1e-55 >ref|NM_001052032.1| Oryza sativa (japonica cultivar-group) Os01g0965900 (Os01g0965900) mRNA, complete cds Length = 1015 Score = 406 bits (205), Expect = e-110 Identities = 391/453 (86%) Strand = Plus / Plus Query: 274 catcatgccgcatctcctcaacttatacgggtcttgcgcgacggctcgggactttgagat 333 |||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 244 catcatgccgcatctcctcaacatatacggatcgtgcgcgacggctcgggacttcgagat 303 Query: 334 ttacgcgcgacatgcgacatttgaggacccgctcatgcgtgctcatggggtgaagcagat 393 ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 304 ttacgcggcgcatgccacattcgaggacccgcttatgcgagctcatggggttaagcagat 363 Query: 394 caaatcagccttttacacacttcctaaggtattccgtgaatccaaaattgtggagtacac 453 |||||| ||||| |||||||| || ||| ||||| ||||||||||||| ||||||||||| Sbjct: 364 caaatcggccttctacacactccccaagttattcggtgaatccaaaatcgtggagtacac 423 Query: 454 gatacaagaaaatgagataggaccgggaaaagttgagatactgatcgacaacaagcagca 513 || |||||| || | | || |||||||| |||||||||||||||||||||||||| Sbjct: 424 aattacagaaaacgaaaccgcgcccggaaaagtcgagatactgatcgacaacaagcagca 483 Query: 514 ttacaaggtggggggcaaggccgttgatctgacgtctctgatcactctcaacgtcgagga 573 |||||| | ||||| |||| | || ||| |||| || ||||| ||| |||||||||| Sbjct: 484 ctacaagttcctgggcagggccatcgacctggcgtcgctcatcacgctcgacgtcgagga 543 Query: 574 cggcaaggttgtcaagcatcgggactggtgggataagaagcctctgaagaacagggagac 633 |||||||||||| ||||| | ||||||||||| ||||||||||| ||||||||||| || Sbjct: 544 cggcaaggttgtgaagcaccaagactggtgggacaagaagcctctcaagaacagggacac 603 Query: 634 ggtgagcttcccgctggtggggcgactggcggaggcgagccgccggggagccatgctgct 693 ||||||||||||| |||| || || ||||||||||||| |||||| || ||||||||||| Sbjct: 604 ggtgagcttcccggtggtcggccggctggcggaggcgacccgccgcggcgccatgctgct 663 Query: 694 cacccacgccctcatgggcttcggcaaggaccc 726 ||| ||||| |||||||||| |||||||||||| Sbjct: 664 cactcacgctctcatgggctgcggcaaggaccc 696 >dbj|AK108889.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-E03, full insert sequence Length = 1015 Score = 406 bits (205), Expect = e-110 Identities = 391/453 (86%) Strand = Plus / Plus Query: 274 catcatgccgcatctcctcaacttatacgggtcttgcgcgacggctcgggactttgagat 333 |||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 244 catcatgccgcatctcctcaacatatacggatcgtgcgcgacggctcgggacttcgagat 303 Query: 334 ttacgcgcgacatgcgacatttgaggacccgctcatgcgtgctcatggggtgaagcagat 393 ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 304 ttacgcggcgcatgccacattcgaggacccgcttatgcgagctcatggggttaagcagat 363 Query: 394 caaatcagccttttacacacttcctaaggtattccgtgaatccaaaattgtggagtacac 453 |||||| ||||| |||||||| || ||| ||||| ||||||||||||| ||||||||||| Sbjct: 364 caaatcggccttctacacactccccaagttattcggtgaatccaaaatcgtggagtacac 423 Query: 454 gatacaagaaaatgagataggaccgggaaaagttgagatactgatcgacaacaagcagca 513 || |||||| || | | || |||||||| |||||||||||||||||||||||||| Sbjct: 424 aattacagaaaacgaaaccgcgcccggaaaagtcgagatactgatcgacaacaagcagca 483 Query: 514 ttacaaggtggggggcaaggccgttgatctgacgtctctgatcactctcaacgtcgagga 573 |||||| | ||||| |||| | || ||| |||| || ||||| ||| |||||||||| Sbjct: 484 ctacaagttcctgggcagggccatcgacctggcgtcgctcatcacgctcgacgtcgagga 543 Query: 574 cggcaaggttgtcaagcatcgggactggtgggataagaagcctctgaagaacagggagac 633 |||||||||||| ||||| | ||||||||||| ||||||||||| ||||||||||| || Sbjct: 544 cggcaaggttgtgaagcaccaagactggtgggacaagaagcctctcaagaacagggacac 603 Query: 634 ggtgagcttcccgctggtggggcgactggcggaggcgagccgccggggagccatgctgct 693 ||||||||||||| |||| || || ||||||||||||| |||||| || ||||||||||| Sbjct: 604 ggtgagcttcccggtggtcggccggctggcggaggcgacccgccgcggcgccatgctgct 663 Query: 694 cacccacgccctcatgggcttcggcaaggaccc 726 ||| ||||| |||||||||| |||||||||||| Sbjct: 664 cactcacgctctcatgggctgcggcaaggaccc 696 >emb|CT831348.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA015K14, full insert sequence Length = 949 Score = 398 bits (201), Expect = e-107 Identities = 390/453 (86%) Strand = Plus / Plus Query: 274 catcatgccgcatctcctcaacttatacgggtcttgcgcgacggctcgggactttgagat 333 |||||||||||||||||||||| ||||||| || |||||||||||||||||||| |||| Sbjct: 171 catcatgccgcatctcctcaacatatacggatcgtgcgcgacggctcgggacttccagat 230 Query: 334 ttacgcgcgacatgcgacatttgaggacccgctcatgcgtgctcatggggtgaagcagat 393 ||||||| ||||| ||||| ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 231 ttacgcggcgcatgccacattcgaggacccgcttatgcgagctcatggggttaagcagat 290 Query: 394 caaatcagccttttacacacttcctaaggtattccgtgaatccaaaattgtggagtacac 453 |||||| ||||| |||||||| || ||| ||||| ||||||||||||| ||||||||||| Sbjct: 291 caaatcggccttctacacactccccaagttattcggtgaatccaaaatcgtggagtacac 350 Query: 454 gatacaagaaaatgagataggaccgggaaaagttgagatactgatcgacaacaagcagca 513 || |||||| || | | || |||||||| |||||||||||||||||||||||||| Sbjct: 351 aattacagaaaacgaaaccgcgcccggaaaagtcgagatactgatcgacaacaagcagca 410 Query: 514 ttacaaggtggggggcaaggccgttgatctgacgtctctgatcactctcaacgtcgagga 573 |||||| | ||||| |||| | || ||| |||| || ||||| ||| |||||||||| Sbjct: 411 ctacaagttcctgggcagggccatcgacctggcgtcgctcatcacgctcgacgtcgagga 470 Query: 574 cggcaaggttgtcaagcatcgggactggtgggataagaagcctctgaagaacagggagac 633 |||||||||||| ||||| | ||||||||||| ||||||||||| ||||||||||| || Sbjct: 471 cggcaaggttgtgaagcaccaagactggtgggacaagaagcctctcaagaacagggacac 530 Query: 634 ggtgagcttcccgctggtggggcgactggcggaggcgagccgccggggagccatgctgct 693 ||||||||||||| |||| || || ||||||||||||| |||||| || ||||||||||| Sbjct: 531 ggtgagcttcccggtggtcggccggctggcggaggcgacccgccgcggcgccatgctgct 590 Query: 694 cacccacgccctcatgggcttcggcaaggaccc 726 ||| ||||| |||||||||| |||||||||||| Sbjct: 591 cactcacgctctcatgggctgcggcaaggaccc 623 >dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 226 bits (114), Expect = 1e-55 Identities = 207/238 (86%) Strand = Plus / Minus Query: 489 agatactgatcgacaacaagcagcattacaaggtggggggcaaggccgttgatctgacgt 548 ||||||||||||||||||||||||| |||||| | ||||| |||| | || ||| ||| Sbjct: 42580221 agatactgatcgacaacaagcagcactacaagttcctgggcagggccatcgacctggcgt 42580162 Query: 549 ctctgatcactctcaacgtcgaggacggcaaggttgtcaagcatcgggactggtgggata 608 | || ||||| ||| |||||||||||||||||||||| ||||| | ||||||||||| | Sbjct: 42580161 cgctcatcacgctcgacgtcgaggacggcaaggttgtgaagcaccaagactggtgggaca 42580102 Query: 609 agaagcctctgaagaacagggagacggtgagcttcccgctggtggggcgactggcggagg 668 |||||||||| ||||||||||| ||||||||||||||| |||| || || |||||||||| Sbjct: 42580101 agaagcctctcaagaacagggacacggtgagcttcccggtggtcggccggctggcggagg 42580042 Query: 669 cgagccgccggggagccatgctgctcacccacgccctcatgggcttcggcaaggaccc 726 ||| |||||| || |||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 42580041 cgacccgccgcggcgccatgctgctcactcacgctctcatgggctgcggcaaggaccc 42579984 Score = 89.7 bits (45), Expect = 2e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 298 atacgggtcttgcgcgacggctcgggactttgagatttacgcgcgacatgcgacatttga 357 |||||| || |||||||||||||||||||| |||||||||||| ||||| ||||| || Sbjct: 42582269 atacggatcgtgcgcgacggctcgggacttcgagatttacgcggcgcatgccacattcga 42582210 Query: 358 ggacccgctcatgcgtgctcatggg 382 ||||||||| ||||| ||||||||| Sbjct: 42582209 ggacccgcttatgcgagctcatggg 42582185 >dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 226 bits (114), Expect = 1e-55 Identities = 207/238 (86%) Strand = Plus / Minus Query: 489 agatactgatcgacaacaagcagcattacaaggtggggggcaaggccgttgatctgacgt 548 ||||||||||||||||||||||||| |||||| | ||||| |||| | || ||| ||| Sbjct: 101104 agatactgatcgacaacaagcagcactacaagttcctgggcagggccatcgacctggcgt 101045 Query: 549 ctctgatcactctcaacgtcgaggacggcaaggttgtcaagcatcgggactggtgggata 608 | || ||||| ||| |||||||||||||||||||||| ||||| | ||||||||||| | Sbjct: 101044 cgctcatcacgctcgacgtcgaggacggcaaggttgtgaagcaccaagactggtgggaca 100985 Query: 609 agaagcctctgaagaacagggagacggtgagcttcccgctggtggggcgactggcggagg 668 |||||||||| ||||||||||| ||||||||||||||| |||| || || |||||||||| Sbjct: 100984 agaagcctctcaagaacagggacacggtgagcttcccggtggtcggccggctggcggagg 100925 Query: 669 cgagccgccggggagccatgctgctcacccacgccctcatgggcttcggcaaggaccc 726 ||| |||||| || |||||||||||||| ||||| |||||||||| |||||||||||| Sbjct: 100924 cgacccgccgcggcgccatgctgctcactcacgctctcatgggctgcggcaaggaccc 100867 Score = 89.7 bits (45), Expect = 2e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 298 atacgggtcttgcgcgacggctcgggactttgagatttacgcgcgacatgcgacatttga 357 |||||| || |||||||||||||||||||| |||||||||||| ||||| ||||| || Sbjct: 103152 atacggatcgtgcgcgacggctcgggacttcgagatttacgcggcgcatgccacattcga 103093 Query: 358 ggacccgctcatgcgtgctcatggg 382 ||||||||| ||||| ||||||||| Sbjct: 103092 ggacccgcttatgcgagctcatggg 103068