BLASTN 2.2.17 Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bphyem117b03 (1075 letters) Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) 5,422,427 sequences; 20,945,727,253 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NM_001052897.1| Oryza sativa (japonica cultivar-group) Os02g... 180 8e-42 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 180 8e-42 dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 180 8e-42 emb|CT836250.1| Oryza sativa (indica cultivar-group) cDNA clone:... 98 9e-17 ref|NM_001064383.1| Oryza sativa (japonica cultivar-group) Os06g... 98 9e-17 >ref|NM_001052897.1| Oryza sativa (japonica cultivar-group) Os02g0229800 (Os02g0229800) mRNA, complete cds Length = 882 Score = 180 bits (91), Expect = 8e-42 Identities = 148/167 (88%) Strand = Plus / Plus Query: 176 gcgtggcgcggcggctgtggcgggtggtgcgcgccgtgctctacatgctgcgccgtggcg 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| || || Sbjct: 44 gcgtggcgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgctgcggcgcgggc 103 Query: 236 tgggcgtgccgtccggccgcaagctcgccatggacctccacctcctcctccaccgcggca 295 || | ||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104 tgcaggcgccgtccgggcgcaagctcgccatggacctccacctcctcctccgccgcggca 163 Query: 296 aggtcgccggcaaggccctcagcgacctggtcaccttccatcaccac 342 || ||||||||||||| ||| || |||| ||||| ||||| |||||| Sbjct: 164 agatcgccggcaaggcgctcggccacctcgtcacgttccaccaccac 210 Score = 155 bits (78), Expect = 4e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 779 agcagcaggtggacaggaaagccgacgagttcatcaggaggttctacgagcagctgcgcg 838 ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 734 agcagcaggtggacaggaaggccgacgagttcatcaggcgcttctacgagcagctgcgcg 793 Query: 839 cgcagcagagcgtcgccgccacgccggactactacggc 876 |||||| |||||||||||||||||||||||||||||| Sbjct: 794 cgcagcgcagcgtcgccgccacgccggactactacggc 831 Score = 125 bits (63), Expect = 4e-25 Identities = 69/71 (97%) Strand = Plus / Plus Query: 567 ctacgacgcggccgacatcgccagggtgttcgagatgctcaacgacagcgagcacctctt 626 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 ctacgacgcggcctacgtcgccagggtgttcgagatgctcaacgacagcgagcacctctt 551 Query: 627 caacgacgacg 637 ||||||||||| Sbjct: 552 caacgacgacg 562 Score = 79.8 bits (40), Expect = 2e-11 Identities = 57/62 (91%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 419 acgagccctcgcgcggccg---ccgcgaggtcgagttcagctgcagcaacaccccctcct 475 |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 305 acgagccctcgcgcgggcgacgccgcgaggtcgagttcagctgcagcaacacgccctcct 364 Query: 476 cc 477 || Sbjct: 365 cc 366 >dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 180 bits (91), Expect = 8e-42 Identities = 148/167 (88%) Strand = Plus / Plus Query: 176 gcgtggcgcggcggctgtggcgggtggtgcgcgccgtgctctacatgctgcgccgtggcg 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| || || Sbjct: 7299728 gcgtggcgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgctgcggcgcgggc 7299787 Query: 236 tgggcgtgccgtccggccgcaagctcgccatggacctccacctcctcctccaccgcggca 295 || | ||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 7299788 tgcaggcgccgtccgggcgcaagctcgccatggacctccacctcctcctccgccgcggca 7299847 Query: 296 aggtcgccggcaaggccctcagcgacctggtcaccttccatcaccac 342 || ||||||||||||| ||| || |||| ||||| ||||| |||||| Sbjct: 7299848 agatcgccggcaaggcgctcggccacctcgtcacgttccaccaccac 7299894 Score = 155 bits (78), Expect = 4e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 779 agcagcaggtggacaggaaagccgacgagttcatcaggaggttctacgagcagctgcgcg 838 ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 7300418 agcagcaggtggacaggaaggccgacgagttcatcaggcgcttctacgagcagctgcgcg 7300477 Query: 839 cgcagcagagcgtcgccgccacgccggactactacggc 876 |||||| |||||||||||||||||||||||||||||| Sbjct: 7300478 cgcagcgcagcgtcgccgccacgccggactactacggc 7300515 Score = 125 bits (63), Expect = 4e-25 Identities = 69/71 (97%) Strand = Plus / Plus Query: 567 ctacgacgcggccgacatcgccagggtgttcgagatgctcaacgacagcgagcacctctt 626 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7300176 ctacgacgcggcctacgtcgccagggtgttcgagatgctcaacgacagcgagcacctctt 7300235 Query: 627 caacgacgacg 637 ||||||||||| Sbjct: 7300236 caacgacgacg 7300246 Score = 79.8 bits (40), Expect = 2e-11 Identities = 57/62 (91%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 419 acgagccctcgcgcggccg---ccgcgaggtcgagttcagctgcagcaacaccccctcct 475 |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 7299989 acgagccctcgcgcgggcgacgccgcgaggtcgagttcagctgcagcaacacgccctcct 7300048 Query: 476 cc 477 || Sbjct: 7300049 cc 7300050 >dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0035N08 Length = 136267 Score = 180 bits (91), Expect = 8e-42 Identities = 148/167 (88%) Strand = Plus / Plus Query: 176 gcgtggcgcggcggctgtggcgggtggtgcgcgccgtgctctacatgctgcgccgtggcg 235 |||||||||||||||||||||| ||||||||||||||||| ||||||||||| || || Sbjct: 75536 gcgtggcgcggcggctgtggcgcgtggtgcgcgccgtgctgtacatgctgcggcgcgggc 75595 Query: 236 tgggcgtgccgtccggccgcaagctcgccatggacctccacctcctcctccaccgcggca 295 || | ||||||||| |||||||||||||||||||||||||||||||||| |||||||| Sbjct: 75596 tgcaggcgccgtccgggcgcaagctcgccatggacctccacctcctcctccgccgcggca 75655 Query: 296 aggtcgccggcaaggccctcagcgacctggtcaccttccatcaccac 342 || ||||||||||||| ||| || |||| ||||| ||||| |||||| Sbjct: 75656 agatcgccggcaaggcgctcggccacctcgtcacgttccaccaccac 75702 Score = 155 bits (78), Expect = 4e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 779 agcagcaggtggacaggaaagccgacgagttcatcaggaggttctacgagcagctgcgcg 838 ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 76226 agcagcaggtggacaggaaggccgacgagttcatcaggcgcttctacgagcagctgcgcg 76285 Query: 839 cgcagcagagcgtcgccgccacgccggactactacggc 876 |||||| |||||||||||||||||||||||||||||| Sbjct: 76286 cgcagcgcagcgtcgccgccacgccggactactacggc 76323 Score = 125 bits (63), Expect = 4e-25 Identities = 69/71 (97%) Strand = Plus / Plus Query: 567 ctacgacgcggccgacatcgccagggtgttcgagatgctcaacgacagcgagcacctctt 626 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75984 ctacgacgcggcctacgtcgccagggtgttcgagatgctcaacgacagcgagcacctctt 76043 Query: 627 caacgacgacg 637 ||||||||||| Sbjct: 76044 caacgacgacg 76054 Score = 79.8 bits (40), Expect = 2e-11 Identities = 57/62 (91%), Gaps = 3/62 (4%) Strand = Plus / Plus Query: 419 acgagccctcgcgcggccg---ccgcgaggtcgagttcagctgcagcaacaccccctcct 475 |||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| Sbjct: 75797 acgagccctcgcgcgggcgacgccgcgaggtcgagttcagctgcagcaacacgccctcct 75856 Query: 476 cc 477 || Sbjct: 75857 cc 75858 >emb|CT836250.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA107H04, full insert sequence Length = 1221 Score = 97.6 bits (49), Expect = 9e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 256 aagctcgccatggacctccacctcctcctccaccgcggcaaggtcgccggcaa 308 |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 229 aagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 281 >ref|NM_001064383.1| Oryza sativa (japonica cultivar-group) Os06g0554600 (Os06g0554600) mRNA, complete cds Length = 801 Score = 97.6 bits (49), Expect = 9e-17 Identities = 52/53 (98%) Strand = Plus / Plus Query: 256 aagctcgccatggacctccacctcctcctccaccgcggcaaggtcgccggcaa 308 |||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 70 aagctcgccatggacctccacctcctcctccaccgcggcaagatcgccggcaa 122