BLASTN 2.2.17


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bphyem117b17
         (975 letters)

Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 
           5,422,427 sequences; 20,945,727,253 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NM_001070293.1| Oryza sativa (japonica cultivar-group) Os09g...   529   e-147
dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clon...   529   e-147
gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence...   529   e-147
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...   517   e-143
dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D...   517   e-143

>ref|NM_001070293.1| Oryza sativa (japonica cultivar-group) Os09g0532000 (Os09g0532000)
           mRNA, complete cds
          Length = 1376

 Score =  529 bits (267), Expect = e-147
 Identities = 338/362 (93%), Gaps = 6/362 (1%)
 Strand = Plus / Plus

                                                                       
Query: 409 tacgtcgtgccgacggcgaggctattcgagcaggcgatcttcgaggcgtcgaagctgaag 468
           ||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439

                                                                       
Query: 469 gtgctgttcctgggggtggacgaggagaagca------cccggggaagctgccgcggacg 522
           ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||
Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499

                                                                       
Query: 523 tacacgctgacgcatagcgacgtgacggcgaggctgacgctgaccgtgtcccacaccatc 582
           |||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559

                                                                       
Query: 583 aaccgcgcgcagatgcaggggtggtacaacatgctgcagcgcgacgaggtggtggccgag 642
           ||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619

                                                                       
Query: 643 tggaagaaggtgcagggccggatgtcgctgcacgtccactgccacatctccggcggccac 702
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679

                                                                       
Query: 703 ttcctcctcaaactcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 762
            |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739

             
Query: 763 gt 764
           ||
Sbjct: 740 gt 741


>dbj|AK105810.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B12, full
           insert sequence
          Length = 1376

 Score =  529 bits (267), Expect = e-147
 Identities = 338/362 (93%), Gaps = 6/362 (1%)
 Strand = Plus / Plus

                                                                       
Query: 409 tacgtcgtgccgacggcgaggctattcgagcaggcgatcttcgaggcgtcgaagctgaag 468
           ||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439

                                                                       
Query: 469 gtgctgttcctgggggtggacgaggagaagca------cccggggaagctgccgcggacg 522
           ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||
Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499

                                                                       
Query: 523 tacacgctgacgcatagcgacgtgacggcgaggctgacgctgaccgtgtcccacaccatc 582
           |||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559

                                                                       
Query: 583 aaccgcgcgcagatgcaggggtggtacaacatgctgcagcgcgacgaggtggtggccgag 642
           ||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619

                                                                       
Query: 643 tggaagaaggtgcagggccggatgtcgctgcacgtccactgccacatctccggcggccac 702
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679

                                                                       
Query: 703 ttcctcctcaaactcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 762
            |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739

             
Query: 763 gt 764
           ||
Sbjct: 740 gt 741


>gb|AY850134.1| Oryza sativa (japonica cultivar-group) senescence-inducible
           chloroplast stay-green protein (SGR) mRNA, complete cds;
           nuclear gene for chloroplast product
          Length = 1524

 Score =  529 bits (267), Expect = e-147
 Identities = 338/362 (93%), Gaps = 6/362 (1%)
 Strand = Plus / Plus

                                                                       
Query: 409 tacgtcgtgccgacggcgaggctattcgagcaggcgatcttcgaggcgtcgaagctgaag 468
           ||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct: 380 tacgtcgtgccgagggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaag 439

                                                                       
Query: 469 gtgctgttcctgggggtggacgaggagaagca------cccggggaagctgccgcggacg 522
           ||||||||||||||||||||||||||||||||      ||||||||||||||||||||||
Sbjct: 440 gtgctgttcctgggggtggacgaggagaagcaccagcacccggggaagctgccgcggacg 499

                                                                       
Query: 523 tacacgctgacgcatagcgacgtgacggcgaggctgacgctgaccgtgtcccacaccatc 582
           |||||||||||||| ||||||||||||||||||||||||||| | ||||| |||||||||
Sbjct: 500 tacacgctgacgcacagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatc 559

                                                                       
Query: 583 aaccgcgcgcagatgcaggggtggtacaacatgctgcagcgcgacgaggtggtggccgag 642
           ||||| |||||| |||||||||||||||||| ||||||||| |||||||||||||| |||
Sbjct: 560 aaccgggcgcagctgcaggggtggtacaacaagctgcagcgggacgaggtggtggcggag 619

                                                                       
Query: 643 tggaagaaggtgcagggccggatgtcgctgcacgtccactgccacatctccggcggccac 702
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggaagaaggtgcagggccacatgtcgctgcacgtccactgccacatctccggcggccac 679

                                                                       
Query: 703 ttcctcctcaaactcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 762
            |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gtcctcctcgacctcatcgccggcctccgctactacatcttccgcaaggagctccccgtg 739

             
Query: 763 gt 764
           ||
Sbjct: 740 gt 741


>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score =  517 bits (261), Expect = e-143
 Identities = 329/352 (93%), Gaps = 6/352 (1%)
 Strand = Plus / Minus

                                                                            
Query: 423      ggcgaggctattcgagcaggcgatcttcgaggcgtcgaagctgaaggtgctgttcctggg 482
                ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20569186 ggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaaggtgctgttcctggg 20569127

                                                                            
Query: 483      ggtggacgaggagaagcacc------cggggaagctgccgcggacgtacacgctgacgca 536
                ||||||||||||||||||||      ||||||||||||||||||||||||||||||||||
Sbjct: 20569126 ggtggacgaggagaagcaccagcacccggggaagctgccgcggacgtacacgctgacgca 20569067

                                                                            
Query: 537      tagcgacgtgacggcgaggctgacgctgaccgtgtcccacaccatcaaccgcgcgcagat 596
                 ||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||| |
Sbjct: 20569066 cagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatcaaccgggcgcagct 20569007

                                                                            
Query: 597      gcaggggtggtacaacatgctgcagcgcgacgaggtggtggccgagtggaagaaggtgca 656
                ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 20569006 gcaggggtggtacaacaagctgcagcgggacgaggtggtggcggagtggaagaaggtgca 20568947

                                                                            
Query: 657      gggccggatgtcgctgcacgtccactgccacatctccggcggccacttcctcctcaaact 716
                |||||  ||||||||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 20568946 gggccacatgtcgctgcacgtccactgccacatctccggcggccacgtcctcctcgacct 20568887

                                                                    
Query: 717      catcgccggcctccgctactacatcttccgcaaggagctccccgtggtacgt 768
                ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20568886 catcgccggcctccgctactacatcttccgcaaggagctccccgtggtacgt 20568835


>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1254_E07
          Length = 124028

 Score =  517 bits (261), Expect = e-143
 Identities = 329/352 (93%), Gaps = 6/352 (1%)
 Strand = Plus / Minus

                                                                         
Query: 423   ggcgaggctattcgagcaggcgatcttcgaggcgtcgaagctgaaggtgctgttcctggg 482
             ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86833 ggcgaggctgttcgggccggcgatcttcgaggcgtcgaagctgaaggtgctgttcctggg 86774

                                                                         
Query: 483   ggtggacgaggagaagcacc------cggggaagctgccgcggacgtacacgctgacgca 536
             ||||||||||||||||||||      ||||||||||||||||||||||||||||||||||
Sbjct: 86773 ggtggacgaggagaagcaccagcacccggggaagctgccgcggacgtacacgctgacgca 86714

                                                                         
Query: 537   tagcgacgtgacggcgaggctgacgctgaccgtgtcccacaccatcaaccgcgcgcagat 596
              ||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||| |
Sbjct: 86713 cagcgacgtgacggcgaggctgacgctggcggtgtcgcacaccatcaaccgggcgcagct 86654

                                                                         
Query: 597   gcaggggtggtacaacatgctgcagcgcgacgaggtggtggccgagtggaagaaggtgca 656
             ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 86653 gcaggggtggtacaacaagctgcagcgggacgaggtggtggcggagtggaagaaggtgca 86594

                                                                         
Query: 657   gggccggatgtcgctgcacgtccactgccacatctccggcggccacttcctcctcaaact 716
             |||||  ||||||||||||||||||||||||||||||||||||||| |||||||| | ||
Sbjct: 86593 gggccacatgtcgctgcacgtccactgccacatctccggcggccacgtcctcctcgacct 86534

                                                                 
Query: 717   catcgccggcctccgctactacatcttccgcaaggagctccccgtggtacgt 768
             ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86533 catcgccggcctccgctactacatcttccgcaaggagctccccgtggtacgt 86482