BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem117b07 (1336 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052617.1| Oryza sativa (japonica cultivar-group) Os02g... 367 8e-98 dbj|AK111348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 367 8e-98 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 216 2e-52 dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 216 2e-52 ref|NM_001069751.1| Oryza sativa (japonica cultivar-group) Os09g... 153 2e-33 >ref|NM_001052617.1| Oryza sativa (japonica cultivar-group) Os02g0179200 (Os02g0179200) mRNA, complete cds Length = 1338 Score = 367 bits (185), Expect = 8e-98 Identities = 532/649 (81%), Gaps = 9/649 (1%) Strand = Plus / Plus Query: 117 gggaggcggtacgcgctgctgctagcgctgaacgactccgaatacgccaggaaggtgcac 176 |||||| |||||||||||||||| |||||||||||||| || ||||| ||||||||| || Sbjct: 132 gggaggaggtacgcgctgctgctggcgctgaacgactcggagtacgcgaggaaggtgtac 191 Query: 177 ggcggctactacaacgtcttcgtcgacgcgttcggcggcggcggc---------gagggc 227 ||||| ||| ||||||||||||| ||| |||||||||||||| |||| Sbjct: 192 ggcgggtacggcaacgtcttcgtctcggcgctcggcggcggcggcggcggaggggaggag 251 Query: 228 gagagctgggactgcttccgcgtcatcgaaggcgagttcccggccgcggaggacctcggc 287 ||||| |||||||||||||| || ||||| |||||||||||||| |||||||| | || Sbjct: 252 gagaggtgggactgcttccgggtgatcgacggcgagttcccggcggcggaggaggtgggg 311 Query: 288 cgctacgacggcttcgtcatcagcggcagcccgcacgacgcctacggcgacgacctgtgg 347 || ||||| || ||||| | |||||||||||||||||||| ||||||||||| | |||| Sbjct: 312 cggtacgaggggttcgtggtgagcggcagcccgcacgacgcgtacggcgacgagcggtgg 371 Query: 348 atcctccgcctgtgcctcctcatccagaccctccacgccatgaagaagctcctcctcggc 407 ||||||||||| ||| |||| ||| | | |||||||||||| |||| | |||||||| Sbjct: 372 atcctccgcctctgctccctcctccgggcgctccacgccatgggcaagcgcatcctcggc 431 Query: 408 atctgcttcggccaccaggttttgtgccgagcattggggggaagggttggcaagtcacgc 467 |||||||||||||||||||| ||||| ||||||||||| || || |||||||| |||| Sbjct: 432 atctgcttcggccaccaggtattgtgtcgagcattgggtggtagaattggcaaggcacga 491 Query: 468 agtggatgggacgtcggggtgaagaaggtgacctttgtgcaagatttggagggcttcaag 527 ||||||||| || | |||||||||||| |||||||||||| ||||| ||||| | |||| Sbjct: 492 agtggatggaacattggggtgaagaagatgacctttgtgcgtgattttgaggggtccaag 551 Query: 528 ctccttggggatctagaggtgctccctcggagcgcctccatcatcgaggttcaccaagac 587 | |||||||||| ||| | || | || |||||||||||||||||||||||||| Sbjct: 552 ttatttggggatctcaaggaaattccccaaagtgcctccatcatcgaggttcaccaagat 611 Query: 588 gaggtgtgggagataccaccgagggccaaggtgatcgcctactcggagaagacgagcgtg 647 ||||| | |||| | || || | || || |||| | |||||||| || |||||| ||| Sbjct: 612 gaggttttggaggtgcctccaatgggcagggtgttggcctactccgacaagacgccggtg 671 Query: 648 gaggtgttcgccgtcggcgagcatgtcctcggcatccagggccacccggagtacggcatc 707 ||| |||||||||||||||| |||| | |||||||||||||||||||||||| || Sbjct: 672 gagatgttcgccgtcggcgacaatgtgttgggcatccagggccacccggagtacaccagt 731 Query: 708 gacatcctgcacaacctcatcgaccgcctcgtcaacaacaacacaatca 756 |||||||| | ||||||||||||||| || ||||| |||||||| |||| Sbjct: 732 gacatcctcctcaacctcatcgaccgtcttgtcaataacaacaccatca 780 >dbj|AK111348.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-G04, full insert sequence Length = 1338 Score = 367 bits (185), Expect = 8e-98 Identities = 532/649 (81%), Gaps = 9/649 (1%) Strand = Plus / Plus Query: 117 gggaggcggtacgcgctgctgctagcgctgaacgactccgaatacgccaggaaggtgcac 176 |||||| |||||||||||||||| |||||||||||||| || ||||| ||||||||| || Sbjct: 132 gggaggaggtacgcgctgctgctggcgctgaacgactcggagtacgcgaggaaggtgtac 191 Query: 177 ggcggctactacaacgtcttcgtcgacgcgttcggcggcggcggc---------gagggc 227 ||||| ||| ||||||||||||| ||| |||||||||||||| |||| Sbjct: 192 ggcgggtacggcaacgtcttcgtctcggcgctcggcggcggcggcggcggaggggaggag 251 Query: 228 gagagctgggactgcttccgcgtcatcgaaggcgagttcccggccgcggaggacctcggc 287 ||||| |||||||||||||| || ||||| |||||||||||||| |||||||| | || Sbjct: 252 gagaggtgggactgcttccgggtgatcgacggcgagttcccggcggcggaggaggtgggg 311 Query: 288 cgctacgacggcttcgtcatcagcggcagcccgcacgacgcctacggcgacgacctgtgg 347 || ||||| || ||||| | |||||||||||||||||||| ||||||||||| | |||| Sbjct: 312 cggtacgaggggttcgtggtgagcggcagcccgcacgacgcgtacggcgacgagcggtgg 371 Query: 348 atcctccgcctgtgcctcctcatccagaccctccacgccatgaagaagctcctcctcggc 407 ||||||||||| ||| |||| ||| | | |||||||||||| |||| | |||||||| Sbjct: 372 atcctccgcctctgctccctcctccgggcgctccacgccatgggcaagcgcatcctcggc 431 Query: 408 atctgcttcggccaccaggttttgtgccgagcattggggggaagggttggcaagtcacgc 467 |||||||||||||||||||| ||||| ||||||||||| || || |||||||| |||| Sbjct: 432 atctgcttcggccaccaggtattgtgtcgagcattgggtggtagaattggcaaggcacga 491 Query: 468 agtggatgggacgtcggggtgaagaaggtgacctttgtgcaagatttggagggcttcaag 527 ||||||||| || | |||||||||||| |||||||||||| ||||| ||||| | |||| Sbjct: 492 agtggatggaacattggggtgaagaagatgacctttgtgcgtgattttgaggggtccaag 551 Query: 528 ctccttggggatctagaggtgctccctcggagcgcctccatcatcgaggttcaccaagac 587 | |||||||||| ||| | || | || |||||||||||||||||||||||||| Sbjct: 552 ttatttggggatctcaaggaaattccccaaagtgcctccatcatcgaggttcaccaagat 611 Query: 588 gaggtgtgggagataccaccgagggccaaggtgatcgcctactcggagaagacgagcgtg 647 ||||| | |||| | || || | || || |||| | |||||||| || |||||| ||| Sbjct: 612 gaggttttggaggtgcctccaatgggcagggtgttggcctactccgacaagacgccggtg 671 Query: 648 gaggtgttcgccgtcggcgagcatgtcctcggcatccagggccacccggagtacggcatc 707 ||| |||||||||||||||| |||| | |||||||||||||||||||||||| || Sbjct: 672 gagatgttcgccgtcggcgacaatgtgttgggcatccagggccacccggagtacaccagt 731 Query: 708 gacatcctgcacaacctcatcgaccgcctcgtcaacaacaacacaatca 756 |||||||| | ||||||||||||||| || ||||| |||||||| |||| Sbjct: 732 gacatcctcctcaacctcatcgaccgtcttgtcaataacaacaccatca 780 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 216 bits (109), Expect = 2e-52 Identities = 267/321 (83%), Gaps = 9/321 (2%) Strand = Plus / Minus Query: 117 gggaggcggtacgcgctgctgctagcgctgaacgactccgaatacgccaggaaggtgcac 176 |||||| |||||||||||||||| |||||||||||||| || ||||| ||||||||| || Sbjct: 4393430 gggaggaggtacgcgctgctgctggcgctgaacgactcggagtacgcgaggaaggtgtac 4393371 Query: 177 ggcggctactacaacgtcttcgtcgacgcgttcggcggcggcggc---------gagggc 227 ||||| ||| ||||||||||||| ||| |||||||||||||| |||| Sbjct: 4393370 ggcgggtacggcaacgtcttcgtctcggcgctcggcggcggcggcggcggaggggaggag 4393311 Query: 228 gagagctgggactgcttccgcgtcatcgaaggcgagttcccggccgcggaggacctcggc 287 ||||| |||||||||||||| || ||||| |||||||||||||| |||||||| | || Sbjct: 4393310 gagaggtgggactgcttccgggtgatcgacggcgagttcccggcggcggaggaggtgggg 4393251 Query: 288 cgctacgacggcttcgtcatcagcggcagcccgcacgacgcctacggcgacgacctgtgg 347 || ||||| || ||||| | |||||||||||||||||||| ||||||||||| | |||| Sbjct: 4393250 cggtacgaggggttcgtggtgagcggcagcccgcacgacgcgtacggcgacgagcggtgg 4393191 Query: 348 atcctccgcctgtgcctcctcatccagaccctccacgccatgaagaagctcctcctcggc 407 ||||||||||| ||| |||| ||| | | |||||||||||| |||| | |||||||| Sbjct: 4393190 atcctccgcctctgctccctcctccgggcgctccacgccatgggcaagcgcatcctcggc 4393131 Query: 408 atctgcttcggccaccaggtt 428 ||||||||||||||||||||| Sbjct: 4393130 atctgcttcggccaccaggtt 4393110 Score = 97.6 bits (49), Expect = 1e-16 Identities = 112/133 (84%) Strand = Plus / Minus Query: 624 gcctactcggagaagacgagcgtggaggtgttcgccgtcggcgagcatgtcctcggcatc 683 |||||||| || |||||| |||||| |||||||||||||||| |||| | |||||| Sbjct: 4391715 gcctactccgacaagacgccggtggagatgttcgccgtcggcgacaatgtgttgggcatc 4391656 Query: 684 cagggccacccggagtacggcatcgacatcctgcacaacctcatcgaccgcctcgtcaac 743 |||||||||||||||||| || |||||||| | ||||||||||||||| || ||||| Sbjct: 4391655 cagggccacccggagtacaccagtgacatcctcctcaacctcatcgaccgtcttgtcaat 4391596 Query: 744 aacaacacaatca 756 |||||||| |||| Sbjct: 4391595 aacaacaccatca 4391583 >dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0544B02 Length = 156339 Score = 216 bits (109), Expect = 2e-52 Identities = 267/321 (83%), Gaps = 9/321 (2%) Strand = Plus / Minus Query: 117 gggaggcggtacgcgctgctgctagcgctgaacgactccgaatacgccaggaaggtgcac 176 |||||| |||||||||||||||| |||||||||||||| || ||||| ||||||||| || Sbjct: 76994 gggaggaggtacgcgctgctgctggcgctgaacgactcggagtacgcgaggaaggtgtac 76935 Query: 177 ggcggctactacaacgtcttcgtcgacgcgttcggcggcggcggc---------gagggc 227 ||||| ||| ||||||||||||| ||| |||||||||||||| |||| Sbjct: 76934 ggcgggtacggcaacgtcttcgtctcggcgctcggcggcggcggcggcggaggggaggag 76875 Query: 228 gagagctgggactgcttccgcgtcatcgaaggcgagttcccggccgcggaggacctcggc 287 ||||| |||||||||||||| || ||||| |||||||||||||| |||||||| | || Sbjct: 76874 gagaggtgggactgcttccgggtgatcgacggcgagttcccggcggcggaggaggtgggg 76815 Query: 288 cgctacgacggcttcgtcatcagcggcagcccgcacgacgcctacggcgacgacctgtgg 347 || ||||| || ||||| | |||||||||||||||||||| ||||||||||| | |||| Sbjct: 76814 cggtacgaggggttcgtggtgagcggcagcccgcacgacgcgtacggcgacgagcggtgg 76755 Query: 348 atcctccgcctgtgcctcctcatccagaccctccacgccatgaagaagctcctcctcggc 407 ||||||||||| ||| |||| ||| | | |||||||||||| |||| | |||||||| Sbjct: 76754 atcctccgcctctgctccctcctccgggcgctccacgccatgggcaagcgcatcctcggc 76695 Query: 408 atctgcttcggccaccaggtt 428 ||||||||||||||||||||| Sbjct: 76694 atctgcttcggccaccaggtt 76674 Score = 97.6 bits (49), Expect = 1e-16 Identities = 112/133 (84%) Strand = Plus / Minus Query: 624 gcctactcggagaagacgagcgtggaggtgttcgccgtcggcgagcatgtcctcggcatc 683 |||||||| || |||||| |||||| |||||||||||||||| |||| | |||||| Sbjct: 75279 gcctactccgacaagacgccggtggagatgttcgccgtcggcgacaatgtgttgggcatc 75220 Query: 684 cagggccacccggagtacggcatcgacatcctgcacaacctcatcgaccgcctcgtcaac 743 |||||||||||||||||| || |||||||| | ||||||||||||||| || ||||| Sbjct: 75219 cagggccacccggagtacaccagtgacatcctcctcaacctcatcgaccgtcttgtcaat 75160 Query: 744 aacaacacaatca 756 |||||||| |||| Sbjct: 75159 aacaacaccatca 75147 >ref|NM_001069751.1| Oryza sativa (japonica cultivar-group) Os09g0424200 (Os09g0424200) mRNA, complete cds Length = 1294 Score = 153 bits (77), Expect = 2e-33 Identities = 122/137 (89%) Strand = Plus / Plus Query: 291 tacgacggcttcgtcatcagcggcagcccgcacgacgcctacggcgacgacctgtggatc 350 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 432 tacgacggcttcgtcatcagcggcagcccgcacgacgcgtacgccgacgacctgtggatc 491 Query: 351 ctccgcctgtgcctcctcatccagaccctccacgccatgaagaagctcctcctcggcatc 410 ||||| |||||||||||| ||| |||| ||||||| |||| |||||||||||| Sbjct: 492 ctccggctgtgcctcctcgtccgcgacctcgtcgccatgcgcaagcgtctcctcggcatc 551 Query: 411 tgcttcggccaccaggt 427 ||||||||||||||||| Sbjct: 552 tgcttcggccaccaggt 568